Proton Transfer Mechanism Research Articles

Proton transfer driven by the fluctuation of water molecules in chitin film.

Proton-transfer mechanisms and hydration states were investigated in chitin films possessing the functionality of fuel-cell electrolytes. The absolute hydration number per chitin molecule (N) as a function of relative humidity (RH) was determined from the OH stretching bands of H2O molecules, and the proton conductivity was found to enhance above N = 2 (80%RH). The FIR spectrum at 500-900cm-1 for 20%RH (N < 1) together with first-principles calculations clearly shows that the w1 site has the same hydration strength as the w2 site. The molecular dynamics simulations for N = 2 demonstrate that H2O molecules with tiny fluctuations are localized on w1 and w2, and the hydrogen-bond (HB) network is formed via the CH2OH group of chitin molecules. Shrinkage of the O-O distance (dOO), which synchronizes with the barrier height, is required for proton transfer from H3O+ to adjacent CH2OH groups or H2O molecules. Nevertheless, dOO is hardly modulated for N = 2 because H2O molecules are strongly constrained on w1 and w2, and therefore, the transfer probability becomes small. For N = 3, novel HBs emerged between the additional H2O molecules broadly distributed on the w3 site and H2O molecules on w1 and w2. The transfer probability is enhanced because large fluctuations and diffusions in the whole H2O molecule yield large modulations of dOO. Consequently, long-range proton hopping is driven by the Zundel-type protonated hydrates in the water network.

Intermolecular Proton Transfer Enabled Reactive CO2 Capture by the Malononitrile Anion.

Task-specific ionic liquids (ILs) employing carbanions represent a new class of ILs for carbon capture. The deprotonated malononitrile carbanion, [CH(CN)2]-, has shown close to equimolar capacity for reactive CO2 capture. Although the formation of the [C(CN)2COOH]- carboxylic acid was found to be the final product, how the hydrogen atom on the [CH(CN)2]- carbanion transfers to the carboxylate group as a proton has not been fully understood. In this work, we employ density functional theory calculations with an implicit solvation model to investigate the proton transfer mechanisms in forming carboxylic acid from the reaction of the [CH(CN)2]- carbanion with CO2. We find that the intramolecular proton-transfer pathway in [CH(CN)2COO]- to form [C(CN)2COOH]- is unlikely due to the high energy barrier of 152 kJ/mol. Instead, the intermolecular proton transfer pathway between two [CH(CN)2COO]- anions is more feasible to form two molecules of [C(CN)2COOH]-, with a significantly lower activation energy of 50 kJ/mol. Moreover, the [C(CN)2COOH]- dimer is further stabilized by the intermolecular hydrogen bonds of the two -COOH groups in the Z-configuration of the π-conjugated planar geometry. This insight of reactive CO2 capture enabled by intermolecular proton transfer will be useful in designing novel carbanions and ILs for carbon capture and conversion.

Structural Landscape and Proton Conduction of Lanthanide 5-(Dihydroxyphosphoryl)isophthalates.

Metal phosphonate-carboxylate compounds represent a promising class of materials for proton conduction applications. This study investigates the structural, thermal, and proton conduction properties of three groups of lanthanide-based compounds derived from 5-(dihydroxyphosphoryl)isophthalic acid (PiPhtA). The crystal structures, solved ab initio from X-ray powder diffraction data, reveal that groups Ln-I, Ln[O3P-C6H3(COO)(COOH)(H2O)2] (Ln = La, Pr), and Ln-II, Ln2{[O3P-C6H3(COO)(COOH)]2(H2O)4}·2H2O (Ln = La, Pr, Eu), exhibit three-dimensional frameworks, while group Ln-III, Ln[O3P-C6H3(COO)(COOH)(H2O)] (Ln = Yb), adopts a layered structure with unbonded carboxylic groups oriented toward the interlayer region. All compounds feature carboxylic groups and coordinating water molecules. Impedance measurements demonstrate that these materials exhibit water-mediated proton conductivity, initially following a vehicle-type proton-transfer mechanism. Upon exposure to ammonia vapors from a 14 or 28% aqueous solution, compounds from groups II and III adsorb ammonia and water, leading to an enhancement in proton conductivity consistent with a Grotthuss-type proton-transfer mechanism. Notably, group II of the studied compounds undergoes the formation of a new expanded phase through the internal reaction of carboxylic groups with ammonia, coexisting with the as-synthesized phase. This postsynthetic modification results in a significant increase in proton conductivity, from approximately ∼5 × 10-6 to ∼10-4 S·cm-1 at 80 °C and 95% relative humidity (RH), attributed to a mixed intrinsic/extrinsic contribution. Remarkably, the NH3(28%)-exposed Yb-III compound achieves an enhancement in proton conductivity, reaching ∼ 5 × 10-3 S·cm-1 at 80 °C and 95% RH, primarily through an extrinsic contribution.

An effective strategy to enhance phosphoric acid retention and proton conductivity stability: Construction of proton transfer channels with starch rather than H3PO4

To enhance the phosphoric acid (PA) retention as well as maintain high proton conductivity of phosphoric acid doped proton exchange membranes at high temperature, we successfully design a series of phosphoric acid doped biobased composite membranes by incorporation of starch and graphene oxide (GO) into poly arylene ether ketones (PAEK). Proton transfer channels should be mainly built through dense hydrogen bonds formed from massive oxygen-containing groups of starch mainchain, which is confirmed by Molecular dynamics (MD) simulation, FT-IR and XRD analysis. The dense hydrogen-bond structure could construct fast proton transfer channels with extreme low doping level (0.00484 molH3PO4). The excellent PA retention properties with almost unchanged proton conductivity at high temperature (200 °C) for 600 min indicates that PA molecules are firmly fixed into membranes. Thus, in this study, we suggest a novel strategy for stablizing proton conductivity at high temperature and improving PA retention properties of PA doped membranes, which is building dense hydrogen-bond structure with low PA doping level.Based on the results in this study and the Grotthuss proton transfer mechanism, dense hydrogen-bonds from oxygen-containing groups in polymer backbones should be more stable than hydrogen-bonds from massive H3PO4 molecules with high acid doping levels to promote proton conduction.

First-Principles study on proton transfer in triazole molecules

Triazole can be used as an effective proton carrier because it has one proton donor and two proton acceptors. Density functional theory calculations were performed to explore the proton transfer mechanism of the triazole molecules in gas and solvents. We employed implicit solvent method to analyze the increase of proton donor–acceptor distance (PDAD) in proton transfer mechanism. The solvents reduce the relative energy in tautomers of 1,2,4-triazole molecules, and their protonated form. Proton transfer occurs only at symmetric pairs in the gas, small PDAD, whereas proton transfer in an asymmetric pair is possible in solvents as the PDAD increases.

Modulating the Leverage Relationship in Nitrogen Fixation Through Hydrogen‐Bond‐Regulated Proton Transfer

In the electrochemical nitrogen reduction reaction (NRR), a leverage relationship exists between NH3‐producing activity and selectivity because of the competing hydrogen evolution reaction (HER), which means that high activity with strong protons adsorption causes low product selectivity. Herein, we design a novel metal‐organic hydrogen bonding framework (MOHBF) material to modulate this leverage relationship by a hydrogen‐bond‐regulated proton transfer pathway. The MOHBF material was composited with reduced graphene oxide (rGO) to form a Ni‐N2O2 molecular catalyst (Ni‐N2O2/rGO). The unique structure of O atoms in Ni‐O‐C and N‐O‐H could form hydrogen bonds with H2O molecules to interfere with protons being directly adsorbed onto Ni active sites, thus regulating the proton transfer mechanism and slowing the HER kinetics, thereby modulating the leverage relationship. Moreover, this catalyst has abundant Ni‐single‐atom sites enriched with Ni‐N/O coordination, conducive to the adsorption and activation of N2. The Ni‐N2O2/rGO exhibits simultaneously enhanced activity and selectivity of NH3 production with a maximum NH3 yield rate of 209.7 μg h−1 mgcat.−1 and a Faradaic efficiency of 45.7%, outperforming other reported single‐atom NRR catalysts.

Theoretical study on the cascaded double proton transfer mechanism involving two adjacent hydrogen bonds in conjugated organic molecules

The cascaded double proton transfer reaction has attracted the interest of many researchers due to its effective six-level system cycle. Herein, the double proton transfer mechanism of naphthalene-based analog NDH and anthracene-based analog ADH in different solvents is investigated using density functional theory (DFT) and time-dependent density functional theory (TDDFT). The results indicate that the first occurrence of excited-state intramolecular proton transfer (ESIPT) in NDH and ADH is an ultrafast, barrierless process. Additionally, ADH undergoes a second ESIPT reaction, radiating a wider range of fluorescence spectrum. Theoretical studies reveal that this is due to the significantly increased hydrogen bond strength of ADH compared to NDH in the first excited (S1) state, creating favorable conditions for the second ESIPT. Analysis of electronic properties indicates that ADH exhibits enhanced chemical and kinetic activity, with a more pronounced intramolecular charge transfer (ICT), leading to increased stability of the keto structure (KB2*) after the second ESIPT. Finally, we identify the factors influencing the cascaded double proton transfer reaction. The second ESIPT process is promoted by extending the π-conjugated skeleton of the core molecule horizontally and leveraging the driving force provided by the H3 atom near the proton donor O3–H2. It is expected that these studies will provide theoretical guidance and new insights for the design and synthesis of near infrared (NIR) organic materials.

Zwitterionic Nanoconfined Proton‐Sieve: Charged Casing for Accelerating Proton Conduction

AbstractSince specifying the structure during operation tends to be challenging for intrinsically proton‐conducting polymers, it becomes increasingly essential to establish a well‐defined migration path in order to predict the proton conductivity. Zwitterion covalent organic frameworks (ziCOFs) provide a platform in crystal frameworks to investigate the proton transfer mechanism, considering their specific charged channel walls, deprotonation surface, and host–guest interactions. Here, a zwitterion nanoconfined proton‐sieves (ziNPS) with “charged casing” channel of charged pathways is proposed to demonstrate theoretically the effectiveness of proton conduction. Density functional theory and molecular dynamic simulation results show that the ziNPS with different anion groups all achieve a shorter hydrogen bond to increase the dense “hydronium‐water” domain, creating a channel of hydrogen bond networks to provide a long‐range pathway for the proton to migrate. As expected, the proton conductivity test by electrochemical impedance spectroscopy demonstrates the aforementioned concept as well. This research presents a fresh view of the ion conduction mechanism originating from localized zwitterionic units, which can apply to the fabrication of COF‐based proton conductors.

Theoretical investigation of the excited-state intramolecular double proton transfer process of 2,2'-(benzo[1,2-d:4,5-d']bis(thiazole)-2,6-diyl)diphenol.

In this work, the excited state intramolecular double proton transfer (ESIDPT) mechanism of 2,2'-(benzo[1,2-d:4,5-d']bis(thiazole)-2,6-diyl)diphenol (BTAP) is proposed using density functional theory (DFT) and time-dependent DFT (TDDFT). The changes in bond lengths, bond angles and IR vibrational spectra associated with two intramolecular hydrogen bonds of BTAP upon photoexcitation indicate that the hydrogen bonds are strengthened in the excited state, facilitating the ESIDPT process. Investigation of the constructed S1-state potential energy surface proposes that BTAP prefers a stepwise ESIDPT mechanism. Electronic spectra and frontier molecular orbitals (FMOs) are also presented to illustrate the luminescent properties of BTAP.

Ion Transfer Kinetics at the Tungsten Oxide Interface

Investigating the kinetics of interfacial ion transfer is imperative for the enhancement of electrochemical energy storage technologies, such as cation batteries. Consequently, we study the enigmatic proton transfer mechanisms that occur at solid-liquid interfaces to evaluate parameters that may modulate the optimization of battery efficiency. Utilizing electrochemical techniques, our objective is to deconvolute the mechanistic and rate-limiting factors associated with proton insertion from an acidic aqueous electrolyte into a thin film of tungsten trioxide (WO3). While WO3 has been investigated as a battery anode, the kinetics of cation insertion remain inadequately explored despite their effects on system efficiency. Through the Potentiostatic Intermittent Titration Technique (PITT), a developed application of chronoamperometry, along with Butler-Volmer equation fitting, our research endeavors to define the exchange current density and activation energy pertinent to cation insertion. The broader implications of exploring interfacial ion transfer phenomena manifest in advancing the fundamental understanding of energy storage processes.

Theoretical insights from computational analyses: solvent-polarity-associated excited state behaviours for the novel NP-BSD chemosensor

Given the potential luminous advantages of salicylideneaniline (SA) derivatives, in this work, the phenyl π-extension-bis(salicylidene)-1,5-diaminonaphthalene (NP-BSD) fluorophore is explored on its photo-induced reactional behaviours in solvents theoretically. Given solvent surroundings with different polarities, we studied the hydrogen-bonding interactions in different solvents and their influences on excited state proton transfer (ESPT) reaction by photoexcitation for NP-BSD fluorophore. First, photo-induced geometrical variations related to dual hydrogen bonds (O1-H2···N3 and O4-H5···N6) and infrared (IR) vibrational changes and qualitative chemical bond strength reveal excited-state hydrogen bonding enhancement. Probing into the photo-induced excitation process, the charge redistribution derived from vertical excitation confirms the tendency of ESIPT reaction for NP-BSD fluorophore. By constructing potential energy surfaces (PESs) in three aprotic polar solvents, the excited-state intramolecular double proton transfer (ESIDPT) mechanism of NP-BSD could be verified that could be regulated by solvent polarity. We clarify and present the solvent-polarity-associated ESIDPT behaviours for NP-BSD fluorophore.

Solvent polarity dependent photo-induced excited state intramolecular proton transfer for triphenylamine centered bis unsymmetrical azine (TPOV): A computational study

The exquisite, regulated characteristics of triphenylamine (TPA) derivatives have served as a profound inspiration in the photochemical field. Herein, the novel TPA-centered bis unsymmetrical azine (i.e., 3-methoxysalicylaldehyde substituted 4-((E)-hydrazonomethyl)-N-(4-((E)-hydrazonomethyl)phenyl)-N-phenylaniline (TPOV)) is investigated regarding its photo-induced behaviors and excited state intramolecular proton transfer (ESIPT) mechanisms. Solvent polar-dependent hydrogen bonding interactions and charge recombination, which is induced by photoexcitation, can greatly promote the ESIPT reactions of the TPOV chemosensor. In order to unveil the detailed excited state reaction mechanism, we theoretically construct the S0-state and S1-state of potential energy surfaces (PESs). Based on the S1-state PESs for TPOV in toluene, chloroform, and acetonitrile solvents, we unveil the single ESIPT reaction of TPOV that happens along with alternative dual intramolecular hydrogen bonds (O1-H2···N3 and O4-H5···N6). The solvent polarity-regulated excited state might clear the path for the creation of innovative luminescent materials.

Dynamics of proton tunneling in Hydrogen-Bonded systems through Green's function formalism

This study proposes a new theoretical model based on Green's function formalism for studying proton tunneling via hydrogen bonding. This approach allows calculating the tunneling probability and the tunneling energy that proton transfer occurs along a given path inferred a priori. The method is extended to multiple protons tunneling, characterizing the behaviour of some biological molecules. Specifically, the cases of the proton transfer in the Fujicurin A molecule and the double proton tunneling in the Guanine-Cytosine base-pair are investigated. The new approach is an alternative to those present in the literature. It allows straightforwardly predicting the mechanisms of intramolecular and intermolecular proton transfers involving the rearrangement of conjugated electrons.

Developing an ESIPT-based ratiometric fluorescent probe with fast-response for cellular imaging of hydrogen sulfide

Hydrogen sulfide (H2S) plays a crucial role in various physiological processes and is implicated in the pathogenesis of several diseases. The fluorescent probe (E)-2-(3-(3-(benzo[d]thiazol-2-yl)-2-hydroxy-5-methylstyryl)-5,5-dimethylcyclohex-2-en-1-ylidene) malononitrile (BTCMN) has been designed to image H2S in living cells using the excited-state intramolecular proton transfer (ESIPT) mechanism. This probe is developed by coupling 2-(2′-hydroxyphenyl) benzothiazole (HBT) with dicyanoisophorone through a H2S-responsive CC bond. Upon interaction with H2S, BTCMN exhibits a remarkable fluorescent change from red to green. BTCMN, which has shown exceptional performance in detecting hydrogen sulfide (H2S) with super-fast response times, large Stokes shifts (252 nm), specific selection towards H2S, and low detection limits. Importantly, BTCMN has been successfully used for visualizing endogenous and exogenous H2S in HepG2 cells with low cytotoxicity. These features collectively contribute to its effectiveness as a fluorescent probe for detecting H2S in living cells.

Synthesis and application of the AIE-ESIPT fluorescent probe for Cystiene detection: Crystal structure analysis and DFT calculation

Accurate detection of Cysteine (Cys) in cells is critical for clinical diagnosis and pathogen detection. It was of practical significance to develop fluorescent probes with specific recognition and rapid detection of Cys. Therefore, based on the nucleophile reaction and intramolecular cyclization reaction between biothiols and acrylates (AAS), a fluorescence probe, BTY-TPE-AAS, was designed and synthesized by combining the advantages of the Aggregation-Induced Emission (AIE) and Excited-State Intramolecular Proton Transfer (ESIPT) mechanisms. BTY-TPE-AAS could specifically detect Cys with a short detection time and strong anti-interference, which had important application value in the monitoring of Cys in the biomedical field. It provided some reference values for the design of a specific fluorescent probe for Cys detection.

Bright ESIPT emission from 2,6-di(thiazol/oxazol/imidazol-2-yl)phenol derivatives in solution, aggregation and solid states

Most luminophores often suffer from the problem of aggregation-caused quenching (ACQ) or fluorescence disappearance in dilute solution. It is significant to bridge the gap between ACQ and AIE. In this work, a facile but effective strategy was proposed for the fabrication of always-on luminophores based on the excited state intramolecular proton transfer (ESIPT) mechanism, and six luminophores emitting bright fluorescence in solution, aggregation and solid states were synthesized from 5-tert-butyl-2-hydroxyisophthalaldehyde. All these ESIPT systems show only keto emission owing to their congested structures which block the breakage of intramolecular hydrogen bond (O–H⋯N) by solvation, and subsequently make enol emission impossible. Three of these luminophores are prone to convert into the corresponding phenolate anions emitting blue-shifted emission, which enable them to sense pH variation in the weakly basic range. Furthermore, white-light emission was achieved by combining two of them which show complementary-color fluorescence, and one of them was utilized for bioimaging of living Hela cells and the high-resolution image was obtained.

Electronic and Nuclear Quantum Effects on Proton Transfer Reactions of Guanine-Thymine (G-T) Mispairs Using Combined Quantum Mechanical/Molecular Mechanical and Machine Learning Potentials.

Rare tautomeric forms of nucleobases can lead to Watson-Crick-like (WC-like) mispairs in DNA, but the process of proton transfer is fast and difficult to detect experimentally. NMR studies show evidence for the existence of short-time WC-like guanine-thymine (G-T) mispairs; however, the mechanism of proton transfer and the degree to which nuclear quantum effects play a role are unclear. We use a B-DNA helix exhibiting a wGT mispair as a model system to study tautomerization reactions. We perform ab initio (PBE0/6-31G*) quantum mechanical/molecular mechanical (QM/MM) simulations to examine the free energy surface for tautomerization. We demonstrate that while the ab initio QM/MM simulations are accurate, considerable sampling is required to achieve high precision in the free energy barriers. To address this problem, we develop a QM/MM machine learning potential correction (QM/MM-ΔMLP) that is able to improve the computational efficiency, greatly extend the accessible time scales of the simulations, and enable practical application of path integral molecular dynamics to examine nuclear quantum effects. We find that the inclusion of nuclear quantum effects has only a modest effect on the mechanistic pathway but leads to a considerable lowering of the free energy barrier for the GT*⇌G*T equilibrium. Our results enable a rationalization of observed experimental data and the prediction of populations of rare tautomeric forms of nucleobases and rates of their interconversion in B-DNA.

Confinement Effects on Proton Transfer in TiO2 Nanopores from Machine Learning Potential Molecular Dynamics Simulations.

Improved understanding of proton transfer in nanopores is critical for a wide range of emerging applications, yet experimentally probing mechanisms and energetics of this process remains a significant challenge. To help reveal details of this process, we developed and applied a machine learning potential derived from first-principles calculations to examine water reactivity and proton transfer in TiO2 slit-pores. We find that confinement of water within pores smaller than 0.5 nm imposes strong and complex effects on water reactivity and proton transfer. Although the proton transfer mechanism is similar to that at a TiO2 interface with bulk water, confinement reduces the activation energy of this process, leading to more frequent proton transfer events. This enhanced proton transfer stems from the contraction of oxygen-oxygen distances dictated by the interplay between confinement and hydrophilic interactions. Our simulations also highlight the importance of the surface topology, where faster proton transport is found in the direction where a unique arrangement of surface oxygens enables the formation of an ordered water chain. In a broader context, our study demonstrates that proton transfer in hydrophilic nanopores can be enhanced by controlling pore size, surface chemistry, and topology.

Visible Light-Driven Hydrogen Evolution Catalysis by Heteroleptic Ni(II) Complexes with Chelating Nitrogen Ligands: Probing Ligand Substituent Position and Photosensitizer Effects

This study aims to advance the field of green chemistry and catalysis by exploring alternatives to conventional non-renewable energy sources. Emphasis is placed on hydrogen as a potential fuel, with a focus on the catalytic properties of Ni(II) complexes when coordinated with o-phenylenediamine and diimine ligands. We report the synthesis and comprehensive characterization, with various physical and spectroscopic techniques, of three heteroleptic Ni(II) complexes: [Ni(1,10-phenanthroline)(o-phenylene diamine)] (1), [Ni(2,2-dimethyl-2,2-bipyridine)(o-phenylene diamine)] (2), and [Ni(5,5-dimethyl-2,2-bipyridine)(o-phenylene diamine)] (3). The catalytic activity of these complexes for hydrogen evolution was assessed through photochemical studies utilizing visible light irradiation. Two distinct photosensitizers, fluorescein and quantum dots, were examined under diverse conditions. Additionally, their electrocatalytic behavior was investigated to elucidate the hydrogen evolution reaction (HER) mechanism, revealing a combined proton-coupled electron transfer (PCET)/electron-coupled proton transfer (ECPT) mechanism attributed to the chemical nature of the diamine ligand. The influence of ligand substituent position, ligand chemical nature, and photosensitizer type on catalytic performance was systematically studied. Among the complexes investigated, complex 2 demonstrated superior catalytic performance, achieving a turnover number (TON) of 3357 in photochemical experiments using fluorescein as a photosensitizer. Conversely, complex 1 exhibited the highest TON of 30,066 for HER when quantum dots were employed as the photosensitizer.

Two co-existing and opposing mechanisms of proton transfer in one-dimensional open-end water chains.

The proton transport in one-dimensional (1D) confined water chains has been extensively studied as a model for ion channels in cell membrane and fuel cell. However, the mechanistic understanding of the proton transfer (PT) process in 1D water chains remains incomplete. In this study, we demonstrate that the two limiting structures of the hydrated excess proton, H5O2+ (Zundel) and H3O+ (linear H7O3+), undergo a change in dominance as the water chain grows, causing two co-existing and opposing PT mechanisms. Specifically, H5O2+ is stable in the middle of the chain, whereas H3O+ serves as a transition state (TS). Except for this region, H3O+ is stabilized while H5O2+ serves as a TS. The interaction analysis shows that the electrostatic interaction plays a crucial role in the difference in PT mechanisms. Our work fills a knowledge gap between the various PT mechanisms reported in bulk water and long 1D water chains, contributing to a deeper understanding of biological ion channels at the atomic level.