Understanding the trophic ecology of fish and how they use resources in space and time is important to support conservation and management actions. The trophic ecology of Brycon henni in the Nare and Guatapé rivers, Magdalena river basin, Colombia was determined. Five field samplings were carried out between October 2007 and January 2010, in rainy, dry, and dry-to-rainy transition periods. Stomachs of 262 specimens were collected. A Kruskall-Wallis analysis and a Mann-Whitney pairwise comparison test was performed to detect differences in the alimentary importance index of each food category between sex, size class, hydrological period and basins (Nare vs Guatapé). The Levin’s Measure of Niche Breadth and the Morisita’s Diet Overlapping Index were calculated to establish differences between size class in the different hydrological periods. Vegetable material was the most important food item, followed by Insecta, and fish. Individuals from Guatapé basin consumed more plant material and fish and fewer insects. We observed increased consumption of plant material and fish in ontogeny. Levin's niche breadth was lower and diet overlapping between individuals of length classes was higher during rainy period because the diet was mainly based on plant material. The diet of B. henni was composed mainly of plant material and Insects, and to a lesser extent from other groups such as fish, crustaceans and arachnids.