The fluid activity in the deep strata of sedimentary basins is commonly related to tectonic activity, and the cements filled in fractures are a good carrier for the tectonic-fluid coupling evolution. Compared to macrofractures, microfractures have characteristics of high frequency and easy identifiable periods. Abundant microfractures infilled by carbonate cements (MCCFs) developed in carbonates of the Ordovician Yingshan and Yijianfang formations in the platform basin area of the Tarim Basin. Based on the study of petrology, U-Pb dating, and geochemical characteristics, this study determined the stages of MCCFs and clarified the tectonic-fluid coupling evolution process recorded by MCCFs in the study area. The formation order of these MCCFs is D1, C1, C2, D2, C3, and C4. The precipitation times of MCCFs have a good correspondence with orogeny around the Tarim Basin and active times of strike-slip faults in the platform basin area. The six stages of MCCFs in the Ordovician Yingshan and Yijianfang formations in the SLU recorded the tectonic-fluid coupling evolution process of concentrated seawater in the late Middle Ordovician, meteoric water at late Ordovician, organic acids during the Silurian, Mg-rich hot brine at the end Devonian-early Carboniferous, and magmatic hydrothermal fluids during the Permian. This not only indicates a close connection between fluid activity and tectonic activity in sedimentary basins, but also confirms that the formation of MCCFs in carbonate formations is closely related to regional tectonic-fluid coupling activities. This study provides a good example for studying macro scale tectonic-fluid coupling activities in basins using microfractures.