Lowland Populations Research Articles

Alien Rainbow Trout Oncorhynchus mykiss in the Balkhash Basin (Kazakhstan, Central Asia): 50 Years of Naturalization.

Rainbow trout, or mykiss (Oncorhynchus mykiss), is one of the most popular species used in aquaculture and has been naturalized worldwide, including in the Central Asian Balkhash basin, which has unique aboriginal fish fauna. Both rainbow trout from European farms and wild mykiss from Kamchatka were introduced to some mountain lakes and rivers of the Balkhash basin about 50 years ago. This study investigates the current distribution and life history traits of the alien species and its possible impact on the local fish fauna. This study showed that the rainbow trout occupies various habitats in the Ili River basin: mountain lakes, fast-flowing mountain rivers, and lowland rivers with slow currents and warm water (up to +27 °C). Rainbow trout from European fish farms dominate the mountain Middle Kolsay Lake, while the wild trout from Kamchatka occupies the small Ulken Kokpak River. Both co-occur in the Chilik River. Contrary to that in other regions, the distribution of rainbow trout in the Balkhash basin remained almost the same after their introduction. Broad intrapopulation variability in terms of size, growth rate, and maturation age was revealed, apparently as a result of adaptation to the new environment and intrapopulation competition. In particular, the growth rate has decreased, but life span, surprisingly, has increased as compared to the originally introduced fish. Intrapopulation variation in growth and maturity patterns was also noted. Differences in skin coloration between highland (cold-water) and lowland (warm-water) populations were discovered. The feeding mode of naturalized trout is insectivorous (insect imago), indicating that it occupies its own niche in the local fish communities. The largest population of rainbow trout was recorded in the Lower Kolsay Lake, lowering the population of native fish species, while in other localities, no negative impact on local fish communities was recorded.

Landscape Heterogeneity Drives Genetic Diversity in the Highly Dispersive Moss Funaria hygrometrica Hedw.

Funaria hygrometrica, a cosmopolitan moss species known for its remarkable dispersal capacity, was selected as the focal organism to investigate the relationship between landscape features and genetic diversity. Our study encompassed samples collected from two distinct regions: the Spanish Sierra Nevada Mountains (SN), characterized by a diverse landscape with an altitudinal difference of nearly 3500 m within a short distance, and the Murcia Region (MU) in Southeast Spain, characterized by a uniform landscape akin to the lowlands of Sierra Nevada. Genotyping analysis targeted three genetic regions: the nuclear ribosomal internal transcribed spacer (nrITS), the chloroplast rps3-rpl16 region, and the mitochondrial rpl5-rpl16 spacer. Through this analysis, we aimed to assess genetic variability and population structure across these environmentally contrasting regions. The Sierra Nevada populations exhibited significantly higher haplotype diversity (Hd = 0.78 in the highlands and 0.67 overall) and nucleotide diversity (π% = 0.51 for ITS1) compared to the Murcia populations (Hd = 0.35, π% = 0.14). Further investigation unveiled that samples from the lowlands of Sierra Nevada showed a closer genetic affinity to Murcia than to the highlands of Sierra Nevada. Furthermore, the genetic differentiation between highland and lowland populations was significant (ΦST = 0.55), with partial Mantel tests and ResistanceGA analysis revealing a strong correlation between ITS1-based genetic diversity and landscape features, including altitude and bioclimatic variables. Our study elucidated potential explanations for the observed genetic structuring within F. hygrometrica samples' populations. These included factors such as a high selfing rate within restricted habitats, a limited average dispersal distance of spores, hybrid depression affecting partially incompatible genetic lineages, and recent migration facilitated via human activities into formerly unoccupied areas of the dry zones of Southeast Spain.

Seasonal and between-population variation in heat tolerance and cooling efficiency in a Mediterranean songbird

Discrete populations of widely distributed species may inhabit areas with marked differences in climatic conditions across geographic and seasonal scales, which could result in intraspecific variation in thermal physiology reflecting genetic adaptation, phenotypic plasticity, or both. However, few studies have evaluated inter-population variation in physiological responses to heat. We evaluated within- and inter-population seasonal variation in heat tolerance, cooling efficiency and other key thermoregulatory traits in two Mediterranean populations of Great tit Parus major experiencing contrasting thermal environments: a lowland population subject to hotter summers and a higher annual thermal amplitude than a montane population. Specifically, we measured heat tolerance limits (HTL), body temperature, resting metabolic rate, evaporative water loss, and evaporative cooling efficiency (the ratio between evaporative heat loss to metabolic heat production) within and above the thermoneutral zone during winter and summer. Heat tolerance during summer was greater in lowland than in montane birds; indeed, lowland birds seasonally increased this trait to a significant level, while montane ones did to a lesser extent. Besides, lowland birds showed greater evaporative cooling efficiency during summer (possibly due in part to reductions in total endogenous heat load), while surprisingly montane ones showed the opposite trend. Thus, lowland birds displayed greater seasonal flexibility in HTL, body temperature and resting metabolic rate above thermoneutrality, thus giving some support to the climatic variability hypothesis — that flexibility in thermoregulatory traits should increase with climatic variability. Our results partially support the idea that songbirds’ adaptive thermoregulation in the heat is flexible, highlighting the importance of considering intraspecific variation in thermoregulatory traits when modelling the future distribution and persistence of species under different climate change scenarios.

Management lessons from a long‐term captive‐breeding program for a critically endangered species, Leadbeater's possum, Gymnobelideus leadbeateri

AbstractLeadbeater's possums (Gymnobelideus leadbeateri) are a critically endangered marsupial found in a restricted area of cold, wet forest in South‐Eastern Australia. The majority of Leadbeater's possums inhabit highland forest, with one outlying lowland population. In 2012, a breeding program was established for the lowland Leadbeater's possums when this genetically distinct population faced imminent extinction. Successful reproduction by highland Leadbeater's possums in the international zoo‐based population between 1970 and 2010 led to the widespread belief that the species bred readily in captivity. Lowland possums have not bred in the 2012–2021 contemporary captive conservation breeding program. This study reviewed the historic captive‐breeding data and found that of the 84% (162/194) that reached reproductive maturity; 37% of males (n = 30) and 39.5% of females (n = 32) bred, and this success was highly skewed towards a subset of highly fecund individuals (14% of females and 15% of males produced 75% and 80% of all offspring). Although lack of reproductive output in the captive lowland animals could be explained if age at mortality was lower than that of highlands possums, comparison of the longevity of highland and lowland animals had no significant difference. Conservation objectives that specify how captive breeding may support in situ recovery of wild populations are integral to the success of captive programs. A lack of reflective analysis of past husbandry records allowed misconceptions of success and approaches implemented in the management of the breeding program, reducing the benefits for the conservation of this high profile threatened species. This case study provides a lesson for the management of conservation breeding programs and illustrates the importance of well‐defined conservation objectives, integration of in situ and ex situ strategies, and the importance of objective, systematic and timely analysis of available evidence to inform management objectives and improve conservation outcomes in real time.

Population status of the highly endangered Lycaena helle (Papilionoidea, Lycaenidae) in the Šumava Mts. two decades after establishment

The process of translocation of endangered species represents a useful conservation tool, but subsequent monitoring of translocated populations is often neglected, although it may supply critical information for conservation work. The EU-protected glacial relic Lycaena helle (Lycaenidae) went extinct in the Czech Republic, where a few lowland populations historically existed, in the 1950s. In 2002, a mountain-dwelling population was established in Šumava Mts., among grasslands and fenlands surrounding the abandoned village of Nové Údolí, from 2/33 ♂♂/♀♀ originating in the Türnitz Alps, Austria. The transferred population was surveyed a decade later and again 21 years after the transfer. During the second (2023) survey, we visited 212 grassland patches to record the species’ presence and relative abundance, and to ascertain its habitat preferences. A third of the surveyed patches were occupied by L. helle, in a total area of occupied grasslands was 66.6 ha scattered over 4.5 km2, with approximately 2,400 adult individuals, recorded up to 4.2 km from the original release point. L. helle typically occupies wet tussocky grasslands with closed edges, minimum management and high cover of its larval host plant, the mid-to late-successional forb Bistorta officinalis. It avoids drier managed grasslands rich in flowering plants. The expansion rate from the release point (0.1 km/year during the first decade, 0.2 km/year over two decades) was slower than in two earlier L. helle transfers, targeting Morvan and Forez Mts., France (≈ 0.5 km/year in both cases). We attribute this to the relief of the release locality, a­ shallow depression surrounded by higher-elevated forested ridges, but we expect faster expansion once the continuous woodlands are crossed.

Signatures of adaptation and purifying selection in highland populations of Dasiphora fruticosa.

High mountains harbor a considerable proportion of biodiversity, but we know little about how diverse plants adapt to the harsh environment. Here we finished a high-quality genome assembly for Dasiphora fruticosa, an ecologically important plant distributed in the Qinghai-Tibetan Plateau and lowland of the Northern Hemisphere, and resequenced 592 natural individuals to address how this horticulture plant adapts to highland. Demographic analysis revealed D. fruticosa underwent a bottleneck after Naynayxungla Glaciation. Selective sweep analysis of two pairs of lowland and highland population identified 63 shared genes related to cell wall organization or biogenesis, cellular component organization, and dwarfism, suggesting parallel adaptation to highland habitats. Most importantly, we found that stronger purging of estimated genetic load due to inbreeding in highland populations apparently contributed to their adaptation to the highest mountain. Our results revealed how plants could tolerate the extreme plateau, which could provide potential insights for species conservation and crop breeding.

Vaccinium dwarf shrubs responses to experimental warming and herbivory resistance treatment are species- and context dependent

Climate change impacts on species and ecosystem functioning may depend on climatic context and study systems. Climate warming and intensified herbivory are two stressors to plants that often appear in combination and are predicted to increase in cold environments. Effects of multiple drivers on plant performance are difficult to predict and warrant studies that use experimental manipulations along climatic gradients to produce more realistic knowledge. Our three study sites by the Sognefjord in Norway, that differed mainly in climatic conditions (ca. 5°C growing season difference), ranged from hemi-boreal lowland (100 masl, Low), via boreal mid-montane (500 masl) to alpine timberline (900 masl, High) bioclimates. At each site, in a randomized block design, we simulated growing-season warming using open-top chambers (OTCs) and experimentally induced herbivory resistance using the plant hormone methyl jasmonate (MeJA). We recorded growth, mortality, flower and fruit numbers, and insect herbivory on tagged ramets in permanent plots across three years (2016-2018) in three open woodland populations of two functionally important plant species with contrasting traits, Vaccinium myrtillus (bilberry) and V. vitis-idaea (lingonberry). Growth of both dwarf shrubs decreased with warming in the warm lowland populations (Low) but increased in the alpine populations (High). Shoot mortality increased most with warming at Low but was reduced at High. Reproduction, both flowering and fruiting, decreased with induced resistance treatment, but the effect was larger when warmed for bilberry and increased with elevation for both species. Leaf herbivory in bilberry increased with warming at Low but decreased at High. The combined warming and resistance treatment had only synergistic negative interaction effects on fruit numbers in bilberry. The clear context- and species-dependent effects of climate warming and increased resistance in this study may predict a potential decline in performance, as well as abundance and distribution, of these functionally important Vaccinium species at our lowest site. Bilberry reproduction appeared to be particularly susceptible to both climate warming and induced resistance in the manipulated populations. Such combined negative effects on plant performance are likely to have considerable knock-on effects via altered species’ interactions and ecosystem functioning.

Pollen thermotolerance of a widespread plant, Lotus corniculatus, in response to climate warming: possible local adaptation of populations from different elevations.

One of the most vulnerable phases in the plant life cycle is sexual reproduction, which depends on effective pollen transfer, but also on the thermotolerance of pollen grains. Pollen thermotolerance is temperature-dependent and may be reduced by increasing temperature associated with global warming. A growing body of research has focused on the effect of increased temperature on pollen thermotolerance in crops to understand the possible impact of temperature extremes on yield. Yet, little is known about the effects of temperature on pollen thermotolerance of wild plant species. To fill this gap, we selected Lotus corniculatus s.l. (Fabaceae), a species common to many European habitats and conducted laboratory experiments to test its pollen thermotolerance in response to artificial increase in temperature. To test for possible local adaptation of pollen thermal tolerance, we compared data from six lowland (389-451 m a.s.l.) and six highland (841-1,030 m a.s.l.) populations. We observed pollen germination in vitro at 15 °C, 25 °C, 30 °C, and 40 °C. While lowland plants maintained a stable germination percentage across a broad temperature range (15-30 °C) and exhibited reduced germination only at extremely high temperatures (40 °C), highland plants experienced reduced germination even at 30 °C-temperatures commonly exceeded in lowlands during warm summers. This suggests that lowland populations of L. corniculatus may be locally adapted to higher temperature for pollen germination. On the other hand, pollen tube length decreased with increasing temperature in a similar way in lowland and highland plants. The overall average pollen germination percentage significantly differed between lowland and highland populations, with highland populations displaying higher germination percentage. On the other hand, the average pollen tube length was slightly smaller in highland populations. In conclusion, we found that pollen thermotolerance of L. corniculatus is reduced at high temperature and that the germination of pollen from plant populations growing at higher elevations is more sensitive to increased temperature, which suggests possible local adaptation of pollen thermotolerance.

Mechanisms underpinning sympathoexcitation in hypoxia.

Sympathoexcitation is a hallmark of hypoxic exposure, occurring acutely, as well as persisting in acclimatised lowland populations and with generational exposure in highland native populations of the Andean and Tibetan plateaus. The mechanisms mediating altitude sympathoexcitation are multifactorial, involving alterations in both peripheral autonomic reflexes and central neural pathways, and are dependent on the duration of exposure. Initially, hypoxia-induced sympathoexcitation appears to be an adaptive response, primarily mediated by regulatory reflex mechanisms concerned with preserving systemic and cerebral tissue O2 delivery and maintaining arterial blood pressure. However, as exposure continues, sympathoexcitation is further augmented above that observed with acute exposure, despite acclimatisation processes that restore arterial oxygen content ( ). Under these conditions, sympathoexcitation may become maladaptive, giving rise to reduced vascular reactivity and mildly elevated blood pressure. Importantly, current evidence indicates the peripheral chemoreflex does not play a significant role in the augmentation of sympathoexcitation during altitude acclimatisation, although methodological limitations may underestimate its true contribution. Instead, processes that provide no obvious survival benefit in hypoxia appear to contribute, including elevated pulmonary arterial pressure. Nocturnal periodic breathing is also a potential mechanism contributing to altitude sympathoexcitation, although experimental studies are required. Despite recent advancements within the field, several areas remain unexplored, including the mechanisms responsible for the apparent normalisation of muscle sympathetic nerve activity during intermediate hypoxic exposures, the mechanisms accounting for persistent sympathoexcitation following descent from altitude and consideration of whether there are sex-based differences in sympathetic regulation at altitude.

The contribution of carbon budget to masting intervals in Veratrum album populations inhabiting different elevations.

Mast flowering/seeding is often more extreme in lower-resource environments, such as alpine compared to lowland habitats. We studied a masting herb that had less extreme masting at higher elevations, and tested if this difference could be explained by higher photosynthetic productivity and/or lower reproductive investment at the higher-elevation sites. We examined the relationship between flowering intervals and carbon budget (i.e., the balance between reproductive investment and annual carbon fixation) in a masting herb, Veratrum album subsp. oxysepalum, across five lowland and six alpine populations in northern Japan. We evaluated the previous flowering histories of individual plants based on rhizome morphology and analyzed the masting patterns of individual populations. Total mass of the reproductive organs, as a proxy of reproductive investment, was compared between the lowland and alpine populations. Annual carbon fixation was estimated on the basis of photosynthetic capacity, total leaf area per plant, and seasonal transition of light availability. Interval between high-flowering years was shorter and total reproductive investment was smaller in the alpine than in the lowland populations. Owing to its high photosynthetic capacity and continuous bright conditions, annual carbon fixation per plant was 1.5 times greater in alpine habitat than in lowland habitat. These results suggest that V. album alpine populations have shorter flowering intervals than lowland populations due to faster recovery from energy loss after reproduction. Our study demonstrated that masting intervals in V. album populations can be explained by habitat-specific carbon budget balances.

The phylogeographic journey of a plant species from lowland to highlands during the Pleistocene

Phylogeographic history refers to how species evolve and diversify in response to historical, ecological, and demographic factors. The climate fluctuation during the Pleistocene period marked a crucial time in shaping many species’ distribution and genetic structure, particularly those from southern South American grasslands. This work investigated the phylogeographic history of a highland grassland, Petunia altiplana T. Ando & Hashim. (Solanaceae), its diversity, and geographic distribution using a population genomic approach based on RAD-seq data. Our results indicated that, during the Pleistocene, when the grasslands expanded to highlands, the lowland populations of P. altiplana reached the higher open fields, enlarging their geographic distribution. We found that the P. altiplana genetic diversity followed the geographic division into eastern (E) and western (WE) population groups, with a subtle division in the E group regarding the Pelotas River headwater. The results also showed that isolation by distance was the main divergence pattern, with elevation playing a pivotal role in shaping WE and E groups. Our findings indicated that lowland-adapted populations quickly colonized highlands during the late Pleistocene.

Effect of Environmental Temperature in Lowlands on Lung Health: A Literature Review

Lowlands, with their hot and humid climates, present health challenges especially on the respiratory system. High ambient temperatures can worsen lung conditions, especially for people with asthma or chronic obstructive pulmonary disease (COPD). In the context of climate change and increased air pollution, it is important to understand the impact of environmental temperature on lung health in lowlands. The study aimed to review the existing literature to evaluate these effects, focusing on the mechanisms underlying this relationship and the long-term effects of high temperature exposure on lung function. The method used was a systematic literature review, which included relevant studies from scientific journals on the relationship between environmental temperature and lung health, as well as epidemiological studies in lowland populations. The article search technique in this study is through web access to Mendeley, and Science Direct. The results showed that high temperatures could trigger exacerbations of lung diseases, increase pollutant particles, and decrease lung function, as well as increase the risk of respiratory infections and decrease quality of life. In conclusion, high temperatures in lowlands have a significant impact on lung health, requiring mitigation efforts, and further research to understand the underlying biological mechanisms and develop effective intervention strategies.

Highland and lowland forest birds differ in their feather growth rates: a multispecies test in the southwestern Palaearctic

Mountain birds face numerous challenges caused by altitude‐dependent environmental seasonality. Although elevation gradients may affect bird morphology, migration strategy and/or phenology of seasonal events (breeding and moulting), the life histories of highland compared with lowland birds have been little explored. In this study we compared the growth rate and mass of the tail feathers of six forest passerine species sampled at different elevations in the Iberian Peninsula (north) and the Maghreb (south) to assess potential differences in moult duration and feather quality between highland and lowland bird populations. As timing is crucial in seasonal environments, we also explored seasonal changes in temperature in the different study areas as a proxy for the duration of the optimal temporal windows available in summer for breeding and moulting. In addition, we compared wing configuration between highland and lowland populations, which could reflect differences in their migration strategy (migratory versus sedentary). The results showed that highland birds had less time available for breeding and moulting, longer and more concave wings, and faster feather growth rates than lowland populations, but we found no consistent patterns of variation in feather mass. These results suggest that selection might have favoured an accelerated moult and a more migratory behaviour in highland populations to cope with the reduction in the optimal temporal window as elevation increases. These patterns are similar to those observed in migratory populations moving along latitudinal gradients to breed in highly seasonal northern environments. We therefore hypothesize that elevational gradients at the southern limit of the Palaearctic could be an important driving force promoting variation in feather growth rate and wing configuration, and probably also other avian life‐history characteristics.

Whole mitochondrial genome analysis in highland Tibetans: further matrilineal genetic structure exploration.

Introduction: The Qinghai-Tibet Plateau is one of the last terrestrial environments conquered by modern humans. Tibetans are among the few high-altitude settlers in the world, and understanding the genetic profile of Tibetans plays a pivotal role in studies of anthropology, genetics, and archaeology. Methods: In this study, we investigated the maternal genetic landscape of Tibetans based on the whole mitochondrial genome collected from 145 unrelated native Lhasa Tibetans. Molecular diversity indices, haplotype diversity (HD), Tajima's D and Fu's Fs were calculated and the Bayesian Skyline Plot was obtained to determining the genetic profile and population fluctuation of Lhasa Tibetans. To further explore the genetic structure of Lhasa Tibetans, we collected 107 East Asian reference populations to perform principal component analysis (PCA), multidimensional scaling (MDS), calculated Fst values and constructed phylogenetic tree. Results: The maternal genetic landscape of Tibetans showed obvious East Asian characteristics, M9a (28.28%), R (11.03%), F1 (12.41%), D4 (9.66%), N (6.21%), and M62 (4.14%) were the dominant haplogroups. The results of PCA, MDS, Fst and phylogenetic tree were consistent: Lhasa Tibetans clustered with other highland Tibeto-Burman speakers, there was obvious genetic homogeneity of Tibetans in Xizang, and genetic similarity between Tibetans and northern Han people and geographically adjacent populations was found. In addition, specific maternal lineages of Tibetans also be determined in this study. Discussion: In general, this study further shed light on long-time matrilineal continuity on the Tibetan Plateau and the genetic connection between Tibetans and millet famers in the Yellow River Basin, and further revealed that multiple waves of population interaction and admixture during different historical periods between lowland and highland populations shaped the maternal genetic profile of Tibetans.

THE CATALYTIC PROPERTIES OF LACTATE DEHYDROGENASE IN SKELETAL MUSCLES AND LIVER OF THE MARSH FROG (PELOPHYLAX RIDIBUNDUS) DEPEND ON ITS ECOLOGICAL AND GEOGRAPHICAL LOCATION

The marsh frog (Pelophylax ridibundus) has a widespread distribution range, which is due to a variety of adaptations that contribute to the development of tolerance to a wide range of physicochemical environmental factors. Of particular interest are the adaptations of these animals to different levels of oxygen in mid- and high-altitude conditions. In this work, a comparative analysis of the kinetic parameters of lactate dehydrogenase (LDH) in the liver of marsh frogs living in the mountainous and lowland regions of Dagestan was carried out. Animals caught in their habitats were decapitated, the liver and calf muscles were isolated, and they were placed in liquid nitrogen. In the laboratory, the selected tissues were homogenized and mitochondria-free cytosol was obtained by differential centrifugation, in which LDH activity was determined. It was found that LDH activity is significantly higher in the tissues of frogs from mountainous regions: by 42.4% in the muscles and 2.38 times in the liver (p 0.05). The high efficiency of catalysis is ensured due to significant changes in the catalytic parameters of the enzyme: an increase in Vmax (50.9% in muscles and 70% in the liver (p 0.05)) and a decrease in Km. (45.9% in muscles and 69% in liver, (p 0.05)). A more pronounced difference, compared to muscles, between LDH activity in the liver of foothill and lowland populations of frogs suggests that the sensitivity of liver LDH to changes in oxygen tension is higher. The vector of a number of other kinetic parameters of LDH (Ki, Sopt, Δ) in the liver of animals from mountainous landscapes is absolutely opposite to that of skeletal muscles. High activity and modifications of the catalytic properties of LDH in the tissues of marsh frogs living in mid-mountain areas may play an important role in the adaptation of these animals to conditions of oxygen deficiency.

The development of early farming diets and population change in the Maya region and their climate context

We explore the impact of a millennium-long period of decreased rainfall during the transition from the Middle to Late Holocene on human diet and population dynamics in the northern neotropical Maya Lowlands. To do so, we use a nearby paleo-precipitation reconstruction to evaluate the timing of this period of reduced rainfall and compare those data to population proxies and stable isotopes of carbon and nitrogen from directly dated human bone spanning the interval of interest. Our results show that decreased precipitation coincided with archaeological and isotopic evidence for increasing reliance on maize as a dietary staple. Two rockshelter sites located in Southern Belize have produced a mortuary assemblage that spans the Holocene. These assemblages provide a unique opportunity to examine how early farmers during the transition to agriculture may have been affected by Middle to Late Holocene climate change. Between 5600 and 4200 cal BP lowland populations were already consuming significant amounts of maize reflected in proxies for the protein and the whole diet portions, suggesting the establishment of farming communities at least 800–2200 years before the emergence of public architecture. We demonstrate that increasing reliance on maize shows the resilience of farming populations to climate variability during this crucial period just prior to massive demographic change and the emergence of complex economic institutions.

Coping with extremes: Alternations in diet, gut microbiota, and hepatic metabolic functions in a highland passerine

In wild animals, diet and gut microbiota interactions are critical moderators of metabolic functions and are highly contingent on habitat conditions. Challenged by the extreme conditions of high-altitude environments, the strategies implemented by highland animals to adjust their diet and gut microbial composition and modulate their metabolic substrates remain largely unexplored. By employing a typical human commensal species, the Eurasian tree sparrow (Passer montanus, ETS), as a model species, we studied the differences in diet, digestive tract morphology and enzyme activity, gut microbiota, and metabolic energy profiling between highland (the Qinghai-Tibet Plateau, QTP; 3230 m) and lowland (Shijiazhuang, Hebei; 80 m) populations. Our results showed that highland ETSs had enlarged digestive organs and longer small intestinal villi, while no differences in key digestive enzyme activities were observed between the two populations. The 18S rRNA sequencing results revealed that the dietary composition of highland ETSs were more animal-based and less plant-based than those of the lowland ones. Furthermore, 16S rRNA sequencing results suggested that the intestinal microbial communities were structurally segregated between populations. PICRUSt metagenome predictions further indicated that the expression patterns of microbial genes involved in material and energy metabolism, immune system and infection, and xenobiotic biodegradation were strikingly different between the two populations. Analysis of liver metabolomics revealed significant metabolic differences between highland and lowland ETSs in terms of substrate utilization, as well as distinct sex-specific alterations in glycerophospholipids. Furthermore, the interplay between diet, liver metabolism, and gut microbiota suggests a dietary shift resulting in corresponding changes in gut microbiota and metabolic functions. Our findings indicate that highland ETSs have evolved to optimize digestion and absorption, rely on more protein-rich foods, and possess gut microbiota tailored to their dietary composition, likely adaptive physiological and ecological strategies adopted to cope with extreme highland environments.

Inter-annual variation in adult demography, but no sex bias in a large lowland population of the threatened Clouded Apollo Parnassius mnemosyne butterfly

The Clouded Apollo, Parnassius mnemosyne is a charismatic West Palaearctic butterfly, threatened in some European countries and listed in Appendix IV of the Habitats’ Directive. We investigated a large lowland population of the species inhabiting a complex of irregularly coppiced light forest and adjacent wet meadows in the anthropogenic landscape in the valley of the Narew river in NE Poland. A mark-release-recapture (MRR) method was used over 4 years to estimate population size, adult catchability, daily survival and lifespan. The beginning and length of the flight period (which lasted 4–6 weeks) differed over the years and was clearly related to weather conditions (temperature, sunshine) in April, i.e. the most important period for larval development. The seasonal population size varied from 555 to 942 adults. In contrast to some previous studies, the sex ratio turned out to be well balanced, although the catchability of males was significantly higher than that of females in each year. The quality of the wings deteriorated during the season in both sexes, but it was generally better in the case of females, which indicates that they are less active. Inter-seasonal variation in the lifespan (6.36–12.45 days) is more difficult to interpret, but it is worth noting that individuals lived the longest in the coldest and least sunlit flight period. The temporal fragmentation index (i.e. the ratio of flight-period length to adult lifespan) also varied (3.37–5.97) but was generally relatively low, which suggests that there is no threat of reduction of the effective population size at the moment. Nevertheless, the investigated population may be at risk of decline due to the observed intensification of meadow use and especially the possible conversion of grasslands into cornfields.

Deciphering phylogenetic relationships and genetic diversity of Moroccan saffron (Crocus sativus L.) using SSRg markers and chloroplast DNA SNP markers

The molecular characterization of C. sativus accessions is of great interest for clonal selection and preservation of valuable resources with the best productive traits and specific patterns related to local products. To analyze the genetic diversity of Moroccan saffron, fourteen new saffron accessions were evaluated, twelve of which were from Morocco and two from Kozani in Greece, and the Quercy region of France. These accessions differ by their geographical distribution and altitudes. Seven specific C. sativus Simple-sequence repeats (SSRs) primers were considered. Their combinations generated 13 monomorphic alleles across all studied accessions with an average of 1.85 allele/locus. Additionally, fourteen unique ABRII/Cs30 SSR locus sequences were obtained and registered in the NCBI database (MZ868510-MZ868523). Single nucleotide polymorphism (SNP) was also assessed considering the ABRII/Cs30 locus. By excluding gaps and missing data from the sequence alignment, 161 sites were produced. The DnaSP analysis of all accessions revealed 40 polymorphic sites, including thirty-two among the Moroccan accessions. Nucleotide diversity (PiT) was 0.03896, while the average nucleotide difference was 6.27273. The haplotype diversity (HD) of Moroccan and all accessions was 0.848 and 0.875, respectively, demonstrating a strong capacity of the ABRII/Cs30 locus to distinguish saffron accessions. The Tazenakht (TK) population was the most polymorphic, while the Low land (TB) population was monomorphic. Sequence-based genetic relationships imply that Moroccan saffron likely originated from Greece. Our results show that the SNPs approach is a powerful tool to evaluate genetic diversity among C. sativus accessions. The present molecular analysis indicates that Moroccan saffron is not a single clone. This outcome constitutes a sound basis for developing a core collection representative of the biodiversity of Moroccan saffron to conserve and enhance this critical commodity.

The Genomic Basis of Adaptation to High Elevations in Africanized Honey Bees.

A range of different genetic architectures underpin local adaptation in nature. Honey bees (Apis mellifera) in the Eastern African Mountains harbor high frequencies of two chromosomal inversions that likely govern adaptation to this high-elevation habitat. In the Americas, honey bees are hybrids of European and African ancestries and adaptation to latitudinal variation in climate correlates with the proportion of these ancestries across the genome. It is unknown which, if either, of these forms of genetic variation governs adaptation in honey bees living at high elevations in the Americas. Here, we performed whole-genome sequencing of 29 honey bees from both high- and low-elevation populations in Colombia. Analysis of genetic ancestry indicated that both populations were predominantly of African ancestry, but the East African inversions were not detected. However, individuals in the higher elevation population had significantly higher proportions of European ancestry, likely reflecting local adaptation. Several genomic regions exhibited particularly high differentiation between highland and lowland bees, containing candidate loci for local adaptation. Genes that were highly differentiated between highland and lowland populations were enriched for functions related to reproduction and sperm competition. Furthermore, variation in levels of European ancestry across the genome was correlated between populations of honey bees in the highland population and populations at higher latitudes in South America. The results are consistent with the hypothesis that adaptation to both latitude and elevation in these hybrid honey bees are mediated by variation in ancestry at many loci across the genome.