Doping of perovskites with the heteroatoms has emerged as an additional lever, a dimension beyond structural perfection and compositional distinction, for the alteration of many properties of perovskites. In this work, a series of different metals were doped via citric acid sol–gel method to investigate their influences on the structure and catalytic performance of La-Mn perovskite oxides for NH3-SCR reaction. It is found that Zr doped La-Mn oxides (LMZr) displays better low-temperature deNOx performance (T90 = 118 °C) than other metal doped catalysts. Such a result is mainly attributed to the increase of Lewis acid sites, surface Mn4+ and adsorbed oxygen species. Besides, La-Mn perovskite doped with Sr, Ce, Y and Al can also obviously improve low-temperature deNOx activity and N2 selectivity. These doped metals mainly change the electron transfer between different cations, thus changing the valence distribution of Mn on the surface, meanwhile, metal doping changes the crystalline size of the catalysts, thereby affecting the adsorption and activation of NH3 and O2 involved in the removal of NO. Although other metal doping alters the tolerance of the La-Mn catalyst to SO2 and/or H2O, SO2 is inevitably oxidized to S6+ and deposits on the catalyst surface. Zr or Ce doping significantly enhances the tolerance to SO2 and/or H2O, but they have a different mechanism. Zr reduces the deposition rate of sulfate while Ce reacts with SO2 to form Ce2(SOx)3 to protect Mn active species. This paper highlights the importance of Lewis acid, Mn4+ content and adsorbed oxygen in the NH3-SCR reaction.