Floating treatment wetlands (FTWs) use plants’ roots for water quality improvement. The plants are supported by a buoyant structure deployed at the water surface. The roots form a porous zone beneath the structure and remove pollutants carried in suspension through filtering, absorption and uptake. This paper used CFD simulation to model FTWs arranged in series and spanning the channel width and to study the effects of root length and spacing between FTWs on flow distribution and mass removal. The root zone was modelled as a porous media, and removal was computed using first-order decay, for which a range of removal constants was tested. Longer roots increased the reactive volume of the root zone, which increased the fraction of pollutant inflow entering the FTWs. Increasing the distance between FTWs allowed greater mixing between water that went through and beneath the upstream FTW. This increased the concentration entering each FTW, which enhanced mass removal per FTW. However, a larger distance between FTWs reduced the number of FTWs in the channel, reducing the reactive volume. In the tradeoff between mixing and reactive volume, the reactive volume was more important, such that total removal in the channel increased with longer roots and more units of FTW (shorter gap distance). However, removing the gap entirely was detrimental, as FTWs in series removed more mass than a continuous FTW of same volume. This study points to two design recommendations for FTWs in series. First, if resources for building FTWs are not limiting, but the channel length is, it is preferable to prioritize higher reactive volume (shorter gap distance) to achieve maximum removal per channel length. Second, if resources for FTWs are limiting, but channel length is not, it is better to place the FTWs with a longer gap distance, preferably along enough to allow mixing over the full depth between FTWs, as this will achieve maximum removal per FTW.