This work investigates the potentiality of the 2D electrical resistivity tomography method to delineate an altered intrusive rock domain. The detection and characterization of such altered domains are crucial to understanding local hydrogeological conditions. Here, the target is the San Luis area, located in the northern part of the Estibaná River watershed, within the Los Santos Province in the central region of the Isthmus of Panama. First, a detailed geological survey was carried out to better constrain the tectonic structures. Then, two geological sections were developed based on two 2D electrical resistivity tomographies. A geoelectrical simulation process was conducted in both sections to set theoretical models whose model responses (synthetic field data set) would be consistent with the observations. After appropriate selection of the inversion parameters by using the Boundless Electrical Resistivity Tomography (BERT) code, the observations were processed, resulting in low calculation errors (2 < 0.51). Based on the superficial geological information and the results of the geophysical modelling, two profiles were established, depicting the lateral and in-depth distribution of rocks and sediments. The limit of the Ocú-Parita fault zone was identified as well. The results of the 2D inversion of the synthetic data, obtained with the established theoretical models, are consistent with the 2D inversion of the observations. Electrical resistivity tomography studies can be useful in establishing groundwater management models, particularly in areas that experience severe water scarcity during the dry season.