Inferior electrical conductivity, huge volume swell, shuttle effect and slow redox reactions in Li-S batteries restrict their practical applications. In this study, molybdenum disulfide nanosheets anchored on nitrogen-doped carbon nanotubes encapsulating molybdenum disulfide nanoparticles (MoS2/NC/MoS2 NTs) were prepared by heat treatment, ammonia etching, high-temperature sulfurization, and solvent-thermal in-situ growth using polypyrrole-coated molybdenum trioxide nanorods (MoO3 NRs) as templates. The hollow structure of nitrogen-doped carbon nanotubes and the high specific surface area are conducive to increasing sulfur loading, increasing the contact area of electrolyte, accelerating the electron transport, and shortening the lithium ion transport route. The MoS2 nanosheets on the outer layer of the nitrogen-doped carbon tubes and the MoS2 particles wrapped inside can anchor polysulfides by chemisorption, slowing down the shuttle effect and enhancing the energy storage performance of lithium-sulfur batteries. The MoS2/NC/MoS2/S nanotubes (MoS2/NC/MoS2/S NTs) maintain a capacity of 498.9 mAh g−1 over 500 cycles at 1.0 A g−1, with an average single-cycle capacity decay rate of 0.061 %. The density functional theory calculations, the adsorption experiments, and the X-ray photoelectron spectroscopy results all confirm that the MoS2/NC/MoS2 NTs are able to anchor lithium polysulfides through strong adsorption, thus effectively mitigating the shuttle effect of polysulfides. The synthesis of MoS2/NC/MoS2/S NTs in this study is of important significance for the development of advanced lithium-sulfur batteries.