Autonomous vehicles are to revolutionize the way urban mobility demands are served, and they are most likely to be powered by electricity. To accurately quantify the benefits of replacing existing mobility services with autonomous electric vehicles, electric autonomous mobility-on-demand (EAMoD) systems need to be evaluated and designed with the congestion effects they may cause taken into account. In this work, the congestion effects are depicted through a discrete event simulation model with state-dependent link travel speed and limited link space that allow endogenous congestion to emerge, spread, and dissipate across the entire road network. Three mathematical models are integrated into the simulation model to optimally match vehicles with waiting requests, relocate empty vehicles to potential high-demand areas, and assign low charge vehicles to charging stations based on the workloads of the charging stations. Based on the simulation model, we apply Bayesian optimization to jointly design the fleet size and charging facility configuration considering the endogenous congestion incurred by the daily operation of autonomous electric vehicles. Contraction hierarchies are adopted to route vehicles to perform assigned tasks in real-time. The proposed solution method is tested on Manhattan below 60th street, which corresponds to the potential congestion pricing zone in New York City. Experiment results show that the proposed simulation-based optimization approach is computationally tractable, and can find a satisfactory solution to the fleet sizing and charging infrastructure design problem within a tight computation budget. Excluding congestion effects at system design stage would lead to up to 14% passenger loss due to long assignment waiting time. Although the charging facility cost accounts for only 1.8% of the total cost, the number of chargers can indirectly affect the percentage of passengers that can be served through its efficiency in recharging vehicles. A charging facility configuration aligned with the fleet size can help to improve service quality and vehicle utilization rate.
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