Light-induced Isomerization Research Articles

Light-induced reversible switching of generation and extinction of an organic radical anion.

Radicals play a crucial role across various domains, ranging from serving as catalysts in chemical reactions to materials for spintronic applications. Currently, a major challenge for the chemists is the development of the next generation of organic radicals controllable by photons. To tackle this challenge, here we introduce a dyad system that combines a dimethyldihydropyrene (DHP) photochromic unit with a naphthalene diimide (NDI) moiety. This system forms a stable organic NDI-based radical-anion upon exposure to light in a solvent containing a small amount of an amine that acts as an electron donor. The radical anion formation has also been demonstrated with a chemical reductant. The photoisomerization of this photochromic system converts it into a less-conjugated and less-electron-rich form, affecting the generation of the radical as well as its stability. Consequently, light-induced isomerization effectively quenches the radical. Thus, the formation and existence of the radical can be adjusted by manipulating the photoisomerization of the photochromic unit under diverse light sources. Additionally, the system exhibits significant differences in emission in the radical and the closed-shell state, thereby offering a dual readout of the state of the molecule.

Grafting photochromic spiropyran polymer brushes on natural rubber surface via surface-initiated ring-opening metathesis polymerization

The modification of stereoregulated functionalized polymers on the surface of natural rubber (NR) is a challenging task. This work provided a practicable grafting method to design photochromic polymer brushes on the NR surfaces using surface-initiated ring-opening metathesis polymerization (SI-ROMP). The designed photochromic polymer brushes were based on norbornenes with spiropyrin (SP) pendents, and grew from the surface of NR films in the presence of Grubbs 2nd catalyst. The results showed that the grafting rate of polymer brushes with photoisomerization structure reached up to 44.91 %. The modified natural rubber (NR-SP) films exhibited rapid coloring/decolorization property under UV irradiation and visible light. This photochromic property initiated by the light-induced isomerisation of the spiropyran structure and the increased surface energy under light stimuli. NR-SP films exhibited stable photochromic characteristics and outstanding anti-fatigue properties after exposing to over six cycles of consecutive UV/Vis irradiation. A simple and practical strategy for the preparation of highly sensitive photochromic natural rubber materials is proposed and provides a potential application in the fields of information storage and anti-counterfeiting.

Influence of pump laser fluence on ultrafast myoglobin structural dynamics.

High-intensity femtosecond pulses from an X-ray free-electron laser enable pump-probe experiments for the investigation of electronic and nuclear changes during light-induced reactions. On timescales ranging from femtoseconds to milliseconds and for a variety of biological systems, time-resolved serial femtosecond crystallography (TR-SFX) has provided detailed structural data for light-induced isomerization, breakage or formation of chemical bonds and electron transfer1,2. However, all ultrafast TR-SFX studies to date have employed such high pump laser energies that nominally several photons were absorbed per chromophore3-17. As multiphoton absorption may force the protein response into non-physiological pathways, it is of great concern18,19 whether this experimental approach20 allows valid conclusions to be drawn vis-à-vis biologically relevant single-photon-induced reactions18,19. Here we describe ultrafast pump-probe SFX experiments on the photodissociation of carboxymyoglobin, showing that different pump laser fluences yield markedly different results. In particular, the dynamics of structural changes and observed indicators of the mechanistically important coherent oscillations of the Fe-CO bond distance (predicted by recent quantum wavepacket dynamics21) are seen to depend strongly on pump laser energy, in line with quantum chemical analysis. Our results confirm both the feasibility and necessity of performing ultrafast TR-SFX pump-probe experiments in the linear photoexcitation regime. We consider this to be a starting point for reassessing both the design and theinterpretation of ultrafast TR-SFX pump-probe experiments20 such that mechanistically relevant insight emerges.

Light-induced isomerization of quinoline-N-oxide derivatives through Zn-catalysis: a photochemical approach for synthesizing 2-quinolinone derivatives

The light-induced Zn-catalyzed isomerization of quinoline-N-oxides proceeded smoothly to afford 2-quinolinone derivatives via intramolecular hydrogen and oxygen transfer.

A Photoswitchable Macrocycle Controls Anion-Templated Pseudorotaxane Formation and Axle Relocalization.

Important biological processes, such as signaling and transport, are regulated by dynamic binding events. The development of artificial supramolecular systems in which binding between different components is controlled could help emulate such processes. Herein, we describe stiff-stilbene-containing macrocycles that can be switched between (Z)- and (E)-isomers by light, as demonstrated by UV/Vis and 1 H NMR spectroscopy. The (Z)-isomers can be effectively threaded by pyridinium halide axles to give pseudorotaxane complexes, as confirmed by 1 H NMR titration studies and single-crystal X-ray crystallography. The overall stability of these complexes can be tuned by varying the templating counteranion. However, upon light-induced isomerization to the (E)-isomer, the threading capability is drastically reduced. The axle component, in addition, can form a heterodimeric complex with a secondary isophthalamide host. Therefore, when all components are combined, light irradiation triggers axle exchange between the macrocycle and this secondary host, which has been monitored by 1 H NMR spectroscopy and simulated computationally.

Photochromic Nucleosides and Oligonucleotides.

Photochromism is a reversible phenomenon wherein a material undergoes a change in color upon exposure to light. In organic photochromes, this effect often results from light-induced isomerization reactions, leading to alterations in either the spatial orientation or electronic properties of the photochrome. The incorporation of photochromic moieties into biomolecules, such as proteins or nucleic acids, has become a prevalent approach to render these biomolecules responsive to light stimuli. Utilizing light as a trigger for the manipulation of biomolecular structure and function offers numerous advantages compared to other stimuli, such as chemical or electrical treatments, due to its non-invasive nature. Consequently, light proves particularly advantageous in cellular and tissue applications. In this review, we emphasize recent advancements in the field of photochromic nucleosides and oligonucleotides. We provide an overview of the design principles of different classes of photochromes, synthetic strategies, critical analytical challenges, as well as structure-property relationships. The applications of photochromic nucleic acid derivatives encompass diverse domains, ranging from the precise photoregulation of gene expression to the controlled modulation of the three-dimensional structures of oligonucleotides and the development of DNA-based fluorescence modulators. Moreover, we present a future perspective on potential modifications and applications.

Generation of Orbital Angular Momentum Light by Patterning Azopolymer Thin Films

Orbital angular momentum (OAM) encoding is a promising technique to boost data transmission capacity in optical communications. Most recently, azobenzene films have gained attention as a versatile tool for creating and altering OAM-carrying beams. Unique features of azobenzene films make it possible to control molecular alignment through light-induced isomerization about the azo bond. This feature enables the fabrication of diffractive optical devices such as spiral phase plates and holograms by accurately imprinting a phase profile on the incident light. By forming azobenzene sheets into diffractive optical elements, such as spiral phase plates, one can selectively create OAM-carrying beams. Due to the helical wavefront and phase variation shown by these beams, multiple distinct channels can be encoded within a single optical beam. This can significantly increase the data transmission capacity of optical communication systems with this OAM multiplexing technique. Additionally, holographic optical components made from azobenzene films can be used to build and reconstruct intricate wavefronts. It is possible to create OAM-based holograms by imprinting holographic designs on azobenzene films, which makes it simpler to control and shape optical beams for specific communication requirements. In addition, azobenzene-based materials can then be suitable for integration into optical communication devices because of their reconfigurability, compactness, and infrastructure compatibility, which are the main future perspectives for achieving OAM-based technologies for the next generation, among other factors. In this paper, we see the possible use of azobenzene films in the generation and modification of OAM beams for optical communications through light-induced isomerization. In addition, the potential role of azobenzene films in the development of novel OAM-based devices that paves the way for the realization of high-capacity, OAM-enabled optical communication networks are discussed.

Photoprotective Steering of Previtamin D3 Photochemistry by Phenylalanine in Solution

Provitamin D3 is the biological precursor to naturally formed vitamin D3 in humans, and its conversion is initiated via photoexcitation by near ultraviolet light. Following an initial photolysis, the primary intermediate, known as previtamin D3, is prone to light-induced isomerization or recyclization, which creates byproducts that limit the desired final thermal conversion to vitamin D3. The branching of the photochemical reaction is highly wavelength-dependent, whereby excitation toward the blue edge of the provitamin D3 absorption spectrum tends to terminate the reaction with the most undesired tachysterol byproduct and the lowest previtamin D3 concentration. In this work, the influence of introducing the natural amino acid phenyalanine as an excitation energy donor to the photochemical reaction is investigated. We find that the incorporation of phenylalanine into provitamin D3 solution results in greater intermediate concentrations and prolonged lifetimes of the desired previtamin D3 while simultaneously reducing the final concentration of tachysterol when exposing the solution to wavelengths at the blue edge of the provitamin D3 spectrum. The results, coupled with quantum chemical analysis, suggest that phenylalanine indeed helps to funnel energy from shorter wavelengths more effectively into the provitamin D3 precursor, while simultaneously screening those wavelengths from direct excitation, which otherwise leads to enhanced concentrations of tachysterol byproduct at the expense of previtamin D3.

Characteristics of LED light-induced geometrical isomerization and degradation of astaxanthin and improvement of the color value and crystallinity of astaxanthin utilizing the photoisomerization

The effects of light-emitting diode (LED) irradiation characterized by different emission wavelengths on the E/Z-isomerization and degradation of astaxanthin were investigated. LED irradiation slightly promoted Z-isomerization of astaxanthin, whereas the all-E-isomerization was highly efficiently promoted at specific wavelengths, especially at 365 nm. Astaxanthin isomers did not degrade significantly when dissolved in ethanol and subjected to LED irradiation conditions for 300 min. However, significant degradation was achieved when ethyl acetate was used for dissolution, and the samples were irradiated at the wavelength of 405 nm. The addition of α-tocopherol suppressed the photodegradation of astaxanthin. LED irradiation significantly affected the physical properties of astaxanthin Z-isomers. Irradiation with 365, 405, and 470 nm LEDs enhanced the color value (redness) and crystallinity of the Z-isomers via an all-E-isomerization reaction. These findings can contribute to the development of technologies that can arbitrarily control the E/Z-isomer ratio and physical properties of astaxanthin.

The Switching Mechanisms of Dihydroazulene/ Vinylheptafulvene Photo-/Thermoswitches

We have investigated the switching mechanisms of photochromic systems that are relevant for harvesting, storing, and releasing solar energy. We consider storage of solar energy in the form of energetic chemical bonds via light-induced isomerization reactions. The approach concerns photoswitches that upon irradiation isomerize to high-energy metastable isomers and through the corresponding backreaction will release the stored energy. Thereby, we have considered molecular closed-cycle energy storage systems that do not involve the release of CO2 . We present potential energy surfaces for ground states and excited states and discuss the roles that these states play when harvesting, storing, and releasing solar energy. Furthermore, we have illustrated new approaches for obtaining synergy between theoretical modeling and future experimental work.

Monodirectional Photocycle Drives Proton Translocation.

Photoisomerization of retinal is pivotal to ion translocation across the bacterial membrane and has served as an inspiration for the development of artificial molecular switches and machines. Light-driven synthetic systems in which a macrocyclic component transits along a nonsymmetric axle in a specific direction have been reported; however, unidirectional and repetitive translocation of protons has not been achieved. Herein, we describe a unique protonation-controlled isomerization behavior for hemi-indigo dyes bearing N-heterocycles, featuring intramolecular hydrogen bonds. Light-induced isomerization from the Z to E isomer is unlocked when protonated, while reverse E → Z photoisomerization occurs in the neutral state. As a consequence, associated protons are displaced in a preferred direction with respect to the photoswitchable scaffold. These results will prove to be critical in developing artificial systems in which concentration gradients can be effectively generated using (solar) light energy.

A bisphotochromic system featuring two modes of photoisomerization controlled by solvent polarity

Combining two or more photoswitchable units in one molecule results in multiphotochromic hybrids with attractive sophisticated performance. On-demand switching of light-induced isomerization pathways for such systems by change of solvent polarity is a virtually unexplored phenomenon. Using NMR spectroscopy, we have demonstrated that the competition between 6π-electrocyclization and E-/Z-isomerization of 2,3-bis(2,5-dimethylthiophen-3-yl)-5-(4-dialkylaminobenzylidene)cyclopent-2-en-1-ones depends on the solvent's nature. Cyclization of diarylethene predominates in less polar solvents, whereas isomerization of the arylidene moiety prevails in polar media. This result could be the starting point for the development of multiphotochromic hybrids with efficient solvent-controllable selectivity of photoreactions.

Selective control of donor-acceptor Stenhouse adduct populations with non-selective stimuli

Selective control of donor-acceptor Stenhouse adduct populations with non-selective stimuli

Oblique helicoidal state of the twist-bend nematic doped by chiral azo-compound

ABSTRACT A novel light-sensitive chiral dopant ChD-3816 (an azo-compound containing 4-hexanoyloxyphenyl and 2-isopropyl-5-methylcyclohexylbenzoate moieties) was used for inducing helical twisting in Ntb-forming mixtures of CB7CB/CB6OCB with 5CB added to decrease the phase transition temperatures. The effects of ChD-3816 upon phase transition temperatures, as well as effects of its concentration on the measured values of helical twisting, were determined. Most of the measured parameters could be varied due to light-induced trans-cis isomerisation of ChD-3816. Under electric field, selective reflection spectra in the visible range were obtained for the emerging oblique helicoidal cholesteric structures (ChOH), with the wavelengths controllable both by electric field and appropriate UV irradiation. Possible applications for dynamic formation of contrast images are discussed.

Multiconfigurational Calculations and Photodynamics Describe Norbornadiene Photochemistry.

Storing solar energy is a vital component of using renewable energy sources to meet the growing demands of the global energy economy. Molecular solar thermal (MOST) energy storage is a promising means to store solar energy with on-demand energy release. The light-induced isomerization reaction of norbornadiene (NBD) to quadricyclane (QC) is of great interest because of the generally high energy storage density (0.97 MJ kg-1) and long thermal reversion lifetime (t1/2,300K = 8346 years). However, the mechanistic details of the ultrafast excited-state [2 + 2]-cycloaddition are largely unknown due to the limitations of experimental techniques in resolving accurate excited-state molecular structures. We now present a full computational study on the excited-state deactivation mechanism of NBD and its dimethyl dicyano derivative (DMDCNBD) in the gas phase. Our multiconfigurational calculations and nonadiabatic molecular dynamics simulations have enumerated the possible pathways with 557 S2 trajectories of NBD for 500 fs and 492 S1 trajectories of DMDCNBD for 800 fs. The simulations predicted the S2 and S1 lifetimes of NBD (62 and 221 fs, respectively) and the S1 lifetime of DMDCNBD (190 fs). The predicted quantum yields of QC and DCQC are 10 and 43%, respectively. Our simulations also show the mechanisms of forming other possible reaction products and their quantum yields.

G-quadruplex-based CRISPR photoswitch for spatiotemporal control of genomic modulation.

CRISPR (clustered regularly interspaced short palindromic repeats) technology holds tremendous promise for gene regulation and editing. However, precise control of CRISPR editing is essential to overcome its uncontrollable reaction process and excessive activity that leads to off-target editing. To overcome this problem, we engineered a photoswitch on G-quadruplex gRNA (GqRNA) for precisely controlled gene editing and expression by embedding dicationic azobenzene derivatives (AZD++). Our results demonstrated that rational design of the G-quadruplex onto crRNA conferred higher stability and sequence recognition specificity than unmodified single guide (sgRNA). Light-induced isomerization of AZD++ quickly transformed the on state of GqRNA, which facilitated rapid activation of ribonucleoprotein activity for genome editing of on-target sites in cells with excellent editing efficiency. In turn, AZD++-GqRNA promptly refolded to an off state to inhibit genomic cleavage, and limited the generation of off-target effects and by-products. Therefore, the proposed strategy of a photo-reversible modality presents a new opportunity for CRISPR-Cas9 modulation to improve its safety and applicability.

Structural diversity of photoswitchable sphingolipids for optodynamic control of lipid microdomains

Sphingolipids are a structurally diverse class of lipids predominantly found in the plasma membrane of eukaryotic cells. These lipids can laterally segregate with other rigid lipids and cholesterol into liquid-ordered domains that act as organizing centers within biomembranes. Owing the vital role of sphingolipids for lipid segregation, controlling their lateral organization is of utmost significance. Hence, we made use of the light-induced trans-cis isomerization of azobenzene-modified acyl chains to develop a set of photoswitchable sphingolipids with different headgroups (hydroxyl, galactosyl, phosphocholine) and backbones (sphingosine, phytosphingosine, tetrahydropyran-blocked sphingosine) that are able to shuttle between liquid-ordered and liquid-disordered regions of model membranes upon irradiation with UV-A (λ = 365 nm) and blue (λ = 470 nm) light, respectively. Using combined high-speed atomic force microscopy, fluorescence microscopy, and force spectroscopy, we investigated how these active sphingolipids laterally remodel supported bilayers upon photoisomerization, notably in terms of domain area changes, height mismatch, line tension, and membrane piercing. Hereby, we show that the sphingosine-based (Azo-β-Gal-Cer, Azo-SM, Azo-Cer) and phytosphingosine-based (Azo-α-Gal-PhCer, Azo-PhCer) photoswitchable lipids promote a reduction in liquid-ordered microdomain area when in the UV-adapted cis-isoform. In contrast, azo-sphingolipids having tetrahydropyran groups that block H-bonding at the sphingosine backbone (lipids named Azo-THP-SM, Azo-THP-Cer) induce an increase in the liquid-ordered domain area when in cis, accompanied by a major rise in height mismatch and line tension. These changes were fully reversible upon blue light-triggered isomerization of the various lipids back to trans, pinpointing the role of interfacial interactions for the formation of stable liquid-ordered domains.

Recent progress in nanotechnology-based drug carriers for resveratrol delivery

Resveratrol is a polyphenol with diverse pharmacological activities, but its clinical efficacy is limited due to low solubility/permeability, light-induced isomerization, auto-oxidation, and rapid metabolism. Nanodelivery systems, such as liposomes, polymeric nanoparticles, lipid nanocarriers, micelles, nanocrystals, inorganic nanoparticles, nanoemulsions, protein-based nanoparticles, exosomes, macrophages, and red blood cells (RBCs) have shown great potential for improving the solubility, biocompatibility, and therapeutic efficacy of resveratrol. This review comprehensively summarizes the recent advances in resveratrol nanoencapsulation and describes potential strategies to improve the pharmacokinetics of existing nanoformulations, enhance targeting, reduce toxicity, and increase drug release and encapsulation efficiency. The article also suggests that in order to avoid potential safety issues, resveratrol nanoformulations must be tested in vivo in a wide range of diseases.

Impact of protein-chromophore interaction on the retinal excited state and photocycle of Gloeobacter rhodopsin: role of conserved tryptophan residues.

The function of microbial as well as mammalian retinal proteins (aka rhodopsins) is associated with a photocycle initiated by light excitation of the retinal chromophore of the protein, covalently bound through a protonated Schiff base linkage. Although electrostatics controls chemical reactions of many organic molecules, attempt to understand its role in controlling excited state reactivity of rhodopsins and, thereby, their photocycle is scarce. Here, we investigate the effect of highly conserved tryptophan residues, between which the all-trans retinal chromophore of the protein is sandwiched in microbial rhodopsins, on the charge distribution along the retinal excited state, quantum yield and nature of the light-induced photocycle and absorption properties of Gloeobacter rhodopsin (GR). Replacement of these tryptophan residues by non-aromatic leucine (W222L and W122L) or phenylalanine (W222F) does not significantly affect the absorption maximum of the protein, while all the mutants showed higher sensitivity to photobleaching, compared to wild-type GR. Flash photolysis studies revealed lower quantum yield of trans-cis photoisomerization in W222L as well as W222F mutants relative to wild-type. The photocycle kinetics are also controlled by these tryptophan residues, resulting in altered accumulation and lifetime of the intermediates in the W222L and W222F mutants. We propose that protein-retinal interactions facilitated by conserved tryptophan residues are crucial for achieving high quantum yield of the light-induced retinal isomerization, and affect the thermal retinal re-isomerization to the resting state.

Ultraviolet (UV) light-induced geometrical isomerization of cinnamic acid containing molecules: A plausible, non-enzymatic approach to modify metabolite composition of plant extracts

• UV light can be used to enhance the cinnamic acid containing-metabolite composition of a plant. • LC-MS in combination with multivariate statistics can be used to probe for the presence of photo-induced metabolites in plant extracts. • UV-irradiated plant extracts have a coherent metabolite composition as compared to naturally growing plants. Cinnamic acid containing molecules are widely distributed in plants, and they are known to possess several pharmacological properties. Structurally, these molecules consist of C 6 C 3 skeletal backbone, with an olefin functional group on the C 3 part . Naturally, plants produce a broad spectrum of cinnamic acid derivatives with a trans configuration, however, cis isomers are formed due to excessive UV-light exposure, thereby increasing the already complex metabolomes of plants containing these compounds. In high sunlight intensive areas, the prevalence of the cis isomers of cinnamic acid containing molecules is becoming more prevalent and synonymous with extracts of many plants. It is therefore imperative to develop analytical and data handling strategies to account for the presence of these molecules, which can serve as a template for rational design of pharmacologically active plant extracts or smart photo-switchable drugs. Herein, we show that a combination of ultra-high performance liquid chromatography quadrupole time of flight mass spectrometry (UHPLC-QTOF-MS) and principal component analysis (PCA) allows differentiation of plants extracts of which metabolome modification through UV-radiation has been carried out. The results of the current study show that geometrical isomerism is a feasible, non-enzymatic approach to modify metabolite composition of plants. This simple method can be used to create “super” extracts of plants containing structurally diverse metabolites to be evaluated for various pharmacological properties in the future.