Mechanism Of Light Adaptation Research Articles

In search of the molecular mechanisms of adaptation memory in rods: basic activity of phosphodiesterase

Retinal rods, the photoreceptors responsible for twilight vision, are capable of adapting to a wide range of light levels. The molecular mechanisms of light adaptation have been well studied, but an interesting question is what changes occur in the phototransduction cascade after the adaptive light stimuli are eliminated. Previously, we showed the phenomenon of adaptation memory in amphibian rods: after background illumination photoreceptor sensitivity to light remained reduced for several minutes, while the dark current recovered within 20—30 s. This suggests the existence of additional, as yet unknown, regulatory mechanisms of the phototransduction cascade that act after the adaptive effect of light. In search of specific mechanisms that could explain the effect of adaptation memory, we performed electrophysiological experiments on isolated frog rods to evaluate the basal activity of the effector enzyme of the phototransduction cascade, the phosphodiesterase type 6, in the dark and after saturating background illumination. It was found that the post-adaptation state of rods was characterized by increased basal phosphodiesterase activity, which gradually decreased to the dark level within tens of seconds after turning off the adaptive illumination. These results also suggest that the components of the phototransduction cascade may undergo some unstudied changes after light adaptation.

Adaptation memory in photoreceptors: different mechanisms in rods and cones.

Vertebrate rods and cones operate over a wide range of ambient illumination, which is provided by light adaptation mechanisms regulating the sensitivity and speed of the phototransduction cascade. Three calcium-sensitive feedback loops are well established in both rods and cones: acceleration of the quenching of a light-activated visual pigment and cGMP synthesis by guanylate cyclase, and increased affinity of ion channels for cGMP. Accumulating evidence suggests that the molecular mechanisms of light adaptation are more complex. While investigating these putative mechanisms, we discovered a novel phenomenon, observing that the recovery of light sensitivity in rods after turning off non-saturating adaptive light can take tens of seconds. Moreover, after a formal return of the membrane current to the dark level, cell sensitivity to the stimuli remains decreased for a further 1-2 min. We termed this phenomenon of prolonged photoreceptor desensitization 'adaptation memory' (of previous illumination) and the current study is focused on its detailed investigation in rods and an attempt to find the same phenomenon in cones. In rods, we have explored the dependencies of this phenomenon on adapting conditions, specifically, the intensity and duration of adapting illumination. Additionally, we report that fish and frog red-sensitive cones possess similar features of adaptation memory, such as a drop in sensitivity just after the steps of bright light and slow sensitivity recovery. However, we have found that the rate of this process and its nature are not the same as in rods. Our results indicate that the nature of the temporary drop in the sensitivity in rods and cones after adapting steps of light is different. In the rods, adaptation memory could be attributed to the existence of long-lasting modifications of the components of the phototransduction cascade after adapting illumination. In cones, the observed form of the adaptation memory seems to be due to the sensitivity drop caused by a decrease in the availability of the visual pigment, that is, by bleaching.

Roles of ApcD and orange carotenoid protein in photoinduction of electron transport upon dark-light transition in the Synechocystis PCC 6803 mutant deficient in flavodiiron protein Flv1.

Flavodiiron proteins Flv1/Flv3 accept electrons from photosystem (PS) I. In this work we investigated light adaptation mechanisms of Flv1-deficient mutant of Synechocystis PCC 6803, incapable to form the Flv1/Flv3 heterodimer. First seconds of dark-light transition were studied by parallel measurements of light-induced changes in chlorophyll fluorescence, P700 redox transformations, fluorescence emission at 77K, and OCP-dependent fluorescence quenching. During the period of Calvin cycle activation upon dark-light transition, the linear electron transport (LET) in wild type is supported by the Flv1/Flv3 heterodimer, whereas in Δflv1 mutant activation of LET upon illumination is preceded by cyclic electron flow that maintains State 2. The State 2-State 1 transition and Orange Carotenoid Protein (OCP)-dependent non-photochemical quenching occur independently of each other, begin in about 10s after the illumination of the cells and are accompanied by a short-term re-reduction of the PSI reaction center (P700+). ApcD is important for the State 2-State 1 transition in the Δflv1 mutant, but S-M rise in chlorophyll fluorescence was not completely inhibited in Δflv1/ΔapcD mutant. LET in Δflv1 mutant starts earlier than the S-M rise in chlorophyll fluorescence, and the oxidation of plastoquinol (PQH2) pool promotes the activation of PSII, transient re-reduction of P700+ and transition to State 1. An attempt to induce state transition in the wild type under high intensity light using methyl viologen, highly oxidizing P700 and PQH2, was unsuccessful, showing that oxidation of intersystem electron-transport carriers might be insufficient for the induction of State 2-State 1 transition in wild type of Synechocystis under high light.

Dynamic Regulation of the Light-Harvesting System through State Transitions in Land Plants and Green Algae.

Photosynthesis constitutes the only known natural process that captures the solar energy to convert carbon dioxide and water into biomass. The primary reactions of photosynthesis are catalyzed by the photosystem II (PSII) and photosystem I (PSI) complexes. Both photosystems associate with antennae complexes whose main function is to increase the light-harvesting capability of the core. In order to maintain optimal photosynthetic activity under a constantly changing natural light environment, plants and green algae regulate the absorbed photo-excitation energy between PSI and PSII through processes known as state transitions. State transitions represent a short-term light adaptation mechanism for balancing the energy distribution between the two photosystems by relocating light-harvesting complex II (LHCII) proteins. The preferential excitation of PSII (state 2) results in the activation of a chloroplast kinase which in turn phosphorylates LHCII, a process followed by the release of phosphorylated LHCII from PSII and its migration to PSI, thus forming the PSI-LHCI-LHCII supercomplex. The process is reversible, as LHCII is dephosphorylated and returns to PSII under the preferential excitation of PSI. In recent years, high-resolution structures of the PSI-LHCI-LHCII supercomplex from plants and green algae were reported. These structural data provide detailed information on the interacting patterns of phosphorylated LHCII with PSI and on the pigment arrangement in the supercomplex, which is critical for constructing the excitation energy transfer pathways and for a deeper understanding of the molecular mechanism of state transitions progress. In this review, we focus on the structural data of the state 2 supercomplex from plants and green algae and discuss the current state of knowledge concerning the interactions between antenna and the PSI core and the potential energy transfer pathways in these supercomplexes.

Distinct mechanisms of light adaptation of elementary responses in photoreceptors of dipteran flies and American cockroach.

Of many light adaptation mechanisms optimizing photoreceptor functioning in the compound eyes of insects, those modifying the single-photon response, the quantum bump (QB), remain least studied. Here, by recording from photoreceptors of the blow fly Protophormia terraenovae, the hover fly Volucella pellucens, and the cockroach Periplaneta americana, we investigated mechanisms of rapid light adaptation by examining how properties of QBs change after light stimulation and multiquantal impulse responses during repetitive stimulation. In P. terraenovae, light stimulation reduced latencies, characteristic durations, and amplitudes of QBs in an intensity- and duration-dependent manner. In P. americana, only QB amplitudes decreased consistently. In both species, time constants of QB parameters' recovery increased with the strength and duration of stimulation, reaching ∼30 s after bright prolonged 10-s pulses. In the blow fly, changes in QB amplitudes during recovery correlated with changes in half-widths but not latencies, suggesting at least two separate mechanisms of light adaptation: acceleration of QB onset by sensitizing transduction channels and acceleration of transduction channel inactivation causing QB shortening and decrease. In the cockroach, light adaptation reduced QB amplitude by apparently lowering the transduction channel availability. Impulse response data in the blow fly and cockroach were consistent with the inferences from the QB recovery experiments. However, in the hover fly V. pellucens, impulse response latencies and durations decreased simultaneously, whereas amplitudes decreased little, even when bright flashes were applied at high frequencies. These findings indicate the existence of dissimilar mechanisms of light adaptation in the microvilli of different species.NEW & NOTEWORTHY By studying light adaptation of elementary responses in photoreceptors of the blow fly and the cockroach we found three distinct mechanisms. In the blow fly, one mechanism speeds quantum bump onset and another accelerates quantum bump inactivation, decreasing its size. In the cockroach, quantum bump amplitude decreases without changes in kinetics, indicating decreased availability of transduction channels. The findings can be explained by expression of different transduction channels in the flies and cockroaches.

Leaf anatomy, photosynthesis, and chloroplast ultrastructure of Heptacodium miconioides seedlings reveal adaptation to light environment

Light intensity is a critical factor for the plant survival and early growth. Heptacodium miconioides , a well-accepted ornamental plant, has been endangered due to fragmented habitats in the wild. To better understand the light adaptation mechanisms of H. miconioides , we investigated the morphology, photosynthesis, chloroplast ultrastructure, and chloroplast gene expression of the leaves under high light (HL), moderate light (ML), and low light (LL) conditions. With decreasing light intensity, the specific leaf area and chlorophyll contents of H. miconioides increased, whereas the leaf size first increased followed by a decrease. The maximum net photosynthetic rate under ML and HL treatments were significantly higher than that under LL treatment. However, leaves under ML treatment exhibited the lower dark respiration rate and light compensation point than those under HL treatment. The leaf thickness, palisade tissue, spongy tissue, and stomatal density were obviously reduced with decreasing light intensity. Chloroplast ultrastructure showed the better development in leaves under ML condition, and the size of chloroplast, the number of starch grains and plastoglobules increased significantly. In addition, the expression levels of genes involved in chlorophyll biosynthesis ( HEMA , CLH , CHLI , CHLH , CHLG ) were higher under ML than LL treatment, but lower under HL treatment. The up-regulation of the photosystem II ( PsbB , PsbD , PsbO ) genes expression play an important role in under ML and LL treatments. Taken together, we proposed that the optimal growth of H. miconioides seedlings varies between HL and ML but had poor growth under LL condition. The improvement in H. miconioides growth under moderate shade was mainly through its effects on leaf morphology, chloroplast development, and light capture efficiency of PSII phase. • Adaptation mechanisms to different light intensity were investigated in Heptacodium miconioides . • Seedlings grown under moderate and high light intensities exhibited higher photosynthetic capacity. • Moderate light intensity increased the size of chloroplast and the accumulation of starch grains and plastoglobules. • Moderate light intensity up-regulated chlorophyll biosynthesis and photosystem II (PSII) related gene expression.

Identification of a dual orange/far-red and blue light photoreceptor from an oceanic green picoplankton

Photoreceptors are conserved in green algae to land plants and regulate various developmental stages. In the ocean, blue light penetrates deeper than red light, and blue-light sensing is key to adapting to marine environments. Here, a search for blue-light photoreceptors in the marine metagenome uncover a chimeric gene composed of a phytochrome and a cryptochrome (Dualchrome1, DUC1) in a prasinophyte, Pycnococcus provasolii. DUC1 detects light within the orange/far-red and blue spectra, and acts as a dual photoreceptor. Analyses of its genome reveal the possible mechanisms of light adaptation. Genes for the light-harvesting complex (LHC) are duplicated and transcriptionally regulated under monochromatic orange/blue light, suggesting P. provasolii has acquired environmental adaptability to a wide range of light spectra and intensities.

Short-term monocular deprivation induces an interocular delay

Short term monocular deprivation modulates ocular dominance, such that the previously deprived eye’s contribution to the binocular percept increases, supposedly as a result of changes in contrast-gain. Therefore, the processing time of the previously patched eye would be expected to speed up as a result of an increase in contrast gain. In order to test this hypothesis, this study examines the effects of short-term monocular deprivation on interocular synchronicity. The present study uses a paradigm based on the Pulfrich phenomenon. The stimulus used for testing consists of elements defining a cylinder rotating in depth, that allows measurement of any interocular delay. The interocular delay was measured at baseline before patching and at outcome, after one hour of monocular deprivation with an opaque or translucent patch. Contrary to expectations, short-term monocular deprivation induces an interocular delay, albeit not always significant, in the previously patched eye. The amplitude of this effect is larger with opaque patching compared to translucent patching. These results are the first report of a non-beneficial effect – i.e. a slowing down in the processing time of the previously patched-eye. They indicate that the plasticity effects of monocular deprivation are not exclusively mediated by contrast gain mechanisms and that light adaptation mechanisms might also be involved in the plasticity resulting from short-term monocular deprivation.

Morphological and electrophysiological specializations of photoreceptors in the love spot of hover fly Volucella pellucens.

Studies of functional variability in the compound eyes of flies reveal superior temporal resolution of photoreceptors from the frontal areas that mediate binocular vision, and in males mate recognition and pursuit. However, the mechanisms underlying differences in performance are not known. Here, we investigated properties of hover fly Volucella pellucens photoreceptors from two regions of the retina, the frontal-dorsal "love spot" and the lateral one. Morphologically, the microvilli of the frontal-dorsal photoreceptors were relatively few in number per rhabdomere cross-section, short and narrow. In electrophysiological experiments involving stimulation with prolonged white-noise and natural time intensity series, frontal-dorsal photoreceptors demonstrated comparatively high corner frequencies and information rates. Investigation of possible mechanisms responsible for their superior performance revealed significant differences in the properties of quantum bumps, and, unexpectedly, relatively high absolute sensitivity of the frontal-dorsal photoreceptors. Analysis of light adaptation indicated that photoreceptors from two regions adapt similarly but because frontal-dorsal photoreceptors were depolarized much stronger by the same stimuli than the lateral photoreceptors, they reached a deeper state of adaptation associated with higher corner frequencies of light response. Recordings from the photoreceptor axons were characterized by spike-like events that can significantly expand the frequency response range. Seamless integration of spikes into the graded voltage responses was enabled by light adaptation mechanisms that accelerate kinetics and decrease duration of depolarizing light response transients.

Calmodulin binds to Drosophila TRP with an unexpected mode

Drosophila TRP is a calcium-permeable cation channel essential for fly visual signal transduction. During phototransduction, Ca2+ mediates both positive and negative feedback regulation on TRP channel activity, possibly via binding to calmodulin (CaM). However, the molecular mechanism underlying Ca2+ modulated CaM/TRP interaction is poorly understood. Here, we discover an unexpected, Ca2+-dependent binding mode between CaM and TRP. The TRP tail contains two CaM binding sites (CBS1 and CBS2) separated by an ∼70-residue linker. CBS1 binds to the CaM N-lobe and CBS2 recognizes the CaM C-lobe. Structural studies reveal the lobe-specific binding of CaM to CBS1&2. Mutations introduced in both CBS1 and CBS2 eliminated CaM binding in full-length TRP, but surprisingly had no effect on the response to light under physiological conditions, suggesting alternative mechanisms governing Ca2+-mediated feedback on the channel activity. Finally, we discover that TRPC4, the closest mammalian paralog of Drosophila TRP, adopts a similar CaM binding mode.

Light adaptation mechanisms in the eye of the fiddler crab Afruca tangeri.

A great diversity of adaptations is found among animals with compound eyes and even closely related taxa can show variation in their light-adaptation strategies. A prime example of a visual system evolved to function in specific light environments is the fiddler crab, used widely as a model to research aspects of crustacean vision and neural pathways. However, questions remain regarding how their eyes respond to the changes in brightness spanning many orders of magnitude, associated with their habitat and ecology. The fiddler crab Afruca tangeri forages at low tide on tropical and semi-tropical mudflats, under bright sunlight and on moonless nights, suggesting that their eyes undergo effective light adaptation. Using synchrotron X-ray tomography, light and transmission electron microscopy and in vivo ophthalmoscopy, we describe the ultrastructural changes in the eye between day and night. Dark adaptation at dusk triggered extensive widening of the rhabdoms and crystalline cone tips. This doubled the ommatidial acceptance angles and increased microvillar surface area for light capture in the rhabdom, theoretically boosting optical sensitivity 7.4 times. During daytime, only partial dark-adaptation was achieved and rhabdoms remained narrow, indicating strong circadian control on the process. Bright light did not evoke changes in screening pigment distributions, suggesting a structural inability to adapt rapidly to the light level fluctuations frequently experienced when entering their burrow to escape predators. This should enable fiddler crabs to shelter for several minutes without undergoing significant dark-adaptation, their vision remaining effectively adapted for predator detection when surfacing again in bright light.

Medicinal value and mechanism of light adaptation in Lepidium latifolium in Ladakh region

Medicinal plants have been used form ancient times in treatment of many diseases. These plants are the cheap source of drugs and have very fewer side effects. Lepidium latifolium is an invasive plant belongs to Brassicaceae family. It found in the mountainous area of Ladakh. It used as a phytofood in the Ladakh area. It is used in treatment of many diseases due to its medicinal properties. It has several natural antioxidants which suppress the biological system. From ancient times, it mainly used as stomach tonics and diuretics. Although it also used in the treatment of other diseases like kidney related diseases, hypertension, diabetes and many more. It also has anti-tumor properties. Due to the mountainous region, Ladakh has very low temperature. Due to its physiological plasticity,  epidium latifolium can grow in the extremely harsh conditions of Ladakh area. In this review, we will discuss about the medicinal properties and the light adaptation of Lepidium latifolium in Ladakh area.

Improved Color Opponent Contour Detection Model Based on Dark and Light Adaptation

Brightness and color are two basic visual features of the human visual system. In the retina, color-sensitive cells are sensitive to brightness and color information and exhibit salient direction selectivity. However, evidence from neurobiology indicates that apart from color features, the rod and cone cells of the retina are also sensitive to high or low luminance, respectively termed the light and dark adaptation mechanisms. Classical single-opponent and color-opponent contour detection model frameworks include the computational processes of single red (R), green (G), blue (B) and yellow (Y) channels and opponent R–GB–Y channels, respectively. Thus, to combine luminance cues and traditional color cues to improve boundary detection in natural scenes, we propose the use of a dark and a light channel to simulate light and dark adaptation mechanisms. The results of the proposed model considering three datasets (BSDS300, BSDS500, NYUD) demonstrate an improvement compared with current bio-inspired contour detection models.

Effects of excess light energy on excitation-energy dynamics in a pennate diatom Phaeodactylum tricornutum.

Controlling excitation energy flow is a fundamental ability of photosynthetic organisms to keep a better performance of photosynthesis. Among the organisms, diatoms have unique light-harvesting complexes, fucoxanthin chlorophyll (Chl) a/c-binding proteins. We have recently investigated light-adaptation mechanisms of a marine centric diatom, Chaetoceros gracilis, by spectroscopic techniques. However, it remains unclear how pennate diatoms regulate excitation energy under different growth light conditions. Here, we studied light-adaptation mechanisms in a marine pennate diatom Phaeodactylum tricornutum grown at 30µmol photons m-2s-1 and further incubated for 24h either in the dark, or at 30 or 300µmol photons m-2s-1 light intensity, by time-resolved fluorescence (TRF) spectroscopy. The high-light incubated cells showed no detectable oxygen-evolving activity of photosystem II, indicating the occurrence of a severe photodamage. The photodamaged cells showed alterations of steady-state absorption and fluorescence spectra and TRF spectra compared with the dark and low-light adapted cells. In particular, excitation-energy quenching is significantly accelerated in the photodamaged cells as shown by mean lifetime analysis of the Chl fluorescence. These spectral changes by the high-light treatment may result from arrangements of pigment-protein complexes to maintain the photosynthetic performance under excess light illumination. These growth-light dependent spectral properties in P. tricornutum are largely different from those in C. gracilis, thus providing insights into the different light-adaptation mechanisms between the pennate and centric diatoms.

Dopamine D1 receptor activation reduces local inner retinal inhibition to light-adapted levels.

During adaptation from dim to bright environments, changes in retinal signaling are mediated, in part, by dopamine. Dopamine is released with light and can modulate retinal receptive fields, neuronal coupling, inhibitory receptors, and rod pathway inhibition. However, it is unclear how dopamine affects inner retinal inhibition to cone bipolar cells, which relay visual information from photoreceptors to ganglion cells and are important signal processing sites. We tested the hypothesis that dopamine (D)1 receptor activation is sufficient to elicit light-adapted inhibitory changes. Local light-evoked inhibition and spontaneous activity were measured from OFF cone bipolar cells in dark-adapted mouse retinas while stimulating D1 receptors, which are located on bipolar, horizontal, and inhibitory amacrine cells. The D1 agonist SKF38393 reduced local inhibitory light-evoked response magnitude and increased response transience, which mimicked changes measured with light adaptation. D1-mediated reductions in local inhibition were more pronounced for glycinergic than GABAergic inputs, comparable with light adaptation. The effects of D1 receptors on light-evoked input were similar to the effects on spontaneous input. D1 receptor activation primarily decreased glycinergic spontaneous current frequency, similar to light adaptation, suggesting mainly a presynaptic amacrine cell site of action. These results expand the role of dopamine to include signal modulation of cone bipolar cell local inhibition. In this role, D1 receptor activation, acting primarily through glycinergic amacrine cells, may be an important mechanism for the light-adapted reduction in OFF bipolar cell inhibition since the actions are similar and dopamine is released during light adaptation. NEW & NOTEWORTHY Retinal adaptation to different luminance conditions requires the adjustment of local circuits for accurate signaling of visual scenes. Understanding mechanisms behind luminance adaptation at different retinal levels is important for understanding how the retina functions in a dynamic environment. In the mouse, we show that dopamine pathways reduce inner retinal inhibition similar to increased background luminance, suggesting the two are linked and highlighting a possible mechanism for light adaptation at an early retinal processing center.

Luminescence light collection technology in the aragonite of stone corals

Stone corals do not use calcium carbonate in the form of calcite, which has a calculated energy gap of 3.93 eV, but in the form of aragonite, which has a calculated energy gap of 2.88 eV (here experimentally determined to amount to 2.46 eV) as a building material. This enables the coral to harvest blue light, which is penetrating and filtering deep into the surface water of the ocean. White luminescence, which is composed of different wave lengths, is generated, and then conducted and redistributed within the aragonite structure to be supplied to the symbiotic photosynthetic algae. This mechanism of light concentration and adaptation via the aragonite structure leads to a smaller amount of light-absorbing phosphorescent pigments being required for the symbionts to survive. The resulting advantages are a significantly smaller exposure to photo-degradation, less effort for chemical synthesis and higher efficiency for solar energy conversion. The mechanism of luminescence light collection in the aragonite network is discussed on the basis of spectroscopic measurements on thin coral slices and in context with its architecture and the coral’s living activities. The relevance of the stone coral’s fractal geometry, both for broadband solar light harvesting and luminescence light collection within non-imaging optics, is emphasized. It is proposed that synthetic aragonite should be developed as a solar energy material.

Circadian and irradiance effects on expression of antenna protein genes and pigment contents in dinoflagellate Prorocentrum donghaiense (Dinophycae)

PCP and acpPC are the two major antennae proteins that bind pigments in peridinin-containing dinoflagellates. The relationship between antennae proteins and cellular pigments at molecular level is still poorly understood. Here we identified and characterized the two antennae protein genes in dinoflagellate Prorocentrum donghaiense under different light conditions. The mature PCP protein was 32 kDa, while acpPC was a polyprotein each of 19 kDa. Both genes showed higher expression under low light than under high light, suggesting their possible role in a low light adaptation mechanism. The two genes showed differential diel expression rhythm, with PCP being more highly expressed in the dark than in the light period and acpPC the other way around. HPLC analysis of cellular pigments indicated a diel change of chlorophyll c2, but invariability of other pigments. A stable peridinin: chlorophyll a pigment ratio was detected under different light intensities and over the diel cycle, although the diadinoxanthin:chlorophyll a ratio increased significantly with light intensity. The results suggest that 1) PCP and acpPC genes are functionally distinct, 2) PCP and acpPC can function under low light as an adaptive mechanism in P. donghaiense, 3). the ratios of diadinoxanthin:chlorophyll a and peridinin: chlorophyll a can potentially be used as an indicator of algal photophysiological status and a pigment signature respectively under different light conditions in P. donghaiense.

Effect of eccentricity and light level on the timing of light adaptation mechanisms.

We explored the complexity of the light adaptation process, assessing adaptation recovery (Ar) at different eccentricities and light levels. Luminance thresholds were obtained with transient background fields at mesopic and photopic light levels for temporal retinal eccentricities (0°-15°) with test/background stimulus size of 0.5°/1° using a staircase procedure in a two-channel Maxwellian view optical system. Ar was obtained in comparison with steady data [Vis. Res.125, 12 (2016)VISRAM0042-698910.1016/j.visres.2016.04.008]. Light level proportionally affects Ar only at fovea. Photopic extrafoveal thresholds were one log unit higher for transient conditions. Adaptation was equally fast at low light levels for different retinal locations with variations mainly affected by noise. These results evidence different timing in the mechanisms of adaptation involved.

Selective Modulation of the Pupil Light Reflex by Microstimulation of Prefrontal Cortex

The prefrontal cortex (PFC) is thought to flexibly regulate sensorimotor responses, perhaps through modulating activity in other circuits. However, the scope of that control remains unknown: it remains unclear whether the PFC can modulate basic reflexes. One canonical example of a central reflex is the pupil light reflex (PLR): the automatic constriction of the pupil in response to luminance increments. Unlike pupil size, which depends on the interaction of multiple physiological and neuromodulatory influences, the PLR reflects the action of a simple brainstem circuit. However, emerging behavioral evidence suggests that the PLR may be modulated by cognitive processes. Although the neural basis of these modulations remains unknown, one possible source is the PFC, particularly the frontal eye field (FEF), an area of the PFC implicated in the control of attention. We show that microstimulation of the rhesus macaque FEF alters the magnitude of the PLR in a spatially specific manner. FEF microstimulation enhanced the PLR to probes presented within the stimulated visual field, but suppressed the PLR to probes at nonoverlapping locations. The spatial specificity of this effect parallels the effect of FEF stimulation on attention and suggests that FEF is capable of modulating visuomotor transformations performed at a lower level than was previously known. These results provide evidence of the selective regulation of a basic brainstem reflex by the PFC.SIGNIFICANCE STATEMENT The pupil light reflex (PLR) is our brain's first and most fundamental mechanism for light adaptation. Although it is often described in textbooks as being an immutable reflex, converging evidence suggests that the magnitude of the PLR is modulated by cognitive factors. The neural bases of these modulations are unknown. Here, we report that microstimulation in the prefrontal cortex (PFC) modulates the gain of the PLR, changing how a simple reflex circuit responds to physically identical stimuli. These results suggest that control structures such as the PFC can add complexity and flexibility to even a basic brainstem circuit.

Atom-Resolved View of a Cell Organelle on a Computational Microscope

Photosynthetic organelles have been optimized by over two billion years of evolution into highly efficient energy-harvesting machines that surpass man-made solar devices in robustness, adaptation to environmental stress, and efficiency of energy conversion. Leveraging a nanoscale network of bioenergetic proteins, these fascinating properties emerge from the confluence of hundreds of biochemical reactions across the entire organelle. I present the first all-atom model of an entire cell organelle, namely that of a bacterial chromatophore. Construction of this model drives pioneering advances in crystallography and electron-microscopy based structure determination techniques, namely through the innovation of molecular dynamics flexible fitting (MDFF) methodologies in xMDFF and ReMDFF (eLife 2016, 5, e16105; JACS 2015, 137, 8810; Acta. Cryst. D 2014, 70, 2344). Multiscale computations starting with this 100 million-atom model deliver novel insights on the organelle's membrane curvature and charge transport properties, mechanisms of light adaptation, and impact on cellular aging. The results have been confirmed employing atomic force microscopy and biochemical assays. Preliminary results are reported in JACS 2016, 138, 12077 and eLife 2016, 5, e09541.