Ligand Nuclei Research Articles

Ligand Effects on the Spin Relaxation Dynamics and Coherent Manipulation of Organometallic La(II) Potential Qudits.

We present pulsed electron paramagnetic resonance (EPR) studies on three La(II) complexes, [K(2.2.2-cryptand)][La(Cp')3] (1), [K(2.2.2-cryptand)][La(Cp″)3] (2), and [K(2.2.2-cryptand)][La(Cptt)3] (3), which feature cyclopentadienyl derivatives as ligands [Cp' = C5H4SiMe3; Cp″ = C5H3(SiMe3)2; Cptt = C5H3(CMe3)2] and display a C3 symmetry. Long spin-lattice relaxation (T1) and phase memory (Tm) times are observed for all three compounds, but with significant variation in T1 among 1-3, with 3 being the slowest relaxing due to higher s-character of the SOMO. The dephasing times can be extended by more than an order of magnitude via dynamical decoupling experiments using a Carr-Purcell-Meiboom-Gill (CPMG) sequence, reaching 161 μs (5 K) for 3. Coherent spin manipulation is performed by the observation of Rabi quantum oscillations up to 80 K in this nuclear spin-rich environment (1H, 13C, and 29Si). The high nuclear spin of 139La (I = 7/2), and the ability to coherently manipulate all eight hyperfine transitions, makes these molecules promising candidates for application as qudits (multilevel quantum systems featuring d quantum states; d >2) for performing quantum operations within a single molecule. Application of HYSCORE techniques allows us to quantify the electron spin density at ligand nuclei and interrogate the role of functional groups to the electron spin relaxation properties.

Magnetic field dependence of the para-ortho conversion rate of molecular hydrogen in SABRE experiments

The use of parahydrogen – the isomer of molecular hydrogen with zero nuclear spin – is important for promising and actively developing methods for spin hyperpolarization of nuclei called parahydrogen induced polarization (PHIP). However, the dissolved parahydrogen in PHIP experiments quickly loses its spin order, resulting in the formation of orthohydrogen and reduction of the overall nuclear polarization of the substrate. This process is due to the difference of chemical shifts of hydride protons, as well as spin–spin couplings between nuclei, in the intermediate catalytic complexes, and it has not been rigorously explained so far. We proposed a new experimental technique based on magnetic field cycling for measuring the rate of molecular hydrogen para–ortho conversion in solution and applied it for non-hydrogenative PHIP Signal Amplification By Reversible Exchange (SABRE) experiments. The para–ortho conversion rate was measured over a wide range of magnetic field from 0.5 mT to 9.4 T. It was found that the conversion rate strongly depends on the magnetic field in which the reaction occurs, as well as on the concentrations of reactants. The rate decreases with increasing the concentration of pyridine ligand and increases with increasing the concentration of iridium catalyst. The model, which takes into account the reversible exchange of molecular hydrogen with the catalyst, nuclear spin–spin interaction of hydride protons with nuclei of ligands within catalytic complex and nuclear Zeeman interactions, qualitatively describes the experimental data. Two types of complexes with different spin system symmetry contribute to the molecular hydrogen conversion. In asymmetric complexes possessing hydride protons with different chemical shifts due to the presence of chlorine anion ligand the para–ortho conversion rate increases with magnetic field, while for symmetric complexes this mechanism is not operable. In the magnetic field where level anti-crossing occurs the resonant feature for the rate of para–ortho conversion is found. The results of this work can be utilized for finding the optimal conditions for obtaining the maximum hyperpolarization in the experiments employing parahydrogen.

Spectrum of dislocation mobility resonances in NaCl crystals under ultralow magnetic fields in EPR scheme

Dislocation motions are studied in NaCl crystals exposed to an EPR impact under crossed ultralow magnetic fields, the Earth field BEarth ∼ 50 µT, and the AC pumping field B̃(ν) of the amplitude 2.5 µT in the frequency band of 6 kHz to 2.1 MHz. Mean dislocation paths form a spectrum of multiple peaks at definite resonance frequencies. Dislocation motions are supposed to be caused by spin-dependent transformation of impurity centers, which, in turn, provide depinning of dislocations and relaxation of their structure. The observed spectrum is attributed to specific features of the hyperfine EPR at the applied field BEarth small as compared with the crystalline local fields Bloc created by nuclei of Cl ligands surrounding the Ca pinning centers. The developed theory well describes peak positions in the observed frequency spectrum.

Observation of ordered organic capping ligands on semiconducting quantum dots via powder X-ray diffraction

Powder X-ray diffraction is one of the key techniques used to characterize the inorganic structure of colloidal nanocrystals. The comparatively low scattering factor of nuclei of the organic capping ligands and their propensity to be disordered has led investigators to typically consider them effectively invisible to this technique. In this report, we demonstrate that a commonly observed powder X-ray diffraction peak around q=1.4{AA}^{-1} observed in many small, colloidal quantum dots can be assigned to well-ordered aliphatic ligands bound to and capping the nanocrystals. This conclusion differs from a variety of explanations ascribed by previous sources, the majority of which propose an excess of organic material. Additionally, we demonstrate that the observed ligand peak is a sensitive probe of ligand shell ordering. Changes as a function of ligand length, geometry, and temperature can all be readily observed by X-ray diffraction and manipulated to achieve desired outcomes for the final colloidal system.

Dy-DTPA as supersensitive shifting and relaxational probe for NMR/MRI control of local temperature

The article develops an approach in which paramagnetic lanthanide complexes are considered and studied as NMR / MRI relaxational and shifting probes for determining local temperature and prospective diagnostics. A detailed NMR study of the paramagnetic properties of Na2[Dy(DTPA)(H2O)] (I) complex is an example of the application of this approach. The substantial temperature dependence of the transverse relaxation on the ligand nuclei at high magnetic fields is due to the Curie spin contribution to the paramagnetic relaxation rate enhancement. A significant temperature dependence of relaxivity r2 was experimentally detected. The activation free energy of the racemization ΔG≠(298) in I is found to be 50 kJ mol−1. The coordination compound I can also serve as the most sensitive 1H NMR relaxational and shifting lanthanide paramagnetic probe for in situ temperature control in liquid medium.

A new approach to determining the structure of lanthanide complexes in solution according to the Curie-spin contribution to the paramagnetic spin-spin relaxation rate enhancements: Ho-DOTA

In this work, we propose for the first time a new type of NMR method for obtaining structural information on Ln complexes in solutions based on the analysis of the Curie-spin contribution to the paramagnetic spin-spin relaxation rate enhancements on the ligand nuclei. The application of the proposed methodology was carried out in this work by the example of studying the structure of the complex anion [Ho(DOTA)(H2O)]− (I) in D2O. Earlier we carried out the assignment of signals [S.P. Babailov, P.V. Dubovskii, E.N. Zapolotsky, Polyhedron 79 (2014) 277], investigated the molecular conformational dynamics and the dependence of the spin-spin relaxation rate on the magnetic field of complex I. Actually, the Curie spin contribution to the paramagnetic spin-spin relaxation rate enhancements on the ligand nuclei of this complex was determined by varying the constant magnetic field and temperature. As a result, it was found that the structure of the complex in solution is identical to its structure in the crystalline phase (found by the X-ray diffraction).

Insight of the Metal-Ligand Interaction in f-Element Complexes by Paramagnetic NMR Spectroscopy.

The magnetic properties of LnIII and AnIII complexes formed with dipicolinate ligands have been studied by NMR spectroscopy. To know precisely the geometries of these complexes, a crystallographic study by single-crystal X-ray diffraction (XRD) and extended X-ray absorption fine structure (EXAFS) in solution was performed. Several methods to separate the paramagnetic shifts observed in the NMR spectra were applied to these complexes. Methods using a number of nuclei of the dipicolinate ligands revealed an abrupt change in the geometries of the complexes and a metal-ligand interaction in the middle of the lanthanide series. A study of the variation of the paramagnetic shifts with temperature demonstrated that higher-order terms of the dipolar and contact contributions are required, especially for the lightest LnIII and almost all the studied AnIII . Bleaney's parameters <Sz >a and relating to the contact and dipolar terms, respectively, were deduced from experimental data and compared with the results of ab initio calculations. Quite a good agreement was found for the temperature dependencies of <Sz >a and . However, the values obtained from cation magnetic anisotropy calculations showed some discrepancies with the values derived from Bleaney's equation defined for LnIII . Other parameters, such as the crystal field parameter and the hyperfine constants Fi obtained from the experimental data of the [An(ethyl-dpa)3 ]3- complexes (ethyl-dpa=4-ethyl-2,6-dipicolinic acid), are at odds with the assumptions underlying Bleaney's theory.

Allosteres to regulate neurotransmitter sulfonation

Catecholamine neurotransmitter levels in the synapses of the brain shape human disposition-cognitive flexibility, aggression, depression, and reward seeking-and manipulating these levels is a major objective of the pharmaceutical industry. Certain neurotransmitters are extensively sulfonated and inactivated by human sulfotransferase 1A3 (SULT1A3). To our knowledge, sulfonation as a therapeutic means of regulating transmitter activity has not been explored. Here, we describe the discovery of a SULT1A3 allosteric site that can be used to inhibit the enzyme. The structure of the new site is determined using spin-label-triangulation NMR. The site forms a cleft at the edge of a conserved ∼30-residue active-site cap that must open and close during the catalytic cycle. Allosteres anchor into the site via π-stacking interactions with two residues that sandwich the planar core of the allostere and inhibit the enzyme through cap-stabilizing interactions with substituents attached to the core. Changes in cap free energy were calculated ab initio as a function of core substituents and used to design and synthesize a series of inhibitors intended to progressively stabilize the cap and slow turnover. The inhibitors bound tightly (34 nm to 7.4 μm) and exhibited progressive inhibition. The cap-stabilizing effects of the inhibitors were experimentally determined and agreed remarkably well with the theoretical predictions. These studies establish a reliable heuristic for the design of SULT1A3 allosteric inhibitors and demonstrate that the free-energy changes of a small, dynamic loop that is critical for SULT substrate selection and turnover can be calculated accurately.

Forbidden Coherence Transfer of 19F Nuclei to Quantitatively Measure the Dynamics of a CF₃-Containing Ligand in Receptor-Bound States.

The dynamic property of a ligand in the receptor-bound state is an important metric to characterize the interactions in the ligand–receptor interface, and the development of an experimental strategy to quantify the amplitude of motions in the bound state is of importance to introduce the dynamic aspect into structure-guided drug development (SGDD). Fluorine modifications are frequently introduced at the hit-to-lead optimization stage to enhance the binding potency and other characteristics of a ligand. However, the effects of fluorine modifications are generally difficult to predict, owing to the pleiotropic nature of the interactions. In this study, we report an NMR-based approach to experimentally evaluate the local dynamics of trifluoromethyl (CF3)-containing ligands in the receptor-bound states. For this purpose, the forbidden coherence transfer (FCT) analysis, which has been used to study the dynamics of methyl moieties in proteins, was extended to the 19F nuclei of CF3-containing ligands. By applying this CF3–FCT analysis to a model interaction system consisting of a ligand, AST-487, and a receptor, p38α, we successfully quantified the amplitude of the CF3 dynamics in the p38α-bound state. The strategy would bring the CF3-containing ligands within the scope of dynamic SGDD to improve the affinity and specificity for the drug-target receptors.

Actinide covalency measured by EPR

Mounting evidence suggests that actinide bonds have notable covalent character, making their chemistry more akin to transition metals than lanthanides. That covalency can be directly measured using pulsed electron paramagnetic resonance spectroscopy, yielding some surprising results, reports a team from the University of Manchester (Nat. Chem. 2016, DOI: 10.1038/nchem.2692). So-called superhyperfine coupling of a metal’s unpaired electrons with ligand nuclei that have non-zero spin can be used to assess covalency, but signals couldn’t be resolved by older EPR techniques. Using newer pulsed methods, Floriana Tuna, Eric J. L. McInnes, David P. Mills, and coworkers studied thorium(III) and uranium(III) organometallic complexes with ligands derived from the cyclopentadienyl anion (Cp). Computational analysis of the Th and U complexes suggested that they had very similar, weakly covalent bonds. But the EPR measurements indicate that the complexes differ, with much more covalency in U-Cp bonds than in Th-Cp bon...

Actinide covalency measured by pulsed electron paramagnetic resonance spectroscopy.

Our knowledge of actinide chemical bonds lags far behind our understanding of the bonding regimes of any other series of elements. This is a major issue given the technological as well as fundamental importance of f-block elements. Some key chemical differences between actinides and lanthanides-and between different actinides-can be ascribed to minor differences in covalency, that is, the degree to which electrons are shared between the f-block element and coordinated ligands. Yet there are almost no direct measures of such covalency for actinides. Here we report the first pulsed electron paramagnetic resonance spectra of actinide compounds. We apply the hyperfine sublevel correlation technique to quantify the electron-spin density at ligand nuclei (via the weak hyperfine interactions) in molecular thorium(III) and uranium(III) species and therefore the extent of covalency. Such information will be important in developing our understanding of the chemical bonding, and therefore the reactivity, of actinides.

Copper ESEEM and HYSCORE through ultra-wideband chirp EPR spectroscopy.

The main limitation of pulse electron paramagnetic resonance (EPR) spectroscopy is its narrow excitation bandwidth. Ultra-wideband (UWB) excitation with frequency-swept chirp pulses over several hundreds of megahertz overcomes this drawback. This allows to excite electron spin echo envelope modulation (ESEEM) from paramagnetic copper centers in crystals, whereas up to now, only ESEEM of ligand nuclei like protons or nitrogens at lower frequencies could be detected. ESEEM spectra are recorded as two-dimensional correlation experiments, since the full digitization of the electron spin echo provides an additional Fourier transform EPR dimension. Thus, UWB hyperfine-sublevel correlation experiments generate a novel three-dimensional EPR-correlated nuclear modulation spectrum.

Experimental Measurement and Theoretical Assessment of Fast Lanthanide Electronic Relaxation in Solution with Four Series of Isostructural Complexes

The rates of longitudinal relaxation for ligand nuclei in four isostructural series of lanthanide(III) complexes have been measured by solution state NMR at 295 K at five magnetic fields in the range 4.7-16.5 T. The electronic relaxation time T(le) is a function of both the lanthanide ion and the local ligand field. It needs to be considered when relaxation probes for magnetic resonance applications are devised because it affects the nuclear relaxation, especially over the field range 0.5 to 4.7 T. Analysis of the data, based on Bloch-Redfield-Wangsness theory describing the paramagnetic enhancement of the nuclear relaxation rate has allowed reliable estimates of electronic relaxation times, T(1e), to be obtained using global minimization methods. Values were found in the range 0.10-0.63 ps, consistent with fluctuations in the transient ligand field induced by solvent collision. A refined theoretical model for lanthanide electronic relaxation beyond the Redfield approximation is introduced, which accounts for the magnitude of the ligand field coefficients of order 2, 4, and 6 and their relative contributions to the rate 1/T(le). Despite the considerable variation of these contributions with the nature of the lanthanide ion and its fluctuating ligand field, the theory explains the modest change of measured T(le) values and their remarkable statistical ordering across the lanthanide series. Both experiment and theory indicate that complexes of terbium and dysprosium should most efficiently promote paramagnetic enhancement of the rate of nuclear relaxation.

Solution Structure of Ln(III) Complexes with Macrocyclic Ligands Through Theoretical Evaluation of 1H NMR Contact Shifts

Herein, we present a new approach that combines DFT calculations and the analysis of Tb(III)-induced (1)H NMR shifts to quantitatively and accurately account for the contact contribution to the paramagnetic shift in Ln(III) complexes. Geometry optimizations of different Gd(III) complexes with macrocyclic ligands were carried out using the hybrid meta-GGA TPSSh functional and a 46 + 4f(7) effective core potential (ECP) for Gd. The complexes investigated include [Ln(Me-DODPA)](+) (H(2)Me-DODPA = 6,6'-((4,10-dimethyl-1,4,7,10-tetraazacyclododecane-1,7-diyl)bis(methylene))dipicolinic acid, [Ln(DOTA)(H(2)O)](-) (H(4)DOTA = 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetate), [Ln(DOTAM)(H(2)O)](3+) (DOTAM = 1,4,7,10- tetrakis[(carbamoyl)methyl]-1,4,7,10-tetraazacyclododecane), and related systems containing pyridyl units (Ln = Gd, Tb). Subsequent all-electron relativistic calculations based on the DKH2 approximation, or small-core ECP calculations, were used to compute the (1)H hyperfine coupling constants (HFCCs) at the ligand nuclei (A(iso) values). The calculated A(iso) values provided direct access to contact contributions to the (1)H NMR shifts of the corresponding Tb(III) complexes under the assumption that Gd and Tb complexes with a given ligand present similar HFCCs. These contact shifts were used to obtain the pseudocontact shifts, which encode structural information as they depend on the position of the nucleus with respect to the lanthanide ion. An excellent agreement was observed between the experimental and calculated pseudocontact shifts using the DFT-optimized geometries as structural models of the complexes in solution, which demonstrates that the computational approach used provides (i) good structural models for the complexes, (ii) accurate HFCCs at the ligand nuclei. The methodology presented in this work can be classified in the context of model-dependent methods, as it relies on the use of a specific molecular structure obtained from DFT calculations. Our results show that spin polarization effects dominate the (1)H A(iso) values. The X-ray crystal structures of [Ln(Me-DODPA)](PF(6))·2H(2)O (Ln = Eu or Lu) are also reported.

Influence of counterions on the structure of bis(oxazoline)copper(ii) complexes; an EPR and ENDOR investigation

X- and Q-band EPR and ENDOR spectroscopy was used to study the structure of a series of heteroleptic and homoleptic copper bis(oxazoline) complexes, based on the (-)-2,2'-isopropylidenebis[(4S)-4-phenyl-2-oxazoline] ligand and bearing different counterions (chloride versus triflate); labelled [Cu(II)(1a-c)]. The geometry of the two heteroleptic complexes, [Cu(II)(1a)] and [Cu(II)(1c)], depended on the choice of counterion. Formation of the homoleptic complex was only evident when the Cu(II)(OTf)(2) salt was used (Cu(II)(Cl)(2) inhibited the transformation from heteroleptic to homoleptic complexes). The hyperfine and quadrupole parameters for the surrounding ligand nuclei were determined by ENDOR. Well resolved (19)F and (1)H couplings confirmed the presence of both coordinated water and TfO(-) counterions in [Cu(1a)].

U235nuclear relaxation rates in an itinerant antiferromagnetUSb2

$^{235}$U nuclear spin-lattice ($T_1^{-1}$) and spin-spin ($T_2^{-1}$) relaxation rates in the itinerant antiferromagnet USb$_2$ are reported as a function of temperature in zero field. The heating effect from the intense rf pulses that are necessary for the $^{235}$U NMR results in unusual complex thermal recovery of the nuclear magnetization which does not allow measuring $T_1^{-1}$ directly. By implementing an indirect method, however, we successfully extracted $T_1^{-1}$ of the $^{235}$U. We find that the temperature dependence of $T_1^{-1}$ for both $^{235}$U and $^{121}$Sb follows the power law ($\propto T^n$) with the small exponent $n=0.3$ suggesting that the same relaxation mechanism dominates the on-site and the ligand nuclei, but an anomaly at 5 K was observed, possibly due to the change in the transferred hyperfine coupling on the Sb site.

Synthesis and redox properties of dinuclear rhodium(II) carboxylates with 2,6-di-tert-butylphenol moieties

Abstract By exploiting the peculiar reactivity of [Rh2(μ-O2CBut)4(H2O)2] (1) the examples of dinuclear rhodium(II) carboxylates containing N-donor axial ligands (2, 3) [Rh2(μ-O2CBut)4L2] [where L = benzonitrile (2), 3,5-di-tert-butyl-4-hydroxybenzonitrile (3)] were synthesized and characterized by elemental analysis, IR, multinuclear NMR spectroscopy, MALDI-TOF mass spectrometry. It was found by X-ray diffraction that pairs of 3 in crystals are associated through H atoms of phenol groups to produce a dimer of dimers. The chemical oxidation of dirhodium complexes with 2,6-di-tert-butyl-4-cyanоphenol pendants studied by means of ESR method in solutions leads to the formation of phenoxyl radicals 3′ in dirhodium system. The ESR data show the interaction of the unpaired electron with ligand nuclei (1H, 14N) and 103Rh. The stability of radical complexes with phenoxyl fragments in axial position is influenced by the temperature. The enthalpy of the 3′ decomposition followed by the formation of cyanophenoxyl radical as 20 ± 1 kJ/mol was estimated. Redox transformations in dirhodium system including both metal and axial ligands were investigated by electrochemistry. CV experiments confirm the assumption of the metal oxidation (RhII→RhIII) as the first step following by the oxidation of the ligand.

Pleomorphic Copper Coordination by Alzheimer’s Disease Amyloid-β Peptide

Numerous conflicting models have been proposed regarding the nature of the Cu(2+) coordination environment of the amyloid beta (Abeta) peptide, the causative agent of Alzheimer's disease. This study used multifrequency CW-EPR spectroscopy to directly resolve the superhyperfine interactions between Cu(2+) and the ligand nuclei of Abeta, thereby avoiding ambiguities associated with introducing point mutations. Using a library of Abeta16 analogues with site-specific (15)N-labeling at Asp1, His6, His13, and His14, numerical simulations of the superhyperfine resonances delineated two independent 3N1O Cu(2+) coordination modes, {N(a)(D1), O, N(epsilon)(H6), N(epsilon)(H13)} (component Ia) and {N(a)(D1), O, N(epsilon)(H6), N(epsilon)(H14)} (component Ib), between pH 6-7. A third coordination mode (component II) was identified at pH 8.0, and simulation of the superhyperfine resonances indicated a 3N1O coordination sphere involving nitrogen ligation by His6, His13, and His14. No differences were observed upon (17)O-labeling of the phenolic oxygen of Tyr10, confirming it is not a key oxygen ligand in the physiological pH range. Hyperfine sublevel correlation (HYSCORE) spectroscopy, in conjunction with site-specific (15)N-labeling, provided additional support for the common role of His6 in components Ia and Ib, and for the assignment of a {O, N(epsilon)(H6), N(epsilon)(H13), N(epsilon)(H14)} coordination sphere to component II. HYSCORE studies of a peptide analogue with selective (13)C-labeling of Asp1 revealed (13)C cross-peaks characteristic of equatorial coordination by the carboxylate oxygen of Asp1 in component Ia/b coordination. The direct resolution of Cu(2+) ligand interactions, together with the key finding that component I is composed of two distinct coordination modes, provides valuable insight into a range of conflicting ligand assignments and highlights the complexity of Cu(2+)/Abeta interactions.

A W-band pulsed EPR/ENDOR study of CoIIS4 coordination in the Co[(SPPh2)(SPiPr2)N]2 complex

Spin-echo detection at 95 GHz enables an electron-paramagnetic-resonance study of a cobalt complex with a bio-mimetic coordination of the transition metal by four sulfur atoms. A magnetically diluted single crystal of the complex has been investigated in great detail. Electron-nuclear double-resonance signals were observed of ligand nuclei and complete hyperfine tensors of the distinct phosphorus nuclei were derived, assigned and discussed.

Synthesis, Molecular Structure, and EPR Analysis of the Three-Coordinate Ni(I) Complex [Ni(PPh3)3][BF4

The compound [Ni(PPh(3))(3)][BF(4)] x BF(3) x OEt(2) was isolated in crystalline form from the olefin oligomerization catalyst system Ni(PPh(3))(4)/BF(3) x OEt(2) and structurally characterized by X-ray diffraction. The influence of vibronic coupling on the EPR parameters of three-coordinate metal complexes with a 3d(9) electronic configuration was investigated within the framework of ligand field theory. Analytical expressions for g-tensor components and isotropic hyperfine coupling constants with ligand nuclei were obtained using first-order perturbation theory. It has been shown that the account of the vibronic interaction in the excited state predicts the existence of three-axial anisotropy of the g-tensor even at the level of first-order perturbation theory; two axes of the g-tensor located in a plane of three-coordinate structure can rotate about the main z axis when a compound is distorted by motion of ligands. It has been shown that in three points of the potential energy surface minimum, for which linear and quadric constants of the vibronic interactions have an identical signs, the HFS isotropic constant from one ligand is larger than HFS constants from the other two; for different vibronic constant signs the ratio between HFS constants varies on opposite. This theoretical researches are in the quality consent with experimental data for a three-coordinate Ni(I) and Cu(II) flat complexes.