Leaf Size Research Articles

Mutations in CsWOX4 Regulate Leaf Vein Pattern and Leaf Size in Cucumber (Cucumis sativus L.)

The leaf morphology is an important agronomic trait in crop production. Our study identified a maple leaf type (mlt) cucumber mutant and located the regulatory gene for leaf shape changes through BSA results. Hybrid F1 and F2 populations were generated by F1 self-crossing, and the candidate mlt genes were identified within the 2.8 Mb region of chromosome 2 using map cloning. Through the sequencing and expression analysis of genes within the bulk segregant analysis (BSA) region, we identified the target gene for leaf shape regulation as CsWOX4 (CsaV3_2G026510). The change from base C to T in the original sequence led to frameshift mutations and the premature termination of translation, resulting in shortened encoded proteins and conserved WUSCHEL (WUS) box sequence loss. The specific expression analysis of the CsWOX4/Cswox4 genes in the roots, stems, leaves and other tissue types of wild-type (WT) and mutant plants revealed that CsWOX4 was higher in the root, but Cswox4 (mutant gene) was significantly higher in the leaf. Subcellular localization analysis revealed that CsWOX4 was localized in the nucleus. RNA-seq analysis revealed that the differentially expressed genes were mainly enriched in the mitochondrial cell cycle phase transition, nucleosome and microtubule binding pathways. Simultaneously, the quantitative analysis of the expression trends of 25 typical genes regulating the leaf types revealed the significant upregulation of CsPIN3. In our study, we found that the conserved domain of CsWOX4 was missing in the mutant, and the transcriptome data revealed that the expression of some genes, such as CsPIN3, changed simultaneously, thereby jointly regulating changes in the cucumber leaf type.

Arabidopsis GLYI4 Reveals Intriguing Insights into the JA Signaling Pathway and Plant Defense

Plant hormones play a central role in various physiological functions and mediate defense responses against (a)biotic stresses. Jasmonic acid (JA) has emerged as one of the key phytohormones involved in the response to necrotrophic pathogens. Under stressful conditions, plants can also produce small molecules, such as methylglyoxal (MG), a cytotoxic aldehyde. The enzymes glyoxalase I (GLYI) and glyoxalase II primarily detoxify MG. In Arabidopsis thaliana, GLYI4 has been recently characterized as having a crucial role in MG detoxification and emerging involvement in the JA pathway. Here, we investigated the impact of a GLYI4 loss-of-function on the Arabidopsis JA pathway and how MG affects it. The results showed that the glyI4 mutant plant had stunted growth, a smaller rosette diameter, reduced leaf size, and an altered pigment concentration. A gene expression analysis of the JA marker genes showed significant changes in the JA biosynthetic and signaling pathway genes in the glyI4 mutant. Disease resistance bioassays against the necrotroph Botrytis cinerea revealed altered patterns in the glyI4 mutant, likely due to increased oxidative stress. The MG effect has a further negative impact on plant performance. Collectively, these results contribute to clarifying the intricate interconnections between the GLYI4, MG, and JA pathways, opening up new avenues for further explorations of the intricate molecular mechanisms controlling plant stress responses.

Two novel alleles of the MYB transcription factor BjA06.GL1 and BjB02.GL1 control leaf trichomes and enhance resistance to aphids in Brassica juncea

Abstract Leaf trichome formation is a very important agronomic trait as it confers resistance to biotic and abiotic stresses, but the causal genes involved in this process in B. juncea remain largely unexplored. In this study, we first characterized the haplotypes of BjB02.GL1 among different inbred lines with leaf trichomes or glabrous leaves. A comparative analysis of the number and density of leaf trichomes between the two mustard inbred lines was then performed. BSA analysis of leaves with trichomes and glabrous pools from the F2 segregating population mapped the candidate genes on Chr.A06 and Chr.B02. Two candidate genes, BjA06.GL1 and BjB02.GL1, were subsequently cloned. After sequence alignment of the BjGL1 genes, both SNPs and indel were identified in the BjA06.GL1 and BjB02.GL1 genes. And qRT–PCR analysis further confirmed that both the BjA06.GL1 and BjB02.GL1 genes were more highly expressed in leaves with trichomes than in glabrous leaves. As the leaf size increased, the leaf trichome density decreased. Gene editing of both BjA06.GL1 and BjB02.GL1 changed the leaf trichome to a glabrous leaf phenotype in mustard. In addition, plants with leaf trichomes presented greater resistance to aphids. Taken together, our results revealed that both BjA06.GL1 and BjB02.GL1 positively regulate leaf trichome formation and help increase aphid resistance in mustard. This study provides valuable resources and helps to elucidate the molecular mechanism of leaf trichome formation in B. juncea.

Analyzes of pan-genome and resequencing atlas unveil the genetic basis of jujube domestication

Jujube (Ziziphus jujuba Mill.), belonging to the Rhamnaceae family, is gaining increasing prominence as a perennial fruit crop with significant economic and medicinal values. Here, we conduct de novo assembly of four reference-grade genomes, encompassing one wild and three cultivated jujube accessions. We present insights into the population structure, genetic diversity, and genomic variations within a diverse collection of 1059 jujube accessions. Analyzes of the jujube pan-genome, based on our four assemblies and four previously released genomes, reveal extensive genomic variations within domestication-associated regions, potentially leading to the discovery of a candidate gene that regulates flowering and fruit ripening. By leveraging the pan-genome and a large-scale resequencing population, we identify two candidate genes involved in domestication traits, including the seed-setting rate, the bearing-shoot length and the leaf size in jujube. These genomic resources will accelerate evolutionary and functional genomics studies of jujube.

Improved Protocol for Efficient Agrobacterium-Mediated Transient Gene Expression in Medicago sativa L.

Medicago sativa L. (Alfalfa) is a globally recognized forage legume that has recently gained attention for its high protein content, making it suitable for both human and animal consumption. However, due to its perennial nature and autotetraploid genetics, conventional plant breeding requires a longer timeframe compared to other crops. Therefore, genetic engineering offers a faster route for trait modification and improvement. Here, we describe a protocol for achieving efficient transient gene expression in alfalfa through genetic transformation with the Agrobacterium tumefaciens pCAMBIA1304 vector. This vector contains the reporter genes β-glucuronidase (GUS) and green fluorescent protein (GFP), along with a selectable hygromycin B phosphotransferase gene, all driven by the CaMV 35s promoter. Various transformation parameters—such as different explant types, leaf ages, leaf sizes, wounding types, bacterial concentrations (OD600nm), tissue preculture periods, infection periods, co-cultivation periods, and different concentrations of acetosyringone, silver nitrate, and calcium chloride—were optimized using 3-week-old in vitro-grown plantlets. Results were attained from data based on the semi-quantitative observation of the percentage and number of GUS spots on different days of agro-infection in alfalfa explants. The highest percentage of GUS positivity (76.2%) was observed in 3-week-old, scalpel-wounded, segmented alfalfa leaf explants after 3 days of agro-infection at a bacterial concentration of 0.6, with 2 days of preculture, 30 min of co-cultivation, and the addition of 150 µM acetosyringone, 4 mM calcium chloride, and 75 µM silver nitrate. The transient expression of genes of interest was confirmed via histochemical GUS and GFP assays. The results based on transient reporter gene expression suggest that various factors influence T-DNA delivery in the Agrobacterium-mediated transformation of alfalfa. The improved protocol can be used in stable transformation techniques for alfalfa.

Road corridors vegetation in the semi-arid region: functional trait diversity and dynamics

Road corridor vegetation plays a vital role in maintaining ecosystem stability and providing essential ecological services, particularly in semi-arid regions where environmental conditions are challenging. In this study, we investigated the functional traits of native and non-native plant species along the N5 highway corridor in the semi-arid region of Punjab, Pakistan. The methodology involved extensive field surveys and systematic sampling of herbaceous vegetation, followed by detailed measurements of functional traits diversity. We classified 38 plant species into native and non-native categories and analyzed their distribution, life forms, leaf spectra, and flowering phenology. Our results revealed distinct patterns in the functional traits of native and non-native species, with non-native species exhibiting larger plant heights, leaf sizes, and leaf surface areas compared to native species. Additionally, native species displayed greater root and stem biomass, indicative of adaptations to nutrient-poor soils and water-limited environments. The findings suggest that non-native species possess traits associated with rapid growth and resource acquisition, enabling them to outcompete native vegetation and establish dominance in roadside ecosystems. These results provide valuable insights for understanding the ecological implications of non-native species and designing effective management strategies to mitigate their impacts on native biodiversity and ecosystem resilience in semi-arid regions.

Influence of soil microplastic contamination on maize (Zea mays) development and microbial dynamics

BackgroundMicroplastics are contaminants in soil ecosystems that alter biophysical processes, affect plant growth, ecosystems and humans in the long run. This study was conducted to investigate the influence of soil microplastic contamination on the growth, development, and microbial dynamics of maize (Zea mays).Composite soil samples were collected from the farm from 0 to 10 cm depth. Physicochemical properties were assessed before maize seed sowing. Three soil weight categories were treated with 30 g, 20 g and 10 g microplastics. Soil physicochemical properties and heavy metal content in maize plants were analyzed. Morphological parameters, microbial counts, and microorganism identification were conducted. FTIR analysis was carried out in selected plant parts.ResultsThe study revealed a pH range of 5.00–6.70, electrical conductivity of 70–158 µS/cm, organic carbon and organic matter, total nitrogen, average phosphorus content, clay and silt content. The concentrations of heavy metals in plant parts were within WHO standard limits of 425.5 and 500 mg/kg for iron and manganese, but above the limits of 40, 60, and 350 mg/kg for copper, zinc and magnesium. The plant had various leaf sizes and heights, with chlorosis and necrotic activity ranging from 0.33 to 2.67, and a range of 1.33 to 6.33, respectively. Soil samples showed a total bacterial count (TBC) of 2.00 × 103 cfu/g to 7.60 × 104 cfu/g and a total fungal count (TFC) of 4.00 × 103 cfu/g to 2.20 × 104 cfu/g. Pseudomonas aeruginosa, Bacillus subtilis, Escherichia coli, Staphylococcus epidermidis, Proteus mirabilis and Bacillus cereus had percentage occurrences of 44.31, 21.17, 9.12, and 3.26%, respectively. Penicillium notatum was the most prevalent, while Fusarium spp. was the least prevalent. The FTIR analysis of maize seeds from soil samples A, B, and C revealed various organic compounds, with opium powder and streptomycin sulphate being the most abundant. The study revealed that pot B had the highest microplastic concentration at 1 WAS, while pot C had the lowest at 0.10 mg/kg, indicating a differential soil microplastic accumulation.ConclusionMicroplastics impact soil health, plant growth, and nutrient cycling, necessitating sustainable agriculture. Long-term research is needed to understand ecological and physiological impacts and explore remediation techniques.

The transcription factor TaFDL2-1A functions in auxin metabolism mediated by abscisic acid to regulate shoot growth in wheat.

Genetic strategies can be effective in improving wheat (Triticum aestivum L.) drought stress tolerance, but accumulating evidence suggests that overexpressing drought-resistance genes, especially genes related to the abscisic acid (ABA) signaling pathway, can retard plant growth. We previously characterized the positive roles of the wheat bZIP transcription factor TaFD-Like2-1A (TaFDL2-1A) in drought stress tolerance and ABA biosynthesis and response, whereas a dwarfing shoot exhibited under normal conditions. This study determined the underlying mechanisms that allow TaFDL2-1A to affect shoot growth. Overexpressing TaFDL2-1A decreased cell length, cell width, leaf size, shoot length, and biomass in wheat. The results of RNA-seq showed that multiple differently expressed transcripts are enriched in the auxin signaling pathway. Further analysis indicated higher expression levels of Gretchen Hagen3 (GH3) genes and lower indole-3-acetic acid (IAA) concentrations in the TaFDL2-1A overexpression lines. Exogenous IAA treatment restored the phenotypes of the TaFDL2-1A overexpression lines to wild-type levels. Transcriptional regulation analysis suggested that TaFDL2-1A enhances the expression of auxin metabolism genes, such as TaGH3.2-3A, TaGH3.2-3B, TaGH3.8-2A, and TaGH3.8-2D, by directly binding to ACGT core cis-elements. Furthermore, tafdl2 knock-out plants had lower expression levels of these GH3 genes and higher IAA levels than Fielder wheat. These GH3 gene expression and IAA levels were induced and reduced in Fielder wheat and tafdl2 knock-out plants treated with exogenous ABA. Our findings elucidate mechanisms underlying the functional redundancy of TaFDL2-1A in the crosstalk between ABA and IAA to affect shoot growth and provide insights into the balance between drought resistance and yield in wheat.

Influence of Soilless Growing Media Comprising Industrial By-products on Growth of Foliage Plants Epipremnum aureum and Dracaena sp.

Experiments were conducted during August, 2020 to April, 2021 at the ICAR-Directorate of Floricultural Research, Pune, Maharashtra, India to assess the suitability of industrial by-products fly ash and press mud as growing media component for foliage plants Epipremnum aureum and Dracaena sp. Different growing media compositions comprising of fly ash, press mud, cocopeat and vermicompost were evaluated in varying proportions. Foliage plants growth was monitored for nine months duration. Initial pH and electrical conductivity of growing media compositions were determined and leaf samples were analyzed for macro and micronutrients content at the end of the experiment. pH of growing media compositions ranged from near neutral to slightly alkaline pH and electrical conductivity of all media compositions was less than 1.0 dS m-1. Results indicated that growing media composition Fly ash+Vermicompost+Cocopeat (20:30:50) was the most suited growing media to grow Epipremnum aureum under 50% shade condition. Media compositions Cocopeat+Vermiculite+Perlite (33.3:33.3:33.3) and Fly ash+Vermicompost+Cocopeat (20:30:50) were observed to be more suited for growth of Dracaena sp. under 50% shade condition. Maximum plant height, number of leaves, leaf size and petiole length were recorded in Epipremnum aureum and Dracaena sp. plants grown in above media compositions respectively. Results inferred that fly ash along with vermicompost and cocopeat can be used as a growing media component for production of foliage plants Epipremnum aureum and Dracaena sp.

Some unique anatomical scaling relationships among genera in the grass subfamily Pooideae.

Members of the grass family Poaceae have adapted to a wide range of habitats and disturbance regimes globally. The cellular structure and arrangements of leaves can help explain how plants survive in different climates, but these traits are rarely measured in grasses. Most studies are focussed on individual species or distantly related species within Poaceae. While this focus can reveal broad adaptations, it is also likely to overlook subtle adaptations within more closely related groups (subfamilies, tribes). This study, therefore, investigated the scaling relationships between leaf size, vein length area (VLA) and vessel size in five genera within the subfamily Pooideae. The scaling exponent of the relationship between leaf area and VLA was -0.46 (±0.21), which is consistent with previous studies. In Poa and Elymus, however, minor vein number and leaf length were uncorrelated, whereas in Festuca these traits were positively correlated (slope = 0.82±0.8). These findings suggest there are broad-scale and fine-scale variations in leaf hydraulic traits among grasses. Future studies should consider both narrow and broad phylogenetic gradients.

Spider plant (Cleome gynandra) breeding priorities and preferences among landraces in Zimbabwe

Background: Participatory approaches such as participatory rural appraisal (PRA) and participatory variety selection (PVS) methods empower farmers to play a greater role in the decision-making process and in shaping the future improvement of crops. However, few studies have established breeding priorities and assessed variety preferences for spider plant, a nutrient-rich and medicinal crop mainly grown as landraces by farmers.Aim: This study aims to set spider plant breeding priorities and select preferred varieties.Setting: This study was conducted at seven farmer field schools (FFSs) located in various districts of Zimbabwe during the 2021–2022 summer season.Methods: Landrace genotypes were planted in a variety of demonstration plots where farmers met, learned and discussed important breeding traits, ultimately ranking the landrace genotypes. Important traits of spider plant were identified and prioritised to establish breeding priorities. The final ranking was conducted at the end of the season, and the data were analysed for significance.Results: The top six most important breeding priorities across the FFS can be ranked as follows: size of leaves number of branches taste late maturity germination early leaf growth. Preferences for different genotypes varied among FFSs. CGGUR, CGMRGP-Marondera and CGUZG1 were preferred for higher branching habits. Landraces with larger leaf sizes, were CGNPGRC356, CGMRGP-Marondera.Conclusion: The preferred genotypes were as follows: Tsholotsho = CGGUR, Rushinga = CGKENYA, Chiredzi = CGMRG1, Mudzi = CGMRGP-Marondera, Horticulture Research Institution – Research community (HRI-R) = CGMRG1 and CGKENYA, and M-Chiota = CGZIM and CGUZG1. Across FFSs, significantly (p 0.001) higher preference ranks were in the following order: CGMRGP-Marondera CGMRG1 CGNPGRC355 CGKENYA.Contribution: These genotypes can be utilised for future genetic improvement, seed production and variety release.

Tetranychus urticae Koch Biology on Apple Trees

The two-spotted spider mite (Tetranychus urticae Koch) is a polyphagous arthropod herbivore that consumes over 1,100 plant species from 140 distinct plant families, including those producing harmful chemicals in temperate and tropical climates. It is an important pest in greenhouse and field cultivation, causing damage to various crops such as citrus, apples, grapes, tomatoes, peppers, cucumbers, strawberries, maize, and soy. T. urticae ability to spread over agricultural fields and adapt to environmental stressors is linked to its high propensity for mutation, leading to the highest frequency of pesticide resistance among arthropods. The genetic diversity of T. urticae gathered from apple orchards throughout Poland has been studied to investigate potential correlations between molecular variations and the occurrence of resistance to METI-acaricides. Research has shown that an abundance of leaf pubescence on the abaxial leaf surface adversely affects the development of European red mite, two-spotted spider mite, and carmine spider mite. However, due to variations in leaf sizes, tree canopy, tree ages, and the existence of natural enemies, it is impossible to compare data gathered due to variations in leaf sizes, tree canopy, tree ages, and the presence of natural enemies. Pesticide treatments negatively impact fruit plantations' ecosystems, devastating biodiversity, altering the makeup and structure of arthropod populations, and promoting mass reproduction of phytophage mites by displacing certain species with others. The most extensive research has been done on the common spider mite's development of resistance to avermectin group preparations, with some studies showing resistance to multiple acaricides.

Vegetative traits, floral biology, and mutualistic interactions in the tropical mountain shrub Ribes ciliatum (Grossulariaceae)

Plant species in tropical mountain ecosystems experience significant environmental variation across short spatial distances. These systems offer an opportunity to assess geographic variation in plant traits in relation to biotic and abiotic environments. We examined plant vegetative and reproductive traits in the shrub R. ciliatum across two native conifer forests in central Mexico. We measured plant height, number of branches, leaf size, flower production, floral morphology, floral longevity, and plant reproductive success in R. ciliatum populations found in fir forests (3100 m) and Hartweg's pine forests (subalpine habitat, 3700 m). We also quantified the level of pollinator dependence, pollinator visitation rates, and fruit consumption rates by frugivorous birds in both populations. Plants were shorter and had smaller leaves in the subalpine forest than in the fir forest. Floral longevity decreased in the subalpine forest, but flower production, flower size, and fruit weight remained similar across populations. Fruit set and pollinator visitation rates were higher in the subalpine forest; however, seed weight and fruit consumption rates did not differ between sites. Hummingbirds and bumblebees were the primary pollinators of R. ciliatum, and the bird Ptiliogonys cinereus was the most important fruit consumer at both sites. Fruit set was entirely dependent on pollinators. Reduced plant size in the subalpine forest coincides with a general pattern associated with high mountain environments. In contrast, reproductive characters had a closer relationship to the pollination environment. The absence of variation in flower size and shape was consistent with the similarity in the composition of the pollinator community. Meanwhile, compared to lower-elevation forests, the subalpine forest exhibited shorter-lived flowers and increased fruit set, associated with higher pollinator visitation rates. Ribes ciliatum is a key resource for pollinators and frugivores at a time of year when few other floral resources are available in these high-elevation mountain forests.

Morphological variability of rosette leaves within Sempervivum ciliosum and S. ruthenicum complexes (Crassulaceae): The geometric morphometrics approach

The yellow-flowered Sempervivum species from the Balkan Peninsula, tentatively divided into Sempervivum ciliosum (S. ciliosum, S. galicicum, S. jakucsii, S. klepa, S. octopodes) and S. ruthenicum complexes (S. kindingeri, S. leucanthum, S. ruthenicum, S. zeleborii), are well known for their pronounced phenotypic plasticity, especially in the vegetative parts, resulting in exceedingly complicate infrageneric taxonomy. Extensive studies dealing with the variability of qualitative and quantitative traits, such as the shape and size of the rosette leaves, were not conducted in the past. This study aimed to analyse the extent of morphological variability of the rosette leaves regarding their shape and size and evaluate their potential to resolve taxonomic doubts. For this purpose, geometric morphometrics, as a tool for analysing minute shape variability, was used to discriminate mentioned species. The variability of the rosette leaves was statistically analysed within 15 populations using univariate (ANOVA) and multivariate statistical analysis (MANOVA, PCA, DA). Obtained results indicated highly statistically significant differences in rosette leaf shape and size between analysed complexes and species.

Non-additive expression genes play a critical role in leaf vein ratio heterosis in Nicotiana tabacum L.

Heterosis, recognized for improving crop performance, especially in the first filial (F1) generation, remains an area of significant study in the tobacco industry. The low utilization of leaf veins in tobacco contributes to economic inefficiency and resource waste. Despite the positive impacts of heterosis on crop genetics, investigations into leaf-vein ratio heterosis in tobacco have been lacking. Understanding the mechanisms underlying negative heterosis in leaf vein ratio at the molecular level is crucial for advancing low vein ratio leaf breeding research. This study involved 12 hybrid combinations and their parental lines to explore heterosis associated with leaf vein ratios. The hybrids displayed diverse patterns of positive or negative leaf vein ratio heterosis across different developmental stages. Notably, the F1 hybrid (G70 × Qinggeng) consistently exhibited substantial negative heterosis, reaching a maximum of -19.79% 80 days after transplanting. A comparative transcriptome analysis revealed that a significant proportion of differentially expressed genes (DEGs), approximately 39.04% and 23.73%, exhibited dominant and over-dominant expression patterns, respectively. These findings highlight the critical role of non-additive gene expression, particularly the dominance pattern, in governing leaf vein ratio heterosis. The non-additive genes, largely associated with various GO terms such as response to abiotic stimuli, galactose metabolic process, plant-type cell wall organization, auxin-activated signaling pathway, hydrolase activity, and UDP-glycosyltransferase activity, were identified. Furthermore, KEGG enrichment analysis unveiled their involvement in phenylpropanoid biosynthesis, galactose metabolism, plant hormone signal transduction, glutathione metabolism, MAPK signaling pathway, starch, and sucrose metabolism. Among the non-additive genes, we identified some genes related to leaf development, leaf size, leaf senescence, and cell wall extensibility that showed significantly lower expression in F1 than in its parents. These results indicate that the non-additive expression of genes plays a key role in the heterosis of the leaf vein ratio in tobacco. This study marks the first exploration into the molecular mechanisms governing leaf vein ratio heterosis at the transcriptome level. These findings significantly contribute to understanding leaf vein ratios in tobacco breeding strategies.

Effect of Different Concentrations of Tomato Leaf Extract on Aphid Control in Rape Production in Zimbabwe

Rape (Brassica napus) is an important vegetable crop grown by smallholder farmers in Zimbabwe to achieve food and nutritional security. However, productivity and quality of rape are greatly dampened by aphids which reduce its palatability and quality. Chemical pesticides, while effective, pose environmental risks and can lead to pest resistance and resurgence, besides residual effects and bioaccumulation along the food chain. Tomato leaves are rich in phenolic and flavonoid compounds, that have shown promise as a botanical pesticide against aphids in other crops. This research aimed to establish the aphicidal components in tomato leaf extract using TLC and UV-Vis Spectroscopy; establish toxicity of the extract using laboratory bioassay, investigate the potential of different concentrations of tomato leaf extracts as a natural, environmentally friendly and sustainable approach to pest management against aphids in rape production at Kushinga Phikelela Agricultural College in Zimbabwe. A CRD with four treatments (0%, 20%, 40% and 60% of tomato leaf extract) and distilled water (negative control) replicated five times each was used. Aphid infestation (scored on a scale of 0-9), yield, leaf size, and plant height were measured fortnightly. Data was analysed for statistical significance using ANOVA while separation of significant means was done by Fisher’s Protected Least Significant Difference Test (LSD (5%). The results from combined analysis using TLC and UV- Vis Spectroscopy indicated that tomato leaf extract used in this research contained compounds (Solanine, Tomatine, Chaconine) which are known to be toxic to pests. There was a highly significant (p<0.001) difference among treatments on aphid mortality. The highest aphid mortality (95.57%) while the lowest (4%) was observed in 60% and 0% leaf extract respectively. Aphid infestation, leaf size and plant height were highly significant (P<0.001) during weeks 4, 6, 8 and 10 after transplanting. Aphid infestation in week 10 mean score was 8.8, 6.2, 3.8 and 0.8 for 0%, 20%, 40% and 60% tomato leaf extract respectively. Other parameters such as yield and leaf size were highest in the plots that received 60% tomato leaf extract sprays. Highly significant difference (P<0.001) in yield was observed in weeks 8 and 10, while significant difference (P<0.05) in yield was noted in weeks 4 and 6. However, in week two there were no significant differences among the treatments in yield and aphid infestation. Tomato leaf extracts contain secondary metabolites toxic to aphids and this can be used by resource constrained farmers. We recommend the use 60% tomato leaf extracts to control aphids in rape to sustainably achieve high yields.

A vacuolar invertase gene SlVI modulates sugar metabolism and postharvest fruit quality and stress resistance in tomato

Abstract Sugars act as signaling molecules to modulate various growth processes and enhance plant tolerance to various abiotic and biotic stresses. Moreover, sugars contribute to the post-harvest flavor in fleshy fruit crops. To date, the regulation of sugar metabolism and its effect in plant growth, fruit ripening, postharvest quality and stress resistance remains not fully understood. In this study, we investigated the role of tomato gene encoding a vacuolar invertase, hydrolyzing sucrose to glucose and fructose. SlVI is specifically expressed during the tomato fruit ripening process. We found that overexpression of SlVI resulted in increased leaf size and early flowering, while knockout of SlVI led to increased fruit sucrose content, enhanced fruit firmness, and elevated resistance of postharvest fruit to Botrytis cinerea. Moreover, the content of naringenin and total soluble solids was significantly increased in SlVI knockout fruit at postharvest stage. Transcriptome analysis showed a negative feedback regulation triggered by sucrose accumulation in SlVI knockout fruit resulting in a downregulation of BAM3 and AMY2, which are critical for starch degradation. Moreover, genes associated with cell wall, cutin, wax, and flavonoid biosynthesis and pathogen resistance were upregulated in SlVI knockout fruit. Conversely, the expression levels of genes involved in cell wall degradation were decreased in knockout fruit. These results are consistent with the enhanced postharvest quality and resistance. Our findings not only provide new insights into the relationship between tomato fruit sucrose content and postharvest fruit quality, but also suggest new strategies to enhance fruit quality and extend postharvest shelf life.

Genetic diversity and population structure of superior shea trees (Vitellaria paradoxa subsp. paradoxa) using SNP markers for the establishment of a core collection in Côte d'Ivoire.

The shea tree is a well-known carbon sink in Africa that requires a sustainable conservation of its gene pool. However, the genetic structure of its population is not well studied, especially in Côte d'Ivoire. In this study, 333 superior shea tree genotypes conserved in situ in Côte d'Ivoire were collected and genotyped with the aim of investigating its genetic diversity and population structure to facilitate suitable conservation and support future breeding efforts to adapt to climate change effects. A total of 7,559 filtered high-quality single nucleotide polymorphisms (SNPs) were identified using the genotyping by sequencing technology. The gene diversity (HE) ranged between 0.1 to 0.5 with an average of 0.26, while the polymorphism information content (PIC) value ranged between 0.1 to 0.5 with an average of 0.24, indicating a moderate genetic diversity among the studied genotypes. The population structure model classified the 333 genotypes into three genetic groups (GP1, GP2, and GP3). GP1 contained shea trees that mainly originated from the Poro, Tchologo, and Hambol districts, while GP2 and GP3 contained shea trees collected from the Bagoué district. Analysis of molecular variance (AMOVA) identified 55% variance within populations and 45% variance within individuals, indicating a very low genetic differentiation (or very high gene exchange) between these three groups (FST = 0.004, gene flow Nm = 59.02). Morphologically, GP1 displayed spreading tree growth habit, oval nut shape, higher mean nut weight (10.62g), wide leaf (limb width = 4.63cm), and small trunk size (trunk circumference = 133.4cm). Meanwhile, GP2 and GP3 showed similar morphological characteristics: erect and spreading tree growth habit, ovoid nut shape, lower mean nut weight (GP2: 8.89g; GP3: 8.36g), thin leaf (limb width = 4.45cm), and large trunk size ( GP2: 160.5cm, GP3: 149.1cm). A core set of 100 superior shea trees, representing 30% of the original population size and including individuals from all four study districts, was proposed using the "maximum length sub-tree function" in DARwin v. 6.0.21. These findings provide new knowledge of the genetic diversity and population structure of Ivorian shea tree genetic resources for the design of effective collection and conservation strategies for the efficient use of inbreeding.

The third dimension of alpine plant leaf traits is related to cold-tolerance

Alpine plants possess unique traits to adapt alpine environments. Whether leaf trait relationships of alpine plants can be captured by the two trait dimensions of organ size and resource economics is unknown. We hypothesized that, beyond the trait dimensions of leaf size and resource economics, non-structured carbohydrates (NSC) would reflect a dimension of cold-tolerance in alpine plants. To test this hypothesis, we measured 12 leaf traits critical to leaf construction and growth in 143 species across 7 sites ranging from alpine steppes to alpine meadows along an environmental gradient on the Tibetan Plateau. Furthermore, a cold resistance experiment was conducted at one of these sites to estimate the lethal temperature causing 50% frost damage (LT50) of 11 alpine species. The majority of variations in 12 leaf traits of alpine plants were captured by three trait axes, in which leaf carbon (LCC) and NSC (including starch, LSC and soluble sugars, LSS) were clustered in a new dimension (PC3) beyond leaf size and structure, and resource economics. Although LCC, LSC and LSS all showed negative correlations with MAT, a significant negative correlation was only found between LSS and LT50. It indicated that PC3 was able to reflect the cold-tolerance of alpine plants to some extent, in which LSS was the most critical trait. The storage and transformation of NSC under stressful conditions could reflect a dimension of long-term metabolic adaptation and cold-tolerance, which is an extension of the resource-utilization strategy beyond construction cost and growth.

Associations Between Developmental Stability, Canalization, and Phenotypic Plasticity in Response to Heterogeneous Experience.

The processes of developmental stability, canalization, and phenotypic plasticity have ecological and evolutionary significance, and been studied extensively, but mostly separately and thus the relationships between them are not straightforward. Our objective was to better integrate these processes in the context of temporally heterogeneous environments. We did this by investigating the effects of early experience with temporal heterogeneity in water availability on associations between developmental stability, canalization, and phenotypic plasticity. We subjected eight plant species to a first round of alternating inundation and drought vs. constantly moderate water treatments (heterogeneous experience) and a second round of water conditions (to test plasticity). We measured fluctuating asymmetry (FA) in leaf size, intra- and inter-individual variation (CVintra and CVinter), and plasticity (PI) in traits and analyzed correlations between these variables across all species. Results showed little correlations between FA, CVintra and PI, several positive correlations between FA and CVinter in more stressful conditions, especially in as well as positive correlations between CVinter and PI initially and negative correlations between them later. These suggested the complexity of these relationships, which can depend on whether plasticity occurs. Greater inter-individual variation will more likely cooperate with plasticity before or during plastic response, whereas higher canalization may reflect phenotypic convergence. Both higher FA and CVintra can reflect faster growth, while CVintra may also reflect plant growth stage, and the two mechanisms should cooperate in response to environmental challenges. The complexity of these relationships suggests plants deal with environmental variation in elaborate and integrative ways which can be affected by many factors.