Branched alkanes make up a significant fraction of sustainable alternative fuels. The accurate chemical kinetic modeling of the pyrolysis and oxidation of those fuels requires the availability of accurate kinetic data for branched structures. The accurate theoretical calculation of these data for substituted cyclic transition states (TS) is a challenge because of the large number of configurations that can be created, especially in the larger TS cycles. These configurations originate from all the possible combinations of the orientations of the substituents (axial or equatorial) on the cyclic TS and diastereomers in the reactants, which makes the rigorous counting of the multiple parallel pathways complicated. In this paper, the isomerisation reactions of branched alkyl radicals are theoretically investigated using the code presented in the Part I of this paper series. The 1,2 to 1,5-H-shift reactions are studied within the tabulated transition state models approach, where chain substituents are represented by methyl groups, and all combinations of substitutions in the model TSs are included in a table with their computed rate constants. The rate constants computed for hundreds of reactions with our code demonstrate the necessity to consider all the TS configurations in order to get accurate data. The presence of spectator substituents in the cyclic transition state is shown to have a major impact on the rate constants, increasing their values by more than a factor of 10 for some cases. The tabulated TS models (TMTS) method is validated by comparisons with available experimental data in the literature and is one of the only approach able to accurately capture the impact of branching on the rate constants of isomerizations for large alkyl radicals, which are still difficult to calculate with high-level on-the-fly ab initio calculations.
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