Asphaltene deposition may pose serious challenges to flow assurance of crude oil in well columns. Different aggregation kinetics would partly be responsible for asphaltene particle growth ending in deposition on the surface of well columns. This work primarily investigates the thermophoretic deposition velocity caused by temperature gradients inside well columns for various asphaltene aggregation kinetics, including crossover behaviour, sedimentation, reaction-limited aggregation (RLA), and diffusion-limited aggregation (DLA). To do so, the experimental observations of size distribution for a live crude oil was performed at 80°C and pressure range of 4500-5500 psia. Moreover, various patterns of different size distributions were gathered from the literature for the sake of comparison. Next, a well column in southern Iran was selected to study the kinetic behaviour of thermophoretic velocity of deposition, with a difference between geothermal and static temperatures of around 5 to 50°C. The non-isothermal deposition velocity was shown to decrease from the top to the bottom of the well column, according to the findings of the study. The results also revealed that the thermophoretic velocity decreases as particle size increases and vice versa. This was confirmed by examining a comparably large range of asphaltene particle sizes, ranging from approximately 100 nm to roughly 9 µm. Practical implications of these findings were also discussed which would provide guidance for mitigation of asphaltene deposition in well columns.