Wetland is a suitable habitat for water birds, and it enhances cultural ecosystem services. But the rapid transformation of such habitat, especially in floodplain environments, is an emerging crisis. Wetland reclamation and fragmentation are two major issues leading to poor habitat and landscape. The present paper aimed to explore the spatio-temporal changes in the suitability of wetland bird habitat, wetland landscape pattern, and the connection between them. Two wetlands, including a wetland of national importance, were taken as cases for this study. Time series Landsat and Sentinel images were taken for developing modeling parameters and Land Use Land Cover (LULC) for the years 2016 and 2020. The first transformation of wetland was accounted from the LULC maps of both years. Machine learning algorithm-based spatial models were developed for mapping the poor landscape condition of the existing wetland parts. Finally, semi-subjective analytic hierarchy approach (AHP)-based models were developed for assessing waterbird habitat suitability. Results demarcated more than 48% area belonging primarily to edges and tiny patches of wetlands under a poor state in 2020. Although the total wetland area was reduced between 2016 and 2020, the wetland area found to be highly suitable habitat increased from 25.5 to 59.44% of the total area during that period. The suitability of edge-preferring bird habitat showed a 10% increase. The increasing poverty of the landscape was caused by declining edge-preferring bird habitat suitability. From 1990 to 2020, 27% of wetlands were converted to single-cropped lands, and 5% were converted to multi-cropped agricultural land. Since the study spatially identified the potential suitable area and trend of wetland habitat transformation, this could help policymakers define suitable planning for the restoration and conservation of such promising bird habitat.