Salivary oligomeric α-synuclein (α-Syn) has been introduced as a promising biomarker for the diagnosis of Parkinson's disease. Herein, a fluorescence sensor array based on three carbon quantum dots (CQDs) with different surface functional groups was developed for the identification and quantification of salivary α-Syn oligomers. Each of the CQDs generated a different fluorescence response to the target analyte, and the responses were analyzed by NPLS-DA to create a unique response pattern for the target analyte. The developed three-element sensor array showed a linear response to α-Syn oligomers in the range of 0.5-32 μg/mL and a detection limit (LOD) of 0.5 μg/mL, with a cross-validation accuracy of 92% in aqueous solution. The sensor array could detect the analyte in a mixture of different proteins and in the complex medium of saliva, with the LOD of 0.3 μg/mL indicating the massive potential of CQD arrays for developing sensitive, simple, inexpensive, and label-free sensing platforms.