Molten metal (MM)-based methane (CH4) pyrolysis is a promising technology for clean hydrogen production with a minimal carbon footprint. Electromagnetic levitation (EMLR) and screening reactors (SR) were used to investigate the intrinsic catalytic reaction kinetics of MM-based CH4 pyrolysis. Heterogeneous catalytic reactions in the SR and EMLR occurred on the surfaces of the MM crucible and droplet, respectively. However, a homogenous non-catalytic reaction may occur just above the surface because the CH4 gas is preheated by the high-temperature MM. This study presents three-dimensional (3D) computational fluid dynamics (CFD) model coupled with chemical reactions to assess the extent to which non-catalytic reactions intervene in CH4 pyrolysis in both the SR and EMLR, which is difficult to measure experimentally. The CFD model validated against experimental data revealed that the non-catalytic reaction accounted for 4.0 % of CH4 pyrolysis in the CH4-Ni0.27Bi0.73 SR at 1045 °C, whereas it represented 0.02 % in the CH4-Sn EMLR at 1021 °C. This result highlights that the EMLR is suitable for studying the intrinsic catalytic reaction kinetics of MM-based CH4 pyrolysis because the non-catalytic reaction occurs to a lesser extent.