Juvenile Coho Research Articles

Effects of dietary Bacillus pumilus on the growth, intestinal health, lipid metabolism, and mTOR signaling pathway of juvenile coho salmon (Oncorhynchus kisutch)

Effects of dietary Bacillus pumilus on the growth, intestinal health, lipid metabolism, and mTOR signaling pathway of juvenile coho salmon (Oncorhynchus kisutch)

Juvenile coho salmon growth differences track biennial pink salmon spawning patterns

Abstract Spawning Pacific salmon (Oncorhynchus spp.) provide marine‐derived resources (MDR) to freshwater food webs in the form of eggs, flesh and maggots that consume salmon carcasses, all of which positively impact stream‐dwelling fish growth. Pink salmon (O. gorbuscha) are widely distributed throughout coastal catchments along the North Pacific Ocean and display increased spawning abundances in odd years, owing to a fixed 2‐year life history. While many studies have found that foraging and growth of stream‐dwelling salmonids are improved by increased adult salmon spawning abundance, few studies have investigated the importance of alternating pink salmon spawning abundance between years. Here, we examined how patterns of pink salmon spawning abundance impact the foraging and growth of juvenile coho salmon (O. kisutch). First, we used bioenergetic simulations to generate a hypothesis that coho salmon growth would increase during odd relative to even years. We then collected empirical juvenile coho salmon diet and growth data from a Southeast Alaska catchment in 2021 (pink salmon spawning) and 2022 (no pink salmon spawning). Field data were compared against simulation predictions to understand impacts of biennial pink salmon spawning patterns on juvenile coho salmon growth. Empirical growth data revealed similar patterns to bioenergetic simulations. Age‐1 coho salmon grew 16.6 mm longer and 5.5 g heavier on average in 2021 compared to 2022. Age‐0 coho salmon displayed minor growth differences between years. These results support bioenergetic model predictions and suggest that patterns of pink salmon spawning abundance can impart interannual growth disparities to juvenile coho salmon. Moreover, we show that distinct spawning characteristics of Pacific salmon species are important when understanding patterns of MDR transfer and growth responses in stream fishes.

Quantifying uncertainty when extrapolating the relationship between snorkel counts and mark-recapture estimates of juvenile salmonids

Snorkel surveys are frequently used to monitor stream-dwelling fish. Inferring local abundance from snorkel surveys is complicated by two primary factors: variable fish detection probabilities and the relative abundance of fish in habitat types below the recommended minimum depth for snorkeling. We examine these factors across three salmonid species ( Oncorhynchus spp .), 4 years, and 113 location-years in Oregon coastal streams. We calibrate snorkel counts to mark-recapture estimates and develop mathematically explicit expressions that convert a new snorkel count into a probability density of abundance for streams containing mixed habitat types that were and were not snorkeled. Snorkelers detected 63%, 47%, and 39% of juvenile coho salmon ( Oncorhynchus kitsutch), steelhead trout ( Oncorhynchus mykiss), and cutthroat trout ( Oncorhynchus clarkii clarkia) estimated by mark-recapture, respectively, but uncertainty within and among sampling units was high. Further, analytics developed here can be used to infer abundance and uncertainty for habitat types that were not snorkeled. Our quantification of uncertainty arising from using snorkel counts as a proxy for abundance will help managers balance biological risks with available resources.

Restored off‐channel pond habitats create thermal regime diversity and refuges within a Mediterranean‐climate watershed

Cool‐water habitats provide increasingly vital refuges for cold‐water fish living on the margins of their historical ranges; consequently, efforts to enhance or create cool‐water habitat are becoming a major focus of river restoration practices. However, the effectiveness of restoration projects for providing thermal refuge and creating diverse temperature regimes at the watershed scale remains unclear. In the Klamath River in northern California, the Karuk Tribe Fisheries Program, the Mid‐Klamath Watershed Council, and the U.S. Forest Service constructed a series of off‐channel ponds that recreate floodplain habitat and support juvenile coho salmon (Oncorhynchus kisutch) and steelhead (O. mykiss) along the Klamath River and its tributaries. We instrumented these ponds and applied multivariate autoregressive time series models of fine‐scale temperature data from ponds, tributaries, and the mainstem Klamath River to assess how off‐channel ponds contributed to thermal regime diversity and thermal refuge habitat in the Klamath riverscape. Our analysis demonstrated that ponds provide diverse thermal habitats that are significantly cooler than creek or mainstem river habitats, even during severe drought. Wavelet analysis of long‐term (10 years) temperature data indicated that thermal buffering (i.e. dampening of diel variation) increased over time but was disrupted by drought conditions in 2021. Our analysis demonstrates that in certain situations, human‐made off‐channel ponds can increase thermal diversity in modified riverscapes even during drought conditions, potentially benefiting floodplain‐dependent cold‐water species. Restoration actions that create and maintain thermal regime diversity and thermal refuges will become an essential tool to conserve biodiversity in climate‐sensitive watersheds.

State‐dependent estuary stopover boosts juvenile salmon growth: Implications for marine survival

AbstractStopover habitats allow migratory animals to bolster energy stores prior to the resumption of migration, which can increase an individual's likelihood of survival. Carryover effects from prior habitats may mediate stopover behavior: evidence suggests that low‐condition migrants exhibit longer stopovers and attain more growth during stopover than high‐condition individuals. For Pacific salmon (Oncorhynchus spp.), estuaries may be important stopover habitats during juvenile emigration from natal freshwaters to the ocean. Favorable foraging conditions in high‐productivity estuaries could boost growth, and body size at marine entry is generally positively correlated with survival to adulthood. However, the contribution of the estuarine life stage to individual fitness across the salmon life cycle remains poorly understood. Here, we show that body size at freshwater exit mediates estuary stopover behavior by juvenile coho salmon (O. kisutch) and that estuary growth can increase the probability of marine survival. We performed a multiyear mark–recapture study of juvenile coho salmon in the Koeye River and its estuary, located on the Central Coast of British Columbia. We found that stopover duration decreased with increasing body size: small juveniles spent more than three times longer in the estuary than their larger conspecifics. Mean annual estuary growth rates ranged from 0.58 to 0.95 mm/day, and the smallest juveniles grew by nearly 30% in fork length during estuary stopover. Consequently, each out‐migrating juvenile cohort entered the ocean larger and less variable in body size than it was at freshwater exit. Analysis of returning spawners from two juvenile cohorts (2017, 2018) indicated that larger individuals had higher ocean survival rates. Using a simplistic analytical extrapolation, we demonstrate that estuary stopover could increase marine survival: For median‐sized juveniles, growth achieved in the estuary was associated with 39.8% (34.0%–46.2%) higher survival for the 2017 cohort and 39.1% (31.6%–47.0%) higher survival for the 2018 cohort. These results, from a watershed unaltered by intensive logging or development, suggest that growth achieved during estuary stopover can mitigate freshwater carryover effects and buffer size‐selective survival in a changing ocean. More broadly, these findings highlight the importance of state‐dependent use of stopover habitats in the study of migration ecology and conservation of migratory species.

The Effects of Dietary Fermented Soybean Meal Supplementation on the Growth, Antioxidation, Immunity, and mTOR Signaling Pathway of Juvenile Coho Salmon (Oncorhynchus kisutch)

This experiment aims to investigate the effects of partial replacement of fish meal (FM) by soybean meal (SBM) and/or fermented soybean meal (FSBM) on the growth, serum biochemistry, digestion, antioxidation, immunity, and mTOR signaling pathway of juvenile coho salmon (Oncorhynchus kisutch). Four iso-nitrogen and iso-lipid diets were designed and fed to four groups of juvenile coho salmon (152.25 ± 2.96 g) in triplicate for 10 weeks. The four diets were the G0 diet (control group, containing 28% FM protein), the G1 diet (containing 10% SBM protein and 18% FM protein), the G2 diet (containing 5% SBM protein, 5% FSBM protein, and 18% FM protein), and the G3 diet (containing 10% FSBM protein and 18% FM protein). It was found that compared with the G0 diet (control group), the activities of catalase (CAT), superoxide dismutase (SOD), pepsin, trypsin, α-amylase, and lipase, and the expression levels of mammalian target of rapamycin (mtor), protein kinase B (akt), phosphatidylinositol 3-kinase (pi3k), plant ribosome S6K protein kinase (s6ks), and lysozyme (lyz) genes, of juvenile coho salmon fed the G3 diet increased significantly (p < 0.05), and the expression levels of tumor necrosis factor (tnf-α), interleukin-1β (il-1β), and interleukin-6 (il-6) genes of juvenile coho salmon fed the G3 diet decreased significantly (p < 0.05). However, there were no significant differences in growth, muscle composition, and serum biochemistry of juvenile coho salmon fed the G3 diet compared with the G0 diet (p > 0.05). In conclusion, replacing 10% FM protein with FSBM protein could improve the digestion, antioxidation, immunity, and mTOR signaling pathway of juvenile coho salmon.

Evaluation of Fermented Soybean Meal to Replace a Portion Fish Meal on Growth Performance, Antioxidant Capacity, Immunity, and mTOR Signaling Pathway of Coho Salmon (Oncorhynchus kisutch).

In this study, we evaluated the effects of fermented soybean meal (FSBM) or/and unfermented SBM replacing a portion of fish meal (FM) on the growth performance, antioxidant capacity, immunity, and mechanistic target of rapamycin (mTOR) signaling pathway of juvenile coho salmon (Oncorhynchus kisutch). Four groups of juvenile coho salmon (initial weight 152.23 ± 3.21 g) in triplicate were fed for 12 weeks on four different iso-nitrogen and iso-lipid experimental diets: G0 diet (28% FM protein, control group), G1 diet (18% FM protein and 10% SBM protein), G2 diet (18% FM protein, 5% SBM protein, and 5% FSBM protein), and G3 diet (18% FM protein and 10% FSBM protein). The main results were compared with the G0 diet; the weight gain rate, specific growth rate, and condition factor of juveniles in G3 were increased significantly (p < 0.05). The content of muscle crude protein, the total protein, glucose, albumin, total cholesterol in serum, and the total antioxidant capacity in the liver of juveniles in G3 was increased significantly (p < 0.05). The activities of pepsin, trypsin, α-amylase, and lipase in the intestine, the superoxide dismutase, catalase, and alkaline phosphatase in the liver of juveniles in G3 were increased significantly (p < 0.05). The expression levels of phosphatidylinositide 3-kinases, serine/threonine kinase, mTOR, and ribosomal protein S6 kinase 1 genes in the liver of juveniles in G3 were upregulated significantly (p < 0.05). The feed coefficient ratio, viscerosomatic index, the contents of muscle moisture, and malondialdehyde in the liver of juveniles in G3 were decreased significantly (p < 0.05). The expression levels of tumor necrosis factor α, interleukin 1β, and interleukin 6 genes in the liver of juveniles in G3 were downregulated significantly (p < 0.05). However, there was no significant effect (p > 0.05) on the survival rate, food intake, and muscle crude lipid and ash of juveniles among the experimental groups. In conclusion, FSBM to replace a portion FM had a positive effect on the growth performance, protein deposition, antioxidant enzyme activity, digestive enzyme activity, protein synthesis, and immune-related genes of juvenile coho salmon.

Tire-Derived Transformation Product 6PPD-Quinone Induces Mortality and Transcriptionally Disrupts Vascular Permeability Pathways in Developing Coho Salmon.

Urban stormwater runoff frequently contains the car tire transformation product 6PPD-quinone, which is highly toxic to juvenile and adult coho salmon (Onchorychus kisutch). However, it is currently unclear if embryonic stages are impacted. We addressed this by exposing developing coho salmon embryos starting at the eyed stage to three concentrations of 6PPD-quinone twice weekly until hatch. Impacts on survival and growth were assessed. Further, whole-transcriptome sequencing was performed on recently hatched alevin to address the potential mechanism of 6PPD-quinone-induced toxicity. Acute mortality was not elicited in developing coho salmon embryos at environmentally measured concentrations lethal to juveniles and adults, however, growth was inhibited. Immediately after hatching, coho salmon were sensitive to 6PPD-quinone mortality, implicating a large window of juvenile vulnerability prior to smoltification. Molecularly, 6PPD-quinone induced dose-dependent effects that implicated broad dysregulation of genomic pathways governing cell-cell contacts and endothelial permeability. These pathways are consistent with previous observations of macromolecule accumulation in the brains of coho salmon exposed to 6PPD-quinone, implicating blood-brain barrier disruption as a potential pathway for toxicity. Overall, our data suggests that developing coho salmon exposed to 6PPD-quinone are at risk for adverse health events upon hatching while indicating potential mechanism(s) of action for this highly toxic chemical.

Title: detection of juvenile coho salmon (Oncorhynchus kisutch) indicates widespread successful reproduction and different life-history strategies in the extreme south of Patagonia

Title: detection of juvenile coho salmon (Oncorhynchus kisutch) indicates widespread successful reproduction and different life-history strategies in the extreme south of Patagonia

Effect of replacing a portion of fish meal with unfermented and/or fermented soybean meal on the growth performance, antioxidant and immunity capacity and related gene expression in juvenile Coho Salmon, Oncorhynchus kisutch

AbstractThis study investigated the effect of replacing a portion of fish meal with unfermented and/or fermented soybean meal in juvenile coho salmon (Oncorhynchus kisutch). Four groups of juveniles (initial weight 110.31 ± 3.12 g) in triplicate were fed for 90 days on four different iso‐nitrogen and iso‐lipid diets. The G0 diet comprised 28% fish meal protein (control group). In the other three diets (G1, G2, and G3), 10% of the fish meal protein was replaced with unfermented and/or fermented soybean meal protein. The main results were: Compared with G0, the WGR, SGR, CF; the contents of GLU, TP, ALB, T‐CHO, and T‐AOC, the activities of AKP, CAT, SOD, GST, GSH‐PX, O2·‐CR, OH·‐CR, and GSH and the expressions of SOD, GSH‐PX, GST, CAT, and Nrf2 genes of juvenile coho salmon in G3 were significantly (p &lt; 0.05) increased, However, the FCR, HSI, the content of MDA, and the expressions of TNF‐α and IL‐6 genes of juvenile coho salmon in G3 were significantly (p &lt; 0.05) decreased. There was no significant effect (p &gt; 0.05) of diet on their survival rate (SR). In conclusion, the fermented soybean meal in the juvenile coho salmon diet can replace 10% of the fish meal protein.

Implications of Metrics and Methodology for Juvenile Salmonid Monitoring in Western Oregon Streams

We attempted to determine whether electrofishing removal estimates or single-pass snorkeling was a more reliable method for Oregon Department of Fish and Wildlife (ODFW) monitoring of juvenile coho salmon (Oncorhynchus kisutch) and steelhead (O. mykiss) abundance and occupancy trends. Based on 1997 to 2000 data, we assumed abundance estimates from the method that tracked more closely with parental abundance would better approximate true juvenile abundance. Parental abundance from spawning ground surveys and juvenile abundance metrics unique to each method were estimated from 2000 to 2004 and 2007 to 2008. Parental abundance did not explain the variation in juvenile abundance from either method (r2 < 0.22), invalidating our assumption, but results had relevance for snorkel surveys used in ODFW monitoring. For both species, correlations between density (fish m2 -1) and abundance (quantity, based on fish km-1) estimates from snorkeling were weak (r < 0.379), but correlations between abundance estimates from both methods were strong (r > 0.846), implying abundance was more appropriate than density for ODFW monitoring. Neither method could sample all habitats, and annually variable proportions of coho salmon (15 to 47%) and steelhead (0 to 24%) abundance estimates obtained by electrofishing were in pools too shallow to meet the ODFW depth criterion for snorkeling. This resulted in lowering the criterion to ≥ 20 cm in 2010. The lower criterion, relative to original, has not shown differences in trends, but 30% more pools have been sampled, resulting in 23% higher abundance estimates with 10% proportionately smaller confidence intervals. These changes improved ODFW monitoring and related management decisions.

Establishing an In Vitro Model to Assess the Toxicity of 6PPD-Quinone and Other Tire Wear Transformation Products

The tire wear transformation product 6PPD-quinone (6PPDQ) has been implicated as the causative factor for broad scale mortality events for coho salmon in the Pacific Northwest. Highly variable sensitivity to 6PPDQ in closely related salmonids complicates efforts to evaluate the broader toxicological impacts to aquatic ecosystems. Our goals were to (1) validate the large range of in vivo species sensitivities reported for coho, Chinook, and sockeye salmon and (2) develop an in vitro platform for assessing 6PPDQ toxicity. In vivo studies confirmed the acute sensitivity of juvenile coho (12 h LC50 = 80.4 ng/L) and demonstrated that sockeye salmon were not vulnerable to mortality. Chinook salmon were sensitive to 6PPDQ mortality at initial concentrations >25 μg/L, ∼10-fold greater than reported environmental measurements. In vitro, the coho salmon cell line CSE-119 was acutely sensitive to 6PPDQ (metabolic EC50 = 7.9 μg/L, cytotoxicity EC50 = 6.1 μg/L). Analogous Chinook (CHSE-214) and sockeye salmon (SSE-5) cell lines were nonresponsive in both assays, and rainbow trout RTG-2 cells began showing metabolic effects at 68 μg/L (EC5). Recreation of species-specific 6PPDQ sensitivity in vitro implicates conserved modes of action in CSE-119 that could be utilized for mechanistic studies of 6PPDQ toxicity and screening of other PPD transformation products.

Housing conditions and biological indices for juvenile coho salmon of 2017–2021 generations grown at the Yansky salmon fish factory in the Magadan region

Biological and morphophysiological parameters of juvenile coho salmon of artificial origin grown at the Yansky salmon hatchery in the Magadan region are analyzed. The breeding conditions and the larvae and juveniles development in 2017–2021 are compared.

Acute Toxicity of 6PPD-Quinone to Early Life Stage Juvenile Chinook (Oncorhynchus tshawytscha) and Coho (Oncorhynchus kisutch) Salmon.

The breakdown product of the rubber tire antioxidant N-(1,3-dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6PPD)-6-PPD-quinone has been strongly implicated in toxic injury and death in coho salmon (Oncorhynchus kisutch) in urban waterways. Whereas recent studies have reported a wide range of sensitivity to 6PPD-quinone in several fish species, little is known about the risks to Chinook salmon (Oncorhynchus tshawytscha), the primary prey of endangered Southern Resident killer whales (Orcinus orca) and the subject of much concern. Chinook face numerous conservation threats in Canada and the United States, with many populations assessed as either endangered or threatened. We evaluated the acute toxicity of 6PPD-quinone to newly feeding (~3 weeks post swim-up) juvenile Chinook and coho. Juvenile Chinook and coho were exposed for 24 h under static conditions to five concentrations of 6PPD-quinone. Juvenile coho were 3 orders of magnitude more sensitive to 6PPD-quinone compared with juvenile Chinook, with 24-h median lethal concentration (LC50) estimates of 41.0 and more than 67 307 ng/L, respectively. The coho LC50 was 2.3-fold lower than what was previously reported for 1+-year-old coho (95 ng/L), highlighting the value of evaluating age-related differences in sensitivity to this toxic tire-related chemical. Both fish species exhibited typical 6PPD-quinone symptomology (gasping, increased ventilation, loss of equilibrium, erratic swimming), with fish that were symptomatic generally exhibiting mortality. The LC50 values derived from our study for coho are below concentrations that have been measured in salmon-bearing waterways, suggesting the potential for population-level consequences in urban waters. The higher relative LC50 values for Chinook compared with coho merits further investigation, including for the potential for population-relevant sublethal effects. Environ Toxicol Chem 2023;42:815-822. © 2023 His Majesty the King in Right of Canada and The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC. Reproduced with the permission of the Minister of Fisheries and Oceans Canada.

Growth Performance, Antioxidant and Immunity Capacity Were Significantly Affected by Feeding Fermented Soybean Meal in Juvenile Coho Salmon (Oncorhynchus kisutch)

This study aims to investigate the effects of partial dietary replacement of fish meal with unfermented and/or fermented soybean meal (fermented by Bacillus cereus) supplemented on the growth performance, whole-body composition, antioxidant and immunity capacity, and their related gene expression of juvenile coho salmon (Oncorhynchus kisutch). Four groups of juveniles (initial weight 159.63 ± 9.54 g) at 6 months of age in triplicate were fed for 12 weeks on four different iso-nitrogen (about 41% dietary protein) and iso-lipid (about 15% dietary lipid) experimental diets. The main results were: Compared with the control diet, the diet with replaced 10% fish meal protein with fermented soybean meal protein supplementation can significantly (p < 0.05) influence the expression of superoxide dismutase, catalase, glutathione peroxidase, glutathione S-transferase, nuclear factor erythroid 2-related factor 2, tumor necrosis factor α and interleukin-6 genes, the growth performance, the serum biochemical indices, and the activity of antioxidant and immunity enzymes. However, there was no significant effect (p > 0.05) on the survival rate (SR) and whole-body composition in the juveniles among the experimental groups. In conclusion, the diet with replaced 10% fish meal protein with fermented soybean meal protein supplementation could significantly increase the growth performance, antioxidant and immunity capacity, and their related gene expression of juveniles.

Estimating Juvenile Salmon Estuarine Carrying Capacities to Support Restoration Planning and Evaluation

Estimating juvenile salmon habitat carrying capacities is a critical need for restoration planning. We assimilated more than 4500 unique estimates of published juvenile densities (e.g., fish/m2) in estuarine and floodplain habitats. These density data were categorized by species and life stage, habitat type, seasonal period, and geographic region to develop frequency statistics (e.g., 25th and 75th percentiles, or quartiles). These frequency statistics were then used in a habitat expansion approach to estimate carrying capacities based on habitat extent. We demonstrate the habitat expansion approach by applying the quantiles of observed juvenile Chinook salmon (Oncorhynchus tshawytscha) and coho salmon (O. kisutch) densities (fish/ha) to spatial data describing current, historical or potential, and predicted (based on seal level rise) habitat extents for 16 coastal Oregon estuaries to estimate carrying capacities. Current carrying capacities based on 75th percentile springtime (Apr–Jun) densities ranged from 2902 to 33,817 fish/delta for Chinook salmon and 2507 to 20,206 fish/delta for coho salmon. Historic carrying capacities during the peak rearing period (spring) ranged from 3869 to 71,844 fish/delta for Chinook salmon and 3201 to 38,337 fish/delta for coho salmon, representing a 3 to 72% loss in Chinook salmon capacity and 2 to 67% loss in coho salmon capacity. Estimated carrying capacities were predicted to decline by 2 to 54% with 1.4 m of sea level rise in systems that are projected to lose vegetated tidal wetland habitat, while a 1 to 320% increase in capacity was predicted for systems that are predicted to increase in area with sea level rise. Finally, we demonstrate how the carrying capacity estimates can be used to estimate changes in juvenile Chinook and coho salmon capacity following restoration, which can be used to both design and evaluate restoration projects.

Forestry influences on salmonid habitat in the North Thompson River watershed, British Columbia

Freshwater ecosystems that support juvenile salmonids can be degraded by human pressures such as forestry. Forestry activities can alter water temperatures and the delivery and storage of water, nutrients, wood, and sediment in streams, resulting in changes to the habitat, growth, and survival of juvenile salmon. Previous research on forestry impacts on habitat has focused on small, intensively monitored coastal systems. Here, we examined forestry activities, watershed characteristics, physical habitat, and stream temperature for 28 mid-sized tributaries of the North Thompson River to examine relationships between forestry and juvenile coho stream habitat in interior watersheds. Forest harvest had a positive correlation to maximum summer stream temperature. Streams with 35% of the riparian area harvested since 1970 had maximum summer temperatures 3.7 °C higher on average than those with 5% harvested. Stream gradient explained most of the variation in physical habitat and had negative correlations to pool cover, pool depth, and fine sediment cover. Taken together, these results indicate that watershed characteristics drive physical habitat, but forest harvest can be a primary driver of water temperatures.

Elodea mediates juvenile salmon growth by altering physical structure in freshwater habitats

Invasive species introductions in high latitudes are accelerating and elevating the need to address questions of their effects on Subarctic and Arctic ecosystems. As a driver of ecosystem function, submerged aquatic vegetation is one of the most deleterious biological invasions to aquatic food webs. The aquatic plant Elodea spp. has potential to be a widespread invader to Arctic and Subarctic ecosystems and is already established in 19 waterbodies in Alaska, USA. Elodea spp. has been found to alter ecosystem processes through multiple pathways; yet little is known about the impact of Elodea spp. on fish life history. A primary concern is the effect of Elodea spp. on juvenile Pacific salmon (Oncorhynchus spp.), because this invading plant can form dense stands in littoral zones, potentially impacting important freshwater rearing habitats used by juvenile fish for foraging and refuge from predators. We used a field experiment to test the effect of Elodea spp. on juvenile coho salmon (O. kisutch) growth in an infested lake near Cordova, Alaska, USA. We found that Elodea spp. stands result in reduced growth and a lower trophic position for juvenile coho salmon over the summer compared to habitats dominated by a native assemblage of aquatic plants. While infested sites were not associated with significant changes in water condition or primary productivity compared to sites dominated by native vegetation, zooplankton densities were reduced, and Elodea spp. height and vegetation richness increased macroinvertebrate densities. Combined, these results indicate that Elodea spp. may alter the flow of energy to juvenile salmon by restructuring space and affecting prey resources for rearing fish. Furthermore, these results suggest that widespread establishment of Elodea spp. may alter the quality of habitat for juvenile salmon and, by affecting juvenile fish growth, could lead to population-level impacts on salmon returns.

Colonization of a temperate river by mobile fish following habitat reconnection

AbstractMobile species are particularly affected by artificial barriers requiring large investments to restore connectivity. However, few large‐scale, long‐term studies have investigated the ecological outcomes of restoring connectivity for these species. Our study, spanning 15–20 years, quantified response trajectories, which represent temporal trends following disturbance, of three native salmonids colonizing 20 km of protected habitat following restoration of fish passage at Landsburg Dam, Cedar River, WA, in 2003. Built in 1901, the dam blocked the upriver movement of native anadromous coho and Chinook salmon and nonanadromous mountain whitefish for 102 years. Restoration effectiveness was also assessed by comparing temporal trends in freshwater productivity of juvenile coho and Chinook salmon in the Cedar River after restoration to a nearby undammed subbasin. We also compared summer densities of juvenile coho and Chinook salmon, and mountain whitefish above the dam measured a decade after restoration to undammed reference systems. Anadromous salmon and nonanadromous mountain whitefish populations increased linearly or nonlinearly following restoration. The positive, asymptotic response represented by adult Chinook salmon counts indicates a slowing in population recovery rate, plateauing a decade after restoration. In contrast, annual abundance of adult coho salmon increased at a constant rate, indicating additional capacity 15 years post‐restoration. Salmonid compositional diversity, driven largely by juvenile coho salmon, also increased nonlinearly, plateauing in a decade. We observed substantial spatial variation in the temporal response, as juvenile coho salmon and mountain whitefish population expansion slowed linearly with upstream distance from the restoration site. There was evidence that some of the annual variation in salmonid biomass in summer was a result of discharge variability in winter and spring, with biomass declining as flow variability increased. Species reintroduction and establishment had no discernible effect on stream‐rearing salmonids living above the dam before restoration, while increasing coho freshwater productivity at the subbasin scale. Results from our study showed recolonization by three mobile species, each with a unique life history, takes at least a decade or more and was dependent on species and life stage, size of the spawning population, distance from restoration site, and annual variability in streamflow.

Differential heat shock protein responses in two species of Pacific salmon and their utility in identifying heat stress

Abstract Rapid and accelerating warming of salmon habitat has the potential to lower productivity of Pacific salmon (Oncorhynchus species) populations. Heat stress biomarkers can indicate where warming is most likely affecting fish populations; however, we often lack clear classifications that separate individuals with and without heat stress needed to make these tools operational. We conducted a heat exposure experiment with trials lasting 12 or 36 h using juvenile Chinook salmon (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) to validate heat stress biomarkers in white muscle. Following habituation to 13°C, individuals were exposed to water temperatures that increased to 15°C, 17°C, 19°C, 21°C or 23°C. Heat shock protein 70 abundance (HSP70 measured by ELISA) and transcription of 13 genes (mRNA measured by qPCR) including three heat shock protein genes (hsp70, hsp90, hsp27) were measured. A distinct heat stress response was apparent by 21°C in juvenile Chinook salmon and 23°C in juvenile coho salmon using HSP70. A threshold for heat stress classification in Chinook salmon of &amp;gt; 2 ng HSP70 mg.1 total protein identified heat stress in 100% of 21 and 23°C treated individuals compared to 4% in cooler treatments. For coho salmon, &amp;gt; 3 ng HSP70 mg.1 total protein identified heat stress in 100% of 23°C treated individuals compared to 4% in cooler treatments. Transcription from a panel of genes separated individuals between cooler and stressful temperature experiences (≥21°C for Chinook salmon and ≥23°C for coho salmon) with ~ 85% correct classification. Our findings indicate that juvenile Chinook salmon were more temperature-sensitive than juvenile coho salmon and support the use of a HSP70 threshold sampled from muscle for assessing heat stress in individual wild Pacific salmon with an option for non-lethal biopsies for spawning adults.