In laser systems, it is well known that beam pointing is shifted due to many un-modeled factors, such as vibrations from the hardware platform and air disturbance. In addition, beam-pointing shift also varies with laser sources as well as time, rendering the modeling of shifting errors difficult. While a few works have addressed the problem of predicting shift dynamics, several challenges still remain. Specifically, a generic approach that can be easily applied to different laser systems is highly desired. In contrast to physical modeling approaches, we aim to predict beam-pointing drift using a well-established probabilistic learning approach, i.e., the Gaussian mixture model. By exploiting sampled datapoints (collected from the laser system) comprising time and corresponding shifting errors, the joint distribution of time and shifting error can be estimated. Subsequently, Gaussian mixture regression is employed to predict the shifting error at any query time. The proposed learning scheme is verified in a pulsed laser system (1064nm, Nd:YAG, 100Hz), showing that the drift prediction approach achieves remarkable performances.