Low-pressure hydrogen recovery is crucial for the fusion reactor deuterium-tritium fuel cycle, and the usual treatment is achieved through multiple steps of enrichment and separation, which has the drawbacks of complex processes and high energy consumption. In this work, a membrane permeator including 12 sets of Pd92Y8 at% alloy tubes has been investigated for the permeability and extraction of hydrogen in low-pressure mixtures. The hydrogen permeation through dense Pd-based membrane mechanism and corresponding Sieverts’ exponents have been verified. The concentration polarization effect is deducted from the results. Through pure hydrogen permeation test, the cold-rolling 80 μm thick Pd92Y8 at% membrane has hydrogen permeability at 400 °C of 3.43×10−8 mol∙m−1∙s−1∙Pa−0.5, which is higher than that of PdAg alloy membrane under the same conditions. Highly efficient recovery efficiency has been achieved for low hydrogen pressure mixtures, and the PdY alloy membrane permeator with 678 cm2 effective area could reach around 95% hydrogen extraction recovery for 0.1 mol% hydrogen-helium mixture and 97.74% recovery for 0.33 mol% at the rate of 21 standard liter per minute (SLM). It indicates that the PdY alloy membrane permeation can be an alternative solution for efficiently recovering low-pressure hydrogen isotopes in tritium extraction gas.