Microstructure degradation caused by interdiffusion between coating and superalloy is an important factor affecting the performance of thermal barrier coatings. Tuning the interdiffusion microstructure of PtAl Coatings/Superalloys interface is the key to preparing high performance thermal barrier coatings. In this paper, two β-(Ni, Pt)Al coatings with different compositions and thicknesses were first deposited on the same nickel-based single-crystal superalloy by regulating the aluminizing time. After the isothermal oxidation at 1100 °C, a typical two-layer structure forms in the two different coating/superalloy specimens but with different interdiffusion microstructures. It was found that a noticeable secondary reaction zone (SRZ) with topologically close-packed (TCP) precipitates develop in the specimen with 6 h aluminizing after oxidation for 36 h and its thickness continuously increase. By contrast, no SRZ forms in the specimen with 4.5 h aluminizing after oxidation for even 100 h, but only the microstructure transformation of the interdiffusion zone (IDZ) occurred. That is mainly due to the existence of an incomplete transformed sublayer in the as-prepared specimen with a short aluminizing time, which may affect the subsequent interdiffusion of Al, Ni, and refractory elements. It is highly expected that regulating the aluminizing time is an effective strategy to tune the interdiffusion structure between coating and substrate, which should be helpful for designing the coating/substrate system with better performance.