Wetlands provide numerous ecosystem services to the environment, such as nutrient removal and storage. The aim of this work is to evaluate the nutrient dynamics in different sectors within wetland systems in the south of the Samborombón Bay (Argentina) based on hydrological and/or anthropogenic variations. For this purpose, the hydrological features of the wetland were defined through the analysis of satellite images, precipitation and tidal data, and field surveys. Three sectors were identified in the wetland: one with tidal influence, another which is dependent on rainfall, and another that receives inputs from rainfall and from a sewage effluent treatment plant. In order to analyze the nutrient dynamics, samples of surface water, groundwater, and sediments were collected from these sectors. Measurements of pH and electrical conductivity were determined in situ in water samples, while the concentration of inorganic forms of phosphorus and nitrogen, soluble reactive silica, and organic carbon were determined through laboratory analysis. Also, bioavailable phosphorus, organic matter, pH, and electrical conductivity were determined in the sediment samples collected. Statistical analysis of the data reveals differences between the sectors and allows the interpretation of the dynamics of the studied components in the wetland. Electrical conductivity distinguishes the intertidal sectors of the wetland while components associated with P and N discriminate the sectors with inputs from the sewage effluent treatment plant. On the other hand, soluble reactive silica, organic carbon, and organic matter do not seem to be influenced by the tide or effluent discharge. This study demonstrates that the studied wetland works as a nutrient retention area, providing ecosystem services to local inhabitants. Although these services can be utilized, they require a continuous monitoring over time to provide an early warning in case the variations in P and N cycles could lead to eutrophication or wetland degradation.