The issue of agricultural land abandonment in southern Europe has raised concerns about its impact on biodiversity. While abandoned areas can lead to positive developments like creating new habitats and restoring native vegetation, they can also result in human–wildlife conflicts, particularly in areas with extensive farming and free‐ranging livestock. To understand habitat selection and use of livestock and wild ungulates, it is essential to study their spatial and temporal distribution patterns. In this context, we conducted a long‐term large mammal monitoring project using camera traps in the Peneda‐Gerês National Park in northern Portugal. Our primary focus was on exploring habitat preferences, occupancy dynamics, and potential spatial use correlations between domestic and wild species, utilizing dynamic occupancy models. Most wild species exhibited stable area use patterns, while domestic species experienced marginal declines, and the Iberian ibex displayed signs of repopulation. We observed distinct effects of habitat variables on occupancy, colonization, and extinction, revealing species‐specific patterns of habitat utilization. Human disturbance had a notable impact on domestic species but did not affect wild ones. Camera sensitivity emerged as a critical factor, enhancing detection probability for all species. Additionally, habitat and weather variables exerted varying effects on detection probabilities, underscoring the necessity of accounting for these factors in modeling the detection process. We found shared habitat preferences between cattle and horses, both positively correlated with wolves, suggesting potential human–wildlife conflicts. Despite extensive spatial overlap, domestic and wild species seem to exhibit ecological independence possibly due to distinct strategies and low predation pressure. Overall, the study emphasizes the multifaceted factors influencing habitat use. The observed species associations contribute to understanding ecological relationships and potential resource competition, emphasizing the importance of considering environmental variables for effective wildlife conservation and management.
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