Inbreeding Depression In Plants Research Articles

Low levels of inbreeding depression and enhanced fitness in cleistogamous progeny in the annual plantTriodanis perfoliata

The maintenance of outcrossing in cleistogamous plants that produce both open, facultatively outcrossing chasmogamous (CH), and closed, obligate selfing cleistogamous (CL) flowers is puzzling because CL reproduction is thought to be more reliable and less costly. A possible explanation for the maintenance of CH flowers is the avoidance of inbreeding depression. However, inbreeding depression for cleistogamous species has rarely been quantified. In this study, we estimate levels of inbreeding depression in plants from three populations of Triodanis perfoliata (L.) Nieuwl., a dimorphic cleistogamous annual, under greenhouse conditions. Estimates of inbreeding depression at multiple life stages in all three populations were low and often not different from zero. Inbreeding depression at specific life stages varied, with two populations showing later-acting inbreeding depression, which is also found in other selfing species. In two of the study populations, selfed CL progeny outperformed selfed CH progeny, indicating a flower-type effect. The low levels of inbreeding depression and the superior fitness of CL compared with selfed CH flowers that we observed make the maintenance of CH flowers in this system surprising, and suggest that other advantages of outcrossing CH flowers are likely responsible for maintaining mixed mating in this species.

Inbreeding depression in crambe1

ABSTRACT Inbreeding depression in plants, caused by selfing or crossing among plants with a high degree of relatedness, is a genetic phenomenon that affects quantitative traits. This study aimed at verifying the occurrence of inbreeding depression in crambe progenies originated from selfing, in comparison with open pollination progenies. A randomized blocks design, with three replications, in a 32 x 2 factorial arrangement, with 32 crambe progenies and two reproduction systems (artificial selfing and open pollination), was used. Grain yield, 1,000-grain weight, plant height and final stand were evaluated. A significant interaction was observed between progenies and reproduction systems in all traits evaluated. A reduction in grain yield, 1,000-grain weight and plant height occurred in the majority of the selfing progenies, when compared to open pollination progenies. Inbreeding depression was observed in all traits, especially for grain yield. The heritability coefficients of selfed progenies were higher than the open pollinated ones, except for 1,000-grain weight.

EFFECTS OF INBREEDING IN MIMULUS GUTTATUS ON TOLERANCE TO HERBIVORY IN NATURAL ENVIRONMENTS

Inbreeding, which is common in plants, may increase the vulnerability of populations to natural enemies. Similarly, natural enemies may increase the expression of inbreeding depression in their hosts, resulting in altered selection on host mating-system evolution. To examine effects of inbreeding on tolerance to herbivory, we transplanted experimentally self- and cross-fertilized plants into four field populations of Mimulus guttatus and applied single Philaenus spumarius (spittlebug) nymphs to half. At the end of the growing season, we scored plants for five fitness components (reproductive effort, biomass, survival, probability of producing flowers or buds, and probability of bolting). Inbreeding reduced population-level tolerance to spittlebug herbivory with respect to plant aboveground biomass. Inbreeding effects on tolerance varied significantly among plant families for three fitness traits, indicating the opportunity for selection by herbivores to improve tolerance in inbreeding populations. These results also indicate that herbivores can alter inbreeding depression in plants. Our results mirror earlier greenhouse studies of inbreeding effects on plant–herbivore interactions, and demonstrate that these effects can be manifested in natural settings as well. This study indicates that inbreeding in natural populations can affect fitness not only directly, but also indirectly through altered interactions with natural enemies.

Recent approaches into the genetic basis of inbreeding depression in plants.

Predictions for the evolution of mating systems and genetic load vary, depending on the genetic basis of inbreeding depression (dominance versus overdominance, epistasis and the relative frequencies of genes of large and small effect). A distinction between the dominance and overdominance hypotheses is that deleterious recessive mutations should be purged in inbreeding populations. Comparative studies of populations differing in their level of inbreeding and experimental approaches that allow selection among inbred lines support this prediction. More direct biometric approaches provide strong support for the importance of partly recessive deleterious alleles. Investigators using molecular markers to study quantitative trait loci (QTL) often find support for overdominance, though pseudo-overdominance (deleterious alleles linked in repulsion) may bias this perception. QTL and biometric studies of inbred lines often find evidence for epistasis, which may also contribute to the perception of overdominance, though this may be because of the divergent lines initially crossed in QTL studies. Studies of marker segregation distortion commonly uncover genes of major effect on viability, but these have only minor contributions to inbreeding depression. Although considerable progress has been made in understanding the genetic basis of inbreeding depression, we feel that all three aspects merit more study in natural plant populations.

The effect of drought stress on inbreeding depression in four populations of the Mediterranean outcrossing plant Crepis sancta (Asteraceae).

The effect of physiological stress on the magnitude of inbreeding depression in plants has been the subject of few studies and is currently controversial because of contradictory results. We measured the inbreeding depression at three drought stress levels, precisely defined by a preliminary physiological experiment. We also tested the hypothesis that more highly self-compatible populations exhibit reduced inbreeding depression due to purging of deleterious mutations. The study was conducted on two populations of the annual and allogamous plant Crepis sancta collected from the French Mediterranean region and two other populations from marginal areas with various self-incompatibility levels. Drought stress did not increase inbreeding depression in terms of plant mortality but significantly increased the inbreeding depression for the date of first flowering, number of heads per plant and relative growth rate. The most self-fertile marginal population showed an absence of inbreeding depression in most of the measured traits indicating that purging could have taken place in this population. The three others populations showed relatively low and similar estimates of inbreeding depression (delta approximately 0.35). The relatively low values obtained compared to the results found in allogamous plants suggests that the absence of competition for C. sancta in our experiment probably underestimated the effects of inbreeding in natural populations where competition occurs.

Whole-Genome Characterization of Embryonic Stage Inbreeding Depression in a Selfed Loblolly Pine Family

Inbreeding depression is important in the evolution of plant populations and mating systems. Previous studies have suggested that early-acting inbreeding depression in plants is primarily due to lethal alleles and possibly epistatic interactions. Recent advances in molecular markers now make genetic mapping a powerful tool to study the genetic architecture of inbreeding depression. We describe a genome-wide evaluation of embryonic viability loci in a selfed family of loblolly pine (Pinus taeda L.), using data from AFLP markers from an essentially complete genome map. Locus positions and effects were estimated from segregation ratios using a maximum-likelihood interval mapping procedure. We identified 19 loci showing moderately deleterious to lethal embryonic effects. These loci account for >13 lethal equivalents, greater than the average of 8.5 lethal equivalents reported for loblolly pine. Viability alleles show predominantly recessive action, although potential overdominance occurs at 3 loci. We found no evidence for epistasis in the distribution of pairwise marker correlations or in the regression of fitness on the number of markers linked to deleterious alleles. The predominant role of semilethal alleles in embryonic inbreeding depression has implications for the evolution of isolated populations and for genetic conservation and breeding programs in conifers.

Detecting Publication Bias in Meta-analyses: A Case Study of Fluctuating Asymmetry and Sexual Selection.

Those familiar with human nature and the publication process acknowledge that biases due to selective reporting of results are likely widespread in all fields of academic inquiry that depend on tools of statistical inference (e.g., see Begg and Berlin 1988; Iyengar and Greenhouse 1988; and the extensive discussion following each). However, although qualitative and quantitative methods exist for assessing the prevalence of selective reporting, and selective reporting has been studied in the medical and social sciences (Begg 1994, and references therein), the issue has received little attention in recent meta-analyses of ecological and evolutionary patterns. Clearly, “if publication bias is present, and if it operates in the same direction for all studies (as is likely), then [meta-analysis] is likely not only to produce biased summary estimates but also to produce estimates which are apparently precise and accurate leading to conclusions which may not only be wrong but appear convincing” (Begg and Berlin 1988, p. 437). To biologists unacquainted with the formal study of publication patterns, the terms “selective reporting” (statistical significance of an outcome influences its likelihood of being reported or published) and “publication bias” (the inflation of average effect size due to selective reporting) may imply a conscious intent to deceive, but this

Inbreeding depression in Campanula rapunculoides L. I. A comparison of inbreeding depression in plants derived from strong and weak self-incompatibility phenotypes

Abstract The evolution of selfing taxa from outcrossing ancestors has occurred repeatedly and is the subject of many theoretical models, yet few empirical studies have examined the immediate consequences of inbreeding in a population with variable expression of self-incompatibility. Because self-incompatibility breaks down with floral age in Campanula rapunculoides, we were able to mate outbred and selfed maternal plants in a crossing design which produced progeny with inbreeding coefficients of 0, 0.25, 0.50 and 0.75. Cumulative inbreeding depression in plants that were selfed for one generation was very high in families derived from strongly self-incompatible plants (average δ = 0.98), and somewhat lower in families derived from plants with weaker expression of self-incompatibility (average δ = 0.90). Relative to outbred progeny, inbred progeny produced fewer seeds, had lower rates of germination, less vegetative growth and fewer flowers per plant. Inbred progeny also took longer to germinate, and longer to produce a first leaf and to flower. Interestingly, inbred plants also produced 40% fewer seeds than outcrossed plants (t-test P < 0.001) even when mated to the same, unrelated pollen donor, suggesting that inbreeding can produce profound maternal effects. Most importantly, our results demonstrate that progeny derived from plants with stronger expression of self-incompatibility exhibited greater levels of inbreeding depression than progeny from plants with weaker expression of self-incompatibility. Moreover, the decline in fitness (cumulative, ln-transformed) over the four inbreeding levels was steeper for the progeny of the strongly self-incompatible lineages. These empirical results suggest that inbreeding depression and mating system phenotype have the potential to coevolve.

Inferring the genetic basis of inbreeding depression in plants

Recent progress in the genetic analysis of inbreeding depression in plants is reviewed. While the debate over the importance of genes of dominance versus overdominance effect continues, the scope of inferences has widened and now includes such facets as the interactions between genes, the relative abundance of major versus minor genes, life cycle stage expression, and mutation rates. The types of inferences are classified into the genomic, where many genes are characterized as an average, and the genic, where individual genes are characterized. Genomic inferences can be based upon natural levels of inbreeding depression, purging experiments, the comparison of individuals of differing F (e.g., prior inbreeding), and various crossing designs. Genic inferences mainly involve mapping and characterizing loci with genetic markers, involving either a single cross or, ideally, several crosses. Alternative statistical models for analyzing polymorphic loci causing inbreeding depression should be a fruitful problem for geneticists to pursue. Key words : inbreeding depression, genetic load, self-fertilization, QTL mapping.

Evolution of the Magnitude and Timing of Inbreeding Depression in Plants

Evolution of the Magnitude and Timing of Inbreeding Depression in Plants

A variety of epistatic interactions can occur between partially homologous transgene loci brought together by sexual crossing.

Epistatic interactions between unlinked transgene loci in tobacco plants were studied following sexual crosses between different transgenic lines. Three potential "modifier" transgene loci, which were structurally similar but integrated at different chromosomal locations, were tested for their ability to influence the expression of a partially homologous "target" transgene locus. After introduction of an individual modifier locus, the target locus could be either unaffected, completely inactivated and methylated or differentially sensitive, showing more complete inactivation and methylation when homozygous than when hemizygous. The implications of these results for inbreeding depression in plants are discussed.

The Evolution of Self-Fertilization and Inbreeding Depression in Plants. II. Empirical Observations

The Evolution of Self-Fertilization and Inbreeding Depression in Plants. II. Empirical Observations

The Evolution of Self-Fertilization and Inbreeding Depression in Plants. I. Genetic Models

The Evolution of Self-Fertilization and Inbreeding Depression in Plants. I. Genetic Models