Host 1a Research Articles

C–H⋯S Hydrogen Bond Assisted Supramolecular Encapsulation of Fullerenes with Nanobelts

C–H⋯S Hydrogen Bond Assisted Supramolecular Encapsulation of Fullerenes with Nanobelts

Formation of Ternary Inclusion Crystal and Enantioseparation of Alkyl Aryl Sulfoxides by the Salt of Urea-Modified l-Phenylalanine and an Achiral Amine

Chiral supramolecular hosts comprising urea-modified l-phenylalanines and achiral primary amines were developed, which facilitated enantioselective inclusion of alkyl aryl sulfoxides (3) up to 89% ee owing to the formation of ternary inclusion crystals. From the structural optimization of the components, the combination of N-(phenylcarbamoyl)-l-phenylalanine (1a) and benzhydrylamine (2e) showed the best inclusion ability among the considered supramolecular hosts. The type of the hydrogen-bonding network of ammonium-carboxylate salts 1a·2 was dependent on the steric bulk of combined primary amine 2. The rigid phenylurea moiety of 1a and moderate steric bulk of 2e played an important role in their high inclusion ability. Host 1a·2e afforded two ternary polymorphic inclusion crystals with the inclusion of acetonitrile. Furthermore, the crystal structures of 1a·2e·3 revealed that the inclusion of 3 was assisted by hydrogen bonding to the host and that stereoselectivity reversal occurred for larger sulfoxides, which was attributed to packing variations of one-dimensional hydrogen-bonding networks.

Biotinylated Cyclophane: Synthesis, Cyclophane-Avidin Conjugates, and Their Enhanced Guest-Binding Affinity.

Cationic and anionic cyclophanes bearing a biotin moiety were synthesized as a water-soluble host (1a and 1b, respectively). Both hosts 1a and 1b were found to strongly bind avidin with binding constants of 1.3 × 10(8) M(-1), as confirmed by surface plasmon resonance measurements. The present conjugate of 1a with avidin (1a-avidin) showed an enhanced guest binding affinity toward fluorescence guests such as TNS and 2,6-ANS. The K values of 1a-avidin conjugate with TNS and 2,6-ANS were ~19-fold larger than those of monocyclic cyclophane 1a with the identical guests. Favorable hydrophobic and electrostatic interactions between 1a-avidin and TNS were suggested by computer-aided molecular modeling calculations. Moreover, addition of excess biotin to the complexes of 1a-avidin with the guests resulted in dissociation of 1a-avidin to avidin and 1a having less guest-binding affinity. Conversely, such enhancements in the guest-binding affinity were not obviously observed for the conjugate of anionic 1b with avidin (1b-avidin) due to electrostatic repulsion between anionic 1b and anionic guests.

Synthesis of coumarin-appended cyclophanes and evaluation of their complexation with myoglobin

Coumarin-appended cyclophanes bearing positively or negatively charged side chains were synthesized as a water-soluble host (1a or 1b, respectively). Host 1a and 1b showed fluorescence bands with fluorescence maxima at 404 nm originated from coumarin moiety. As a host for guest molecules by using macrocyclic cavity, cationic host 1a binds anionic guests such as 6-p-toluidinonaphthalene-2-sulfonate (TNS), 6-anilinonaphthalene-2-sulfonate (2,6-ANS), and 8-anilinonaphthalene-1-sulfonate (1,8-ANS) more strongly than anionic host 1b, reflecting intermolecular electrostatic interactions. In addition, both host 1a and 1b showed protein surface recognition and fluorescence response toward myoglobin, a small and globular protein. The fluorescence intensity originating from the hosts decreased upon the addition of myoglobin, reflecting the formation of 1a- and 1b-myoglobin complexes. On the other hand, such fluorescence response of 1a and 1b was almost negligible for other proteins such as egg white albumin, bovine serum albumin, human albumin, concanavaline A, fibrinogen, γ-globlin, peanut agglutinin, trypsin, and lysozyme.

Tripodal pyrrolotetrathiafulvalene receptors for recognition of electron-deficient molecular guests

We report the synthesis of tripodal receptors with monopyrrolo-tetrathiafulvalene arms 1a,b, based on 1,3,5-substituted 2,4,6-triethylbenzene scaffold. The three converging pyrrolotetrathiafulvalene groups form an electron rich cone-shaped binding site. Molecular hosts 1a,b are capable of binding neutral electron deficient guests in solution, as well as positively charged pyridinium species in the gas phase.

Through-the-Annulus Threading of the Larger Calix[8]arene Macrocycle

A complete study of the through-the-annulus threading of the larger calix[8]arene macrocycle with di-n-alkylammonium cations has been performed in the presence of the "superweak" TFPB counterion. Thus, it was found that such threading occurs only upon partial preorganization of the calix[8]arene macroring by intramolecular bridging. In particular, 1,5-bridged calix[8]arenes with a meta- or para-xylylene bridge (2 and 3) gave pseudo[2]rotaxanes in which one dialkylammonium axle (4a-4e(+)) was threaded into one of the two subcavities of the calix[8]-wheel. Conformational studies by using chemical shift surface maps and DFT calculations evidenced a 3/4-cone geometry for these subcavities. Higher pseudorotaxane K(ass) values were obtained for calix[8]-wheels 2 and 3, with respect to calix[6]-host 1a, due to the cooperative effect of their two subcavities. Dynamic NMR studies on calix[8]-pseudorotaxanes evidenced a direct correlation between K(ass) (and ΔG(ass)) values and energy barriers for calix inversion due to the effectiveness of thread templation. In accordance with DFT calculations, an endo-alkyl preference, over the endo-benzyl one, was observed by threading calix[8]-wheel 3 with the directional n-butylbenzylammonium axle 4d(+).

Solvent-Controlled Metal Ion Binding Selectivity and Anion Interaction of the Acridinedione-Based Heteroditopic Host

Acridinedione-based heteroditopic hosts 1a-c, which contain a flexible oxyethylene moiety as a metal ion binding site and amino hydrogen as an anion receptor unit, were synthesized and characterized. Metal ion and anion binding studies were carried out in different solvents to understand the solvent-induced selectivity of the metal ion binding and anion interactions. In acetonitrile, Ca(2+) alone shows a binding with the oxyethylene unit and -OCH(3) group, which results in a fluorescence enhancement without any spectral shift due to the suppression of the photoinduced electron transfer (PET) process. In chloroform, in addition to Ca(2+), Na(+) also shows a fluorescence enhancement with a 14 nm red shift in the emission maximum. (1)H NMR titration studies confirm that the addition of Na(+) does not involve binding at the oxyethylene moiety, while it shows a binding at the acridinedione carbonyl group and -OCH(3) group, which results in the red shift and fluorescence enhancement, respectively. In the anion interaction studies, F(-) shows a neat deprotonation in polar aprotic solvents, whereas in chloroform, it shows a H-bond complex due to the lower anion desolvation energy. The present study clearly signifies the role of solvent in metal ion selectivity, which is an often unnoticed parameter in metal ion binding.

Isomeric Squaraine‐Based [2]Pseudorotaxanes and [2]Rotaxanes: Synthesis, Optical Properties, and Their Tubular Structures in the Solid State

On the basis of formation of [2]pseudorotaxane complexes between triptycene-derived tetralactam macrocycles 1a and 1b and squaraine dyes, construction of squaraine-based [2]rotaxanes through clipping reactions were studied in detail. As a result, when two symmetrical squaraines 2d and 2e were utilized as templates, two pairs of isomeric [2]rotaxanes 3a-b and 4a-b as diastereomers were obtained, owing to the two possible linking modes of triptycene derivatives. It was also found, interestingly, that when a nonsymmetrical dye 2g was involved, there existed simultaneously three isomers of [2]rotaxanes in one reaction due to the different directions of the guest threading. The (1)H NMR and 2D NOESY NMR spectra were used to distinguish the isomers, and the yield of [2]rotaxane 5a with the benzyl group in the wider rim of the host 1a was found to be higher than that of another isomer 5b with an opposite direction of the guest, which indicated the partial selection of the threading direction. The X-ray structures of 3b and 4a showed that, except for the standard hydrogen bonds between the amide protons of the hosts and the carbonyl oxygen atoms of the guests, multiple pi...pi stacking and C-H...pi interactions between triptycene subunits and aromatic rings of the guests also participated in the complexation. Crystallographic studies also revealed that the [2]rotaxane molecules 3b and 4a further self-assembled into tubular structures in the solid state with the squaraine dyes inside the channels. In the case of 4a, all the nonsymmetrical macrocyclic molecules pointed in one direction, which suggests the formation of oriented tubular structures. Moreover, it was also found that the squaraines encapsulated in the triptycene-derived macrocycles were protected from chemical attack, and subsequently have potential applications in imaging probes and other biomedical areas.

Phase transfer of monosaccharides through noncovalent interactions: selective extraction of glucose by a lipophilic cage receptor.

We have previously shown that macrotricyclic host 1a is a powerful receptor for glucopyranosyl units in the nonpolar medium of chloroform. However, the solubility properties of 1a did not permit studies of the extraction of carbohydrates from aqueous solution. This paper describes the synthesis of the new variant 1b, furnished with a highly lipophilic exterior array of 12 benzyloxy substituents. In homogeneous solution, 1b behaves much as 1a, binding n-octyl beta-d-glucoside with K(a) = 720 M(-1) in CD(3)OH/CDCl(3) (8:92). In two-phase experiments, the improved solubility of 1b allows carbohydrate extraction to be observed. Three hexoses (glucose, galactose, and mannose), two pentoses (ribose and xylose), and the two methyl glucosides are all extracted substantially into chloroform from 1 M aqueous solutions. Among the hexoses, 1b shows notable affinity and selectivity for glucose, extracting detectable amounts even from 0.1 M aqueous solutions.

Assembly and Binding Properties of Osmate Ester-Bridged Binuclear Macrocycles

Osmium (VI)-bridged macrocycles 1a−c, 2, and 3 assemble spontaneously when osmium tetraoxide, olefins, and L-shaped bispyridyl ligands are mixed in CHCl3. The macrocycles possess well-defined square or rectangular cavities enclosed by aryl walls and act as host molecules. Hydrogen-bond donors on the inner surface of the hosts offer binding sites to acceptors of guests with complementary dimensions. The host 1a binds adipamide G2 (Ka = 3.6 × 104 M-1) and terephthalamide G6 (Ka = 2.0 × 104 M-1), while it binds negligibly (Ka < 10 M-1) benzamide G5, isophthalamide G9, or 1,4-naphthalenedicarboxamide G10. The larger hosts 2 and 3 bind the longer guests biphenyldicarboxamide G12 and terphenyldicarboxamide G17, respectively, but shorter guests such as adipamide G2 and terephthalamide G6 are not well-bound (Ka < 10 M-1). Hosts 1a−c with different remote substituents (H, OMe, NO2) but identical cavity size were prepared and their binding affinities were measured. The relative binding affinities of the hosts 1a−c ...

C–H···π Hydrogen Bonding between Electron-Rich Benzene Rings and Polarized C–H Bonds: Selectivity in the Complexation of Highly Hydrophilic Guest Molecules with Calix[4]resorcarene Hosts in Water

Abstract Tetrasulfonate derivatives of calix[4]resorcarene (calix[4]arene derived from resorcinol) (1) form 1 : 1 complexes with highly hydrophilic guest molecules, such as ethers, alcohols, ketones, and sulfoxides, in water. The affinities of three types of the guests increase in the order CH3–X–CH3 &amp;lt; (–CH2CH2–X–)2 &amp;lt; CH3–X–CH2CH2–X–CH3 (X = O, CH(OH), C=O, or S=O), reflecting the importance of multiple host-guest interactions. The binding constants (K) with respect to X increase in the order O &amp;lt; CH(OH) &amp;lt; C=O &amp;lt; S=O or CH(OH) &amp;lt; O &amp;lt; C=O &amp;lt; S=O. As for the effects of substituents Y on 2-C of the benzene rings of the host, both 1b (Y = CH3) and 1c (Y = OH) exhibit higher binding capabilities than does the parent host 1a (Y = H). Thus, the present complexation is promoted by electron-withdrawing residue (X) in the guests and electron-donating substituents (Y) in the host. The binding of CH3–X–CH3 (X = C=O or S=O) to hosts 1a—c is characterized by favorable enthalpy changes and unfavorable entropy changes. These results, coupled with NMR data, indicate that the driving force of the present complexation is a C–H···π interaction between C–H bonds of a guest as soft acids and benzene rings of the host as soft bases.

Hydrogen-bonded network and enforced supramolecular cavities in molecular crystals: An orthogonal aromatic-triad strategy. Guest binding, molecular recognition, and molecular alignment properties of a bisresorcinol derivative of anthracene in the crystalline state

Abstract Crystallization of an orthogonal resorcinol-anthracene-resorcinol compound 1a (host) from an ester solvent such as alkyl benzoate (guest) affords a 1:2 host-guest adduct 1a·2(ester). An essential aspect of the crystal structures of ethyl, propyl, and isobutyl benzoate adducts (space group, P21/n) and also that of methyl benzoate adduct (C2/c) is an extensive hydrogen-bonded network of host 1a, leading to a molecular sheet composed of hydrogen-bonded polyresorcinol chains and anthracene columns. This network generates well-defined, cyclophane-like supramolecular cavities, which incorporate two alkyl benzoate molecules in a highly selective manner via a combination of essential host-guest hydrogen-bonding and what may be called the cavity-packing effect. The selectivity factor between methyl benzoate (the lowest-affinity guest) and isobutyl benzoate (the highest-affinity guest) is 1:70 under competitive conditions. The actual geometry of the cavity is somehow dependent on and hence induced-fit adju...

Complexation of methylammonium salts and sugar-related alcohols with resorcinol cyclic tetramer in water: An implication of the CH-π interaction on polar guest binding

Abstract Methylammonium cations and sugar-related alcohols are bound to the tetrasulphonate derivatives 1a-1c of the resorcinol cyclic tetramer in water. With respect to the change in substituent X on C-2 of the benzene rings of the host, both 1b (X = CH3, highly hydrophobic and moderately electron-donating) and 1c (X = OH, highly hydrophilic and highly electron-donating) exhibit higher binding abilities than the parent host 1a (X = H). These results suggest that the CH-π interaction, involving polarized C-H bonds of the guest and electron-rich benzene rings of the host, makes a substantial contribution to the guest-binding process. Host 1c even binds more hydrophilic dioxygen-functionalized sugar models (cis-1,2-cyclohexanediol, 2-oxacyclohexyl-1-carbinol and 2-oxacyclopentyl-1-carbinol) more strongly than the corresponding more hydrophobic mono-ols (cyclohexanol, cyclohexylcarbinol and cyclopentylcarbinol).