Holarctic Range Research Articles

Genomic underpinnings of head and body shape in Arctic charr ecomorph pairs.

Across its Holarctic range, Arctic charr (Salvelinus alpinus) populations have diverged into distinct trophic specialists across independent replicate lakes. The major aspect of divergence between ecomorphs is in head shape and body shape, which are ecomorphological traits reflecting niche use. However, whether the genomic underpinnings of these parallel divergences are consistent across replicates was unknown but key for resolving the substrate of parallel evolution. We investigated the genomic basis of head shape and body shape morphology across four benthivore-planktivore ecomorph pairs of Arctic charr in Scotland. Through genome-wide association analyses, we found genomic regions associated with head shape (89 SNPs) or body shape (180 SNPs) separately and 50 of these SNPs were strongly associated with both body and head shape morphology. For each trait separately, only a small number of SNPs were shared across all ecomorph pairs (3 SNPs for head shape and 10 SNPs for body shape). Signs of selection on the associated genomic regions varied across pairs, consistent with evolutionary demography differing considerably across lakes. Using a comprehensive database of salmonid QTLs newly augmented and mapped to a charr genome, we found several of the head- and body-shape-associated SNPs were within or near morphology QTLs from other salmonid species, reflecting a shared genetic basis for these phenotypes across species. Overall, our results demonstrate how parallel ecotype divergences can have both population-specific and deeply shared genomic underpinnings across replicates, influenced by differences in their environments and demographic histories.

Historical cisco Coregonus artedi population collapses in Green Bay, Lake Michigan, and Saginaw Bay, Lake Huron, during the 1950s

AbstractCoregonus populations across their Holarctic range have often undergone unexplained collapses. Here, we document causes of collapse for two of the largest Coregonus populations in the world, cisco (C. artedi) in Green Bay, Lake Michigan, and Saginaw Bay, Lake Huron, during the 1950s. We used simulation models, rank‐order correlations, and historical literature to evaluate effects of overfishing, interactions with introduced rainbow smelt (Osmerus mordax), and overwinter bottom hypoxia on both cisco populations. Fully selected exploitation rates for cisco were alarmingly high (0.82–0.84), correlations and anecdotal evidence suggested negative interactions with rainbow smelt, and extensive areas of hypoxia coincident with cisco declines suggested incubation of cisco embryos was impaired regionally. Our findings suggested that negative effects of rainbow smelt were mainly responsible for the cisco population collapse in Green Bay and that overfishing and hypoxia had suppressed the Saginaw Bay cisco population before rainbow smelt caused its final collapse.

The origins and diversification of Holarctic brown bear populations inferred from genomes of past and present populations.

The brown bear (Ursus arctos) is one of the survivors of the Late Quaternary megafauna extinctions. However, despite being widely distributed across the Holarctic, brown bears have experienced extensive range reductions, and even extirpations in some geographical regions. Previous research efforts using genetic data have provided valuable insights into their evolutionary history. However, most studies have been limited to contemporary individuals or mitochondrial DNA, limiting insights into population processes that preceded the present. Here, we present genomic data from two Late Pleistocene brown bears from Honshu, Japan and eastern Siberia, and combine them with published contemporary and ancient genomes from across the Holarctic range of brown bears to investigate the evolutionary relationships among brown bear populations through time and space. By including genomic data from Late Pleistocene and Holocene individuals sampled outside the current distribution range, we uncover diversity not present in contemporary populations. Notably, although contemporary individuals display geographically structured populations most likely driven by isolation-by-distance, this pattern varies among the ancient samples across different regions. The inclusion of ancient brown bears in our analysis provides novel insights into the evolutionary history of brown bears and contributes to understanding the populations and diversity lost during the Late Quaternary.

Some features of the advent flora in Barnaul

In connection with the strengthening of human influence on vegetation, territories arose where species alien to the flora of the region appeared. Such places primarily include urban settlements. Long-term study of urban flora dynamics is of great importance and relevance. So, based on the data of V. I. Vereshchagin 30-50th XX century, a list of flora was compiled, which was further supplemented by data obtained as a result of the collection of herbarium during subsequent years to the present. From the general list of the Barnaul flora, a group of adventive (alien plants) was identified, which amounted to 211 species. Using the GIBF Global Database, the ranges of all adventitious species were determined. An absolute predominance of species with a cosmopolitan range was established. In somewhat smaller numbers, species with a Holarctic range were encountered. There are more than 90 % of such widely distributed species in the adventitious flora of Barnaul. Many cosmopolitans in a number of countries have become invasive; these are alien species whose entry and spread threaten ecosystems or native species and cause economic or environmental damage. There are 114 such cosmopolitans in the flora of Barnaul. Included in the Black Book of Siberia are 36 types of advents in Barnaul. Among them, species in Barnaul are dominated by origin associated with the northern hemisphere.

Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer

Typically much smaller in number than their mainland counterparts, island populations are ideal systems to investigate genetic threats to small populations. The Svalbard reindeer (Rangifer tarandus platyrhynchus) is an endemic subspecies that colonized the Svalbard archipelago ca. 6,000-8,000 years ago and now shows numerous physiological and morphological adaptations to its arctic habitat. Here, we report a de-novo chromosome-level assembly for Svalbard reindeer and analyze 133 reindeer genomes spanning Svalbard and most of the species' Holarctic range, to examine the genomic consequences of long-term isolation and small population size in this insular subspecies. Empirical data, demographic reconstructions, and forward simulations show that long-term isolation and high inbreeding levels may have facilitated the reduction of highly deleterious-and to a lesser extent, moderately deleterious-variation. Our study indicates that long-term reduced genetic diversity did not preclude local adaptation to the High Arctic, suggesting that even severely bottlenecked populations can retain evolutionary potential.

Ultraconserved elements improve resolution of marmot phylogeny and offer insights into biogeographic history

Marmots (Marmota spp.) comprise a lineage of large-bodied ground squirrels that diversified rapidly in the Pleistocene, when the planet quickly transitioned to a drier, colder, and highly seasonal climate—particularly at high latitudes. Fossil evidence indicates the genus spread from North America, across Beringia, and into the European Alps over the course of only a few million years, beginning in the late Pliocene. Marmots are highly adapted to survive long and severely cold winters, and this likely favored their expansion and diversification over this time period. Previous phylogenetic studies have identified two major subgenera of marmots, but the timing of important speciation events and some species relationships have been difficult to resolve. Here we use ultraconserved elements and mitogenomes, with samples from all 15 extant species, to more precisely retrace how and when marmots came to inhabit a vast Holarctic range. Our results indicate marmots arose in North America in the Early Miocene (∼16.3 Ma) and dispersed across the Bering Land Bridge in the Pliocene (∼3–4 Ma); in addition, our fossil-calibrated timeline is suggestive of the rise and spread of open grasslands as being particularly important to marmot diversification. The woodchuck (M. monax) and the Alaska marmot (M. broweri) are found to be more closely related to the Eurasian species than to the other North American species. Paraphyly is evident in the bobak marmot (M. bobak) and the hoary marmot (M. caligata), and in the case of the latter the data are highly suggestive of a second, cryptic species in the Cascade Mountains of Washington.

Gemmamyces piceae Bud Blight Damage in Norway Spruce (Picea abies) and Colorado Blue Spruce (Picea pungens) Forest Stands

Since 2008, spruce bud blight (Gemmamyces piceae (Borthw.) Casagr.) has been spreading epidemically in forest stands of the Czech Republic’s Ore Mountains. This fungus, with a disjunct Holarctic range, injures buds, especially of Colorado blue spruce (Picea pungens Engelm.). Damaged buds do not sprout, and, in case of a stronger attack, the tree does not recover its assimilation apparatus and may die. Within the past few years, there has been a huge spread of this fungus throughout the mountain range. This paper summarizes the biology of G. piceae, its host plants, and presents the first findings from the massive outbreak of G. piceae. In 2015, an increase in damage was detected on Norway spruce (Picea abies (L.) Karst). The course of the G. piceae epidemic had been monitored in 25 permanent research plots over the course of 11 years. In the case of Colorado blue spruce, stands aged 10–60 years were attacked, with 60% of buds damaged on average. The intensity of damage to Norway spruce buds was around 25%. Norway spruce infestation varied significantly depending upon the age of the stand (GLMM: p < 0.01). In the age class of 31–60 years, on average 80% of individuals were infested. In older stands, only 42% of trees were infested, and no infestation was found in individuals younger than 15 years. In Colorado blue spruce, the distribution of the pathogen was continuous, whereby all individuals in the research plots were affected, and, with the exception of a few trees, the infestation was lethal or resulted in a significant reduction of the assimilation apparatus. The development of damage on Colorado blue spruce can be characterized as continuous growth.

Geographical distribution of Satyridae (Lepidoptera, Satyridae) of the Kurgan Oblast

An analysis of available literary sources showed that the main studies on the study of the species composition of butterflies of the Kurgan Oblast were carried out in the second half of the 20th century. According to literary data, the fauna of the Lepidoptera family Satyridae of the Kurgan Oblast is represented by 24 species. Conducted in 2000-2002 and 2014-2019 in the forest-steppe zone, their own collections and revision of the collection of Kurgan State University confirmed the data of literary sources. Of the 24 satirids species found in the Kurgan Oblast, the Holarctic range is characteristic of only one - C. tullia. The ranges of other species belong to the Palearctic group. Thus, the fauna of the satirids of the Kurgan Oblast by 96% consists of Palearctic species. Of the 23 satirids species with Palearctic ranges, 6 species (L. achine, C. glycerion, C. hero, E. ligea, A. hyperantus, M. dryas) are characterized by a trans-Eurasian temperate-subtropical range, 1 species (L. petropolitana) is assigned to the trans-Eurasian temperate type of the range, 3 (L. maera, C. pamphilus, M. jurtina) have western-central palearctic temperate-subtropical ranges, Euro-Siberian-Central Asian temperate-subtropical range has only 1 species (O. tarpeja), 1 species (E. medusa) is assigned to Euro-Siberian-Central Asian type of range, 8 (C. leander, H. lycaon, H. lupina, P. afra, A. arethusa, C. briseis, C. persephone, M. russiae) have Euro-Kazakhstan temperate-subtropical ranges, 1 species (E. aethiops) is characterized by a Euro-Baikal temperate-subtropical range, the Euro-Baikal subboreal range has 1 species (H. autonoe), the Western Palearctic range is characterized by 1 species (C. arcania). Thus, the fauna of the satirids of the Kurgan region by 96% consists of Palearctic species.

Comparative phylogeography uncovers evolutionary past of Holarctic dragonflies

Here, we investigate the evolutionary history of five northern dragonfly species to evaluate what role the last glaciation period may have played in their current distributions. We look at the population structure and estimate divergence times for populations of the following species: Aeshna juncea (Linnaeus), Aeshna subarctica Walker, Sympetrum danae (Sulzer), Libellula quadrimaculata Linnaeus and Somatochlora sahlbergi Trybom across their Holarctic range. Our results suggest a common phylogeographic pattern across all species except for S. sahlbergi. First, we find that North American and European populations are genetically distinct and have perhaps been separated for more than 400,000 years. Second, our data suggests that, based on genetics, populations from the Greater Beringian region (Beringia, Japan and China) have haplotypes that cluster with North America or Europe depending on the species rather than having a shared geographic affinity. This is perhaps a result of fluctuating sea levels and ice sheet coverage during the Quaternary period that influenced dispersal routes and refugia. Indeed, glacial Beringia may have been as much a transit zone as a refugia for dragonflies. Somatochlora sahlbergi shows no genetic variation across its range and therefore does not share the geographic patterns found in the other circumboreal dragonflies studied here. Lastly, we discuss the taxonomic status of Sympetrum danae, which our results indicate is a species complex comprising two species, one found in Eurasia through Beringia, and the other in North America east and south of Beringia. Through this study we present a shared history among different species from different families of dragonflies, which are influenced by the climatic fluctuations of the past.

Chaoborus flavicans Meigen (Diptera, Chaoboridae) is a complex of lake and pond dwelling species: a revision.

Chaoborus flavicans (Meigen) is a widespread and much studied lacustrine phantom midge. As larvae, these insects are important aquatic predators. Based on the available type material, morphology of immature stages and adults, their aquatic habitat, and DNA barcodes, C. flavicans is shown to be a composite of at least four species, with three of these named here. Chaoborus flavicans is primarily a lake-dwelling species with a Holarctic range. Chaoborus albipes (Johannsen, 1903 stat. rev.) and C. posio Salmela sp. n. are pond-dwelling Holarctic and north European species, respectively. The position of the larval subordinate mandibular tooth at the vertex of the second and fourth teeth is a synapomorphy of the Chaoborus flavicans species complex. We present an identification key to fourth instar larvae, pupae, and adult males. We also designate the lectotype and paralectotypes of Sayomyia rotundifolia Felt, 1904 (syn. nov. of C. albipes). We hypothesize that a fourth species of the species complex is present in Japan. Our revision indicates that Holarctic shallow ponds contain a hidden diversity of predators (C. albipes and C. posio sp. n.).

Extrinsically reinforced hybrid speciation within Holarctic ermine (Mustela spp.) produces an insular endemic

AbstractAimRefugial isolation during glaciation is an established driver of speciation; however, the opposing role of interglacial population expansion, secondary contact, and gene flow on the diversification process remains less understood. The consequences of glacial cycling on diversity are complex and especially so for archipelago species, which experience dramatic fluctuations in connectivity in response to both lower sea levels during glacial events and increased fragmentation during glacial recession. We test whether extended refugial isolation has led to the divergence of genetically and morphologically distinct species within Holarctic ermine (Mustela erminea), a small cosmopolitan carnivore species that harbours 34 extant subspecies, 14 of which are insular endemics.LocationHolarctic.MethodsWe use genetic sequences (complete mitochondrial genomes, four nuclear genes) from >100 ermine (stoats) and geometric morphometric data for >200 individuals (27 of the 34 extant subspecies) from across their Holarctic range to provide an integrative perspective on diversification and endemism across this complex landscape. Multiple species delimitation methods (iBPP, bPTP) assessed congruence between morphometric and genetic data.ResultsOur results support the recognition of at least three species within the M. erminea complex, coincident with three of four genetic clades, tied to diversification in separate glacial refugia. We found substantial geographic variation within each species, with geometric morphometric results largely consistent with historical infraspecific taxonomy.Main conclusionsPhylogeographic structure mirrors patterns of diversification in other Holarctic species, with a major Nearctic‐Palearctic split, but with greater intraspecific morphological diversity. Recognition of insular endemic species M. haidarum is consistent with a deep history of refugial persistence and highlights the urgency of mindful management of island populations along North America's North Pacific Coast. Significant environmental modification (e.g. industrial‐scale logging, mining) has been proposed for a number of these islands, which may elevate the risk of extinction of insular palaeoendemics.

Distance sampling vs. plot sampling for monitoring population abundances of the Pyrenean rock ptarmigan

The rock ptarmigan (Lagopus muta) has a wide Holarctic geographical range, within which its status changes locally from threatened to abundant. For the correct management of populations under differing scenarios, accurate and precise estimates of bird abundances and/or densities are required. We used geolocated datasets from 56 counts of singing males carried out in 2003–2017 to estimate the density of Pyrenean rock ptarmigans (Lagopus muta pyrenaica). We analysed these datasets using two methodologies: (1) a plot sampling (PS) approach with two effective detection ranges (EDR) of 250 m and 350 m and (2) a conventional distance sampling (DS) approach. Our results showed that the density estimates obtained by DS were more precise and 30–87% higher than those obtained by PS using 250 m and 350 m EDR. Monitoring with PS underestimates populations and is less precise than DS; this bias is magnified when high EDR values are used. The monitoring of the Pyrenean rock ptarmigan could be significantly improved with greater use of the DS method.

Strong population structure and limited gene flow between Yellow-billed Ducks and Mallards in southern Africa

AbstractSecondary contact and hybridization between recently diverged taxa have been increasing due to anthropogenic changes to the environment. Determining whether secondary contact leads to gene flow between species is important for understanding both the evolutionary consequences of such events (i.e. genetic swamping, speciation reversal, hybrid speciation) and for establishing proper conservation measures. Mallards (Anas platyrhynchos), which natively have a Holarctic distribution, have been introduced nearly worldwide due to game-farm and domestic pet releases. Their expanding range has resulted in secondary contact and increased incidences of hybridization with many closely related Mallard-like ducks that comprise the Mallard complex. Here, we assay molecular diversity for 19 nuclear introns and the mitochondrial DNA for wild Mallards (n = 50) across their Holarctic range and Yellow-billed Ducks (n = 30–75; Anas undulata) from southern Africa to determine population genetic structure and test for evidence of Mallard introgression into Yellow-billed Ducks. While we found limited support for contemporary gene flow across nuclear markers, we provide evidence from mitochondrial DNA that best supports ancient gene flow between Yellow-billed Ducks and Mallards. Yellow-billed Ducks best fit a single population at nuclear markers but show some location-specific mtDNA structure that suggests recent founder or bottleneck events. Although we find that introgression from Mallards into Yellow-billed Duck is limited, Yellow-billed Duck populations should be monitored to determine if expanding feral Mallard populations in southern Africa are increasing introgression.

Worldwide distribution and theoretical spreading of Trichoferus campestris (Coleoptera: Cerambycidae) depending on the main climatic elements

AbstractThe velvet longhorned beetle, Trichoferus campestris (Coleoptera: Cerambycidae) is a serious wood‐boring pest that is a major threat to the phytosanitary condition of forests and orchards. Its worldwide expansion is a major concern for plant health. We have collected all bibliographical references, phytosanitary reports and authentic photographic evidence from entomological websites to determine the worldwide distribution of T. campestris. The theoretical directions of the spreading and actually occupied area of this arthropod pest were determined over the whole Holarctic range. Furthermore, the potential distribution area was calculated using cumulated temperature in the growing season averaged over 15 years both in the Palearctic and Nearctic regions. Holarctic expansion of the species, including the main parts of North America and Eurasia, is clearly indicated. Its populations occur in 29 countries to date, supported by documentation from 64 publications and 30 online forums. Its spread is continuously westward in the Palearctic; in the Nearctic, the spread was first southward from the Great Lakes region then eastward from Utah. The species has excellently adapted to circumstances of freight by ship and plane, as wood is often used, ensuring optimal conditions for the pest. In addition, the active spreading achieved by flying is an important factor contributing to its expansion. The primary criterion for controlling the species would be the introduction of a monitoring system in affected and exposed areas.

On the hypothesis of dioicous – monoicous species pairs in the Mniaceae (Bryophyta); morphology, sexual condition and distiribution

AbstractSome early observations seemed to show that, in the Mniaceae, the doubling of the chromo-some set affects a change from dioicous to monoicous condition, larger size of the gametophyte including larger leaf cell size, and to a wider range of the monoicous counterpart. The Mniaceae taxa are divided into four groups based on their sexual condition and morphology. 1. Dioicous – monoicous counterparts which can be distinguished by morphological characters, 2. Dioicous – monoicous taxa which have no morphological, deviating characters, 3. Monoicous species mostly with diploid chromosome number for which no dioicous counterpart is known, and 4. The taxa in Mniaceae with only dioicous plants. Most of the monoicous species of the Mniaceae have wide ranges, but a few of them are endemics in geographically isolated areas. The dioicous species have either a wide holarctic range or a limited range in the forested areas of temperate and meridional North America, Europe and SE Asia, or in subtropical Asia. Some of the monoicous species are evidently autodiploids and a few of them are allopolyploids from cross-sections of two species. Quite recently, several new possible dioicous – monoicous relationships have been discovered.

Towards a phylogeny ofCyclops(Copepoda): (in)congruences among morphology, molecules and zoogeography

AbstractThe phylogeny ofCyclops(~30 spp.), a predominantly Palearctic cold‐adapted genus, was reconstructed based on morphological and molecular characters. The morphological analysis used extensive taxon sampling from the entire Holarctic range of the genus and included 53 morphological characters. Polymorphic traits were coded by the “unordered,” “unscaled” and “scaled” methods; maximum parsimony criterion was applied in tree building. Molecular phylogenetic reconstructions utilized partial nuclear 18S and 28S ribosomal genes, mitochondrial cytochrome oxidase I and complete internal transcribed spacer regions I and II, albeit with limited taxon sampling. Bayesian inference and maximum likelihood were used in these tree reconstructions. The molecular characters were used both in combination with morphology and as an independent test of the basal relationships inferred from morphology. Monophyly of the genus received strong support in both the morphological and molecular phylogenies; the basal relationships remain unresolved. The morphology‐based phylogenies, along with the geographic distribution patterns and ecological traits, supported monophyly of theankyrae−ladakanusclade,scutifer‐clade (C. scutifer,C. jashnovi,C. columbianus),kolensis‐clade (C. kolensis,C. kikuchii,C. vicinus,C. furcifer,C. insignis,C. alaskaensis),abyssorum‐clade (C. abyssorums. str.,C. abyssorum larianus,C. ricae,C. sevani) anddivergens‐clade (South Carpathian “Cyclopssp. Y,”C. mauritaniae,C. divergens,C. bohater,C. lacustris). Relationships among European and North American populations ofC. scutiferandC. columbianusbased on partial sequences of the 12S mitochondrial gene showC. scutiferto be paraphyletic, suggesting two independent invasions into North America via the Bering Land Bridge from Siberia to Alaska.

Does Calypogeia azurea (Calypogeiaceae, Marchantiophyta) occur outside Europe? Molecular and morphological evidence.

Oil bodies are the unique feature of most liverworts. Their shape, color and distribution pattern in leaf and underleaf cells are important taxonomic features of the genus Calypogeia. Most species of the genus Calypogeia have pellucid and colorless oil bodies, whereas colored, including gray to pale brown, purple-brown or blue oil bodies, are rare. To date, C. azurea was the only species with blue oil bodies to have been considered as a species of the Holarctic range. This species has been noted in various parts of the northern hemisphere–from North America, through Europe to the Far East. The aim of this study was to determine the genetic diversity of C. azurea from different parts of its distribution range and to ascertain whether blue oil bodies appeared once or several times in the evolution of the genus Calypogeia. The phylogenetic analyses based on four plastid regions (rbcL, trnG, trnL, trnH-psbA) and one nuclear region (ITS2) revealed that C. azurea is presently a paraphyletic taxon, with other Calypogeia species nested among C. azurea accessions that were clustered into four different clades. Based on the level of genetic divergence (1.03–2.17%) and the observed morphological, ecological and geographical differences, the evaluated clades could be regarded as previously unrecognized species. Four species were identified: C. azurea Stotler & Crotz (a European species corresponding to the holotype), two new species from Pacific Asia—C. orientalis Buczkowska & Bakalin and C. sinensis Bakalin & Buczkowska, and a North American species which, due to the lack of identifiable morphological features, must be regarded as the cryptic species of C. azurea with a provisional name of C. azurea species NA.

The evolutionary and phylogeographic history of woolly mammoths: a comprehensive mitogenomic analysis

Near the end of the Pleistocene epoch, populations of the woolly mammoth (Mammuthus primigenius) were distributed across parts of three continents, from western Europe and northern Asia through Beringia to the Atlantic seaboard of North America. Nonetheless, questions about the connectivity and temporal continuity of mammoth populations and species remain unanswered. We use a combination of targeted enrichment and high-throughput sequencing to assemble and interpret a data set of 143 mammoth mitochondrial genomes, sampled from fossils recovered from across their Holarctic range. Our dataset includes 54 previously unpublished mitochondrial genomes and significantly increases the coverage of the Eurasian range of the species. The resulting global phylogeny confirms that the Late Pleistocene mammoth population comprised three distinct mitochondrial lineages that began to diverge ~1.0–2.0 million years ago (Ma). We also find that mammoth mitochondrial lineages were strongly geographically partitioned throughout the Pleistocene. In combination, our genetic results and the pattern of morphological variation in time and space suggest that male-mediated gene flow, rather than large-scale dispersals, was important in the Pleistocene evolutionary history of mammoths.

The status of the freshwater pearl mussel Margaritifera margaritifera in Scotland: extent of change since 1990s, threats and management implications

All known rivers in Scotland with recent records of freshwater pearl mussels Margaritifera margaritifera were surveyed in 2013–2015 using a standard methodology. Freshwater pearl mussel populations were classed as: (i) apparently extinct in 11 rivers, (ii) not successfully recruiting in 44 rivers, and (iii) evidence of recent successful recruitment in 71 rivers. On a regional basis, a high proportion of extant populations were located in North and West Scotland. In all regions extant populations were characterised by low pearl mussel densities, with 97 of 115 extant Scottish populations defined as ‘rare’ (0.1–0.9 mussels per 1 m 2) or ‘scarce’ (1.0–9.9 mussels per 1 m 2). Only 18 Scottish rivers now hold pearl mussel populations in densities that are considered to be ‘common’ (10–19.9 mussels per 1 m 2) or ‘abundant’ (>20 mussels per 1 m 2). Based on survey evidence, the number of apparently extinct pearl mussel populations in Scottish rivers is now 73. The decline is particularly pronounced in the West Highlands and Western Isles strongholds. The key threats are: (i) pearl fishing, (ii) low host fish densities, (iii) pollution/water quality, (iv) climate change and habitat loss, (v) hydrological management/river engineering and (vi) ‘other factors’, such as non-native invasive species. Over the last 100 years this endangered species has been lost from much of its former Holarctic range. Scotland’s extant M. margaritifera populations continue to be of international importance, but their continued decline since the first national survey in 1998 is of great concern.

Electrofishing as a new method to search for unknown populations of the endangered freshwater pearl mussel Margaritifera margaritifera

Abstract1. The freshwater pearl mussel Margaritifera margaritifera is threatened throughout its Holarctic range, but the occurrence of this species is insufficiently mapped. For the conservation of M. margaritifera, it is important to identify populations more comprehensively.2. Traditionally mussels have been searched for visually using techniques such as diving and aquascope, both of which are potentially time‐consuming and demanding survey methods.3. In this study, a new search method is presented. As glochidia of M. margaritifera are larval parasites on the gills of salmonid fish, electrofishing and non‐destructive examination of salmonids with the naked eye may reveal the presence of glochidia and therefore the occurrence of M. margaritifera in watercourses. This method was tested in both the field and laboratory in northern Finland.4. In summer, when M. margaritifera glochidia were large, the status of salmonids being infected or uninfected by M. margaritifera was correctly identified with the naked eye with 62, 80, 88 and 93% accuracy in four streams sampled, 96% accuracy in the laboratory, and 100% accuracy in all cases when at least 20 glochidia per fish were present. Intensity of infection was also assessed successfully; a specifically tailored, qualitative abundance score correlated significantly with the real number of glochidia. However, during autumn with small glochidia freshly attached to fish, glochidia infection could be observed only under microscopic examination.5. When the method was used in 40 previously incompletely surveyed tributaries, three M. margaritifera populations were found. The infection in salmonids was observed always with the naked eye, being subsequently confirmed microscopically. The existence of adult mussels in two of these rivers was also confirmed.6. The results indicate that electrofishing and a relatively quick naked‐eye check of salmonids provides a new, non‐destructive, and potentially cost‐effective way to search for new, previously unrecorded M. margaritifera populations. Copyright © 2016 John Wiley & Sons, Ltd.