Higher Soil pH Research Articles

Influence of Application Timing and Cultivar on Soybean Tolerance and Weed Control from Diflufenican or a Diflufenican-Containing Premixture

Abstract Bayer CropScience anticipates launching several premixtures for use in soybean, targeted at control of Palmer amaranth. One of the premixtures will contain diflufenican (WSSA Group 12), metribuzin (Group 5), and flufenacet (Group 15) (DFF-containing premixture), offering an alternative site of action for soybean producers. Field experiments were conducted in Arkansas and Michigan to evaluate application timings of the DFF-containing premixture for soybean tolerance and weed control and possible cultivar tolerance differences to diflufenican and the DFF-containing premixture. Soybean injury from the 1X and 2X rates of the DFF-containing premixture ranged from 0% to 60% 14 d after planting (DAP), with injury increasing the closer the herbicide was applied to soybean emergence. Excluding the 2X rate applied 3 DAP in Arkansas in 2023, soybean injury was <20% regardless of location, site year, application timing, and rate. For weed control experiments, only a 1X rate of the DFF-containing premixture was applied at the various application timings. Control of five weed species, encompassing broadleaves and grasses, ranged from 81% to 98%, regardless of application timing by 28 DAP. By 42 DAP, weed control ranged from 71% to 97%, with the 14-d preplant application timing typically being the least effective. The DFF-containing premixture and diflufenican alone were applied PRE at 1X and 2X rates for the soybean cultivar study. Soybean metribuzin sensitivity did not affect the degree of crop response, even on a high pH soil, and injury to soybean never exceeded 20%. Overall, the DFF-containing premixture will be a tool that soybean producers can integrate into a season-long herbicide program for use across the United States regardless of the soybean cultivar.

Zinc outperforms other foliar fertilisers in enhancing lentil yield and harvest index in semi-arid regions

ABSTRACT Lentil yield in semi-arid regions is limited by heat, drought stress and nutrient deficiencies induced by high soil pH and water scarcity. In this study, we investigated the effect of foliar fertiliser treatments on lentil yield and yield components in a semi-arid region of South-East Anatolia, Türkiye. The control treatment and six foliar treatments were as follows: (i) Control: non-amended control, (ii) Zn: zinc sulphate, (iii) K: potassium sulphate, (iv) Zn + K (zinc sulphate + potassium sulphate), (v) Flo: Florea-UPL (containing boron and molybdenum), (vi) Mac: Macarena-UPL, an organomineral foliar fertiliser and (vii) Flo + Mac. Foliar fertilisers were applied at the first blooming stage of field-grown lentils. Total biomass yield was largely unaffected across treatments except in the K treatment. However, foliar Zn supply was the only treatment that significantly increased grain yield (55% higher), harvest index and total grain N uptake compared to the control, likely due to enhanced translocation of nitrogen-containing assimilates. SPAD values and total N analysis showed that stover N content depleted more rapidly in the Zn treatment than in other treatments during the grain-filling phase. The tested commercial products slightly increased SPAD values, biomass and grain yield. Among the treatments, Zn, as a foliar fertiliser, was the most cost-effective solution for improving grain yield in this region.

Growth and acclimation dynamics in reintroduced Erioderma pedicellatum (Hue) P.M.Jørg., a critically endangered cyanolichen in boreal rainforest

This study focuses on the critically endangered Erioderma pedicellatum, a sexually reproducing cyanolichen. The species’ decline is primarily attributed to habitat loss and extinction debts. The aim is to understand the possibilities of reintroduction via transplantation on Picea abies (L.) H.Karst. and gain insights into the species' growth response to environmental gradients in its boreal rainforest habitat. The source population of E. pedicellatum found on open, sun-exposed spruce branches within a waterfall spray zone, underwent a significant environmental shift when transplanted to the rainforest. The shift induced shade acclimation, which was marked by an increased maximal photosystem II efficiency (FV/FM), reduced thallus thickness and reduced apparent electron transport rate (ETRapp). However, stochastic fragmentation impacted 57 % of thalli, causing significant losses, particularly in sections with numerous apothecia, suggesting a trade-off between growth and reproduction. Unfragmented thalli with positive relative growth rate (RGR) exhibited increased growth correlated with base cation availability (high soil and bark pH) and light availability. Thalli that were already shade-adapted at the start (low ETRapp at high light) displayed the fastest growth in the rainforest. The best subset regression model of unfragmented thalli accounted for 72.8 % of the variation in RGR. The reintroduction of E. pedicellatum into the boreal rainforest is possible, but challenging, given that well-lit spruce branches with high base cation availability in humid canopy layers are rare.

Nitrification inhibitor effect on manganese and phosphorus shoot concentrations in maize under different textured soils from northern Germany

High soil pH can result in Mn2+ and P deficiency, leading to crop yield losses. Therefore, supplying soil with NH4+-N fertilizer in stabilized or unstabilized form can increase soil Mn2+ availability and shoot concentration. Nitrification inhibitors (NIs) have been proposed to lower rhizosphere soil pH, thus improving plant P uptake and preventing P deficiency in soils with high pH. Thus, this study investigated whether NI-stabilized or unstabilized NH4+-N could increase Mn2+ availability in three differently-textured soils (sand, loamy sand, and silt loam) and promote Mn2+ and P shoot concentration in maize. Two greenhouse experiments were conducted to investigate the effects of applying NH4+-N fertilizer with or without the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) combined with different nitrogen (N) sources (calcium nitrate (CN), ammonium nitrate (AN), and ammonium sulphate (AS)). The measured variables were bulk and rhizosphere soil pH and Mn2+ availability, maize biomass, as well as Mn2+ and P shoot concentrations. The results indicated that DMPP-stabilized AS significantly decreased rhizosphere pH by 7.2 % in loamy sand soil texture compared with unstabilized AS. Similarly, only in the loamy sand texture, DMPP-stabilized AS increased Mn2+ availability and shoot concentration by 86 % and 47 %, respectively, relative to unstabilized AS. Furthermore, DMPP-treated AS and AN promoted P shoot concentration by 30 % and 21 % in the loamy sand and silt loam soil textures, respectively, relative to the corresponding N sources without DMPP. Conversely, DMPP did not impact the investigated variables in the sand texture for all N sources. Moreover, AN and AS increased biomass yield, Mn2+ availability, and shoot concentration by 72 %, 30 %, and 46 %, respectively, in relation to the CN fertilizer in the sand soil texture. In conclusion, this study confirmed the effectiveness of DMPP-induced rhizosphere acidification in enhancing Mn2+ and P shoot concentration in loamy sand soil textures, as well as P shoot concentration in fine-textured soil.

Analysis of Mycorrhization Trends and Undesired Fungi Species in Three- and Six-Year-Old Tuber aestivum Plantations in Hungary.

Tuber aestivum is a key truffle species with significant ecological and economic value. Despite its importance, plantation success can be influenced by soil pH, host plants, and undesired fungi. This study examines how soil pH and host plants influence mycorrhization trends in T. aestivum plantations across six plant species in eight Hungarian settlements, using root sampling and DNA analysis to assess plantations at three and six years of age. Tuber aestivum achieved over 30% mycorrhization, with Carpinus betulus showing the highest levels. DNA analysis identified eight undesired mycorrhizal fungi, with Suillus spp. (42.9%) and Scleroderma spp. (31.4%) being the most prevalent. The study found that T. aestivum preferred a soil pH of around 7.6, while undesired fungi thrived in slightly acidic conditions. Additionally, soil pH significantly and positively influenced T. aestivum mycorrhization; however, factors such as plantation age also contributed to mycorrhization trends. While mycorrhization by undesired fungi decreased with higher soil pH, it increased as plantations matured from three to six years. These findings highlight the need for the effective management of soil pH and the control of undesired fungi to optimize T. aestivum mycorrhization, emphasizing the importance of targeted strategies and further research for sustainable truffle cultivation.

Bio sulfur granules developed with Methylobacterium thiocyanatum promoted black gram growth and yield in sulfur-deficient calcareous vertisol.

High soil pH and excess CaCO3 are major contributors to calcareous soil limitations on crops' access to essential nutrients, especially phosphorus (P) and micronutrients, which in turn impact pulses yields and growth. The purpose of this study was to determine the effect of bio sulfur granules (BSG) on the growth of black gram and the availability of nutrients in calcareous vertisols deficient in sulfur. BSG was developed by using sulfur-oxidizing bacteria (SOB) and elemental sulfur (ES) through an incubation study. Developed BSG was tested in a pot and field conditions to evaluate their effectiveness on black gram growth and yield. In the incubation study, soil treated with Methylobacterium thiocyanatum VRI7-A4 and ES (40kg S/ha) significantly decreased pH and increased available S (SO42-) in calcareous soils. After 40days of incubation, the solubility of P, Fe, and Zn was greatly increased by the addition of ES @ 40kg S/ ha in combination with M. thiocyanatum VRI7-A4 or Pandoraea thiooxydans ATSB16. Black gram in S-deficient calcareous soil was improved by the application of BSG (ES @ 40kg S/ ha with M. thiocyanatum VRI7-A7) in terms of root and shoot lengths, nodule number, plant biomass, pod yield, and biological yield as compared to control. The same treatment greatly increased plant nutrient intake as well as the concentrations of P, Fe, and Zn in the soil. The results showed that the addition of BSG granules (ES @ 40kg S/ha + M. thiocyanatum VRI7-A4) to calcareous vertisol deficient in S enhanced the nutrient solubility through S oxidation. The developed bio sulfur granules may be added to the fertilizer schedule of the pulses growers to get improved crop growth and yield of black gram in calcareous soil.

Recovery of Soil Microbial Metabolism After Rewetting Depends on Interacting Environmental Conditions and Changes in Functional Groups and Life History Strategies.

Climate change is causing an intensification of soil drying and rewetting events, altering microbial functioning and potentially destabilizing soil organic carbon. After rewetting, changes in microbial community carbon use efficiency (CUE), investment in life history strategies, and fungal to bacterial dominance co-occur. Still, we have yet to generalize what drives these dynamic responses. Here, we collated 123 time series of microbial community growth (G, sum of fungal and bacterial growth, evaluated by leucine and acetate incorporation, respectively) and respiration (R) after rewetting and calculated CUE = G/(G + R). First, we characterized CUE recovery by two metrics: maximum CUE and time to maximum CUE. Second, we translated microbial growth and respiration data into microbial investments in life history strategies (high yield (Y), resource acquisition (A), and stress tolerance (S)). Third, we characterized the temporal change in fungal to bacterial dominance. Finally, the metrics describing the CUE recovery, investment in life history strategies, and fungal to bacterial dominance after rewetting were explained by environmental factors and microbial properties. CUE increased after rewetting as fungal dominance declined, but the maximum CUE was explained by the CUE under moist conditions, rather than specific environmental factors. In contrast, higher soil pH and carbon availability accelerated the decline of microbial investment in stress tolerance and fungal dominance. We conclude that microbial CUE recovery is mostly driven by the shifting microbial community composition and the metabolic capacity of the community, whereas changes in microbial investment in life history strategies and fungal versus bacterial dominance depend on soil pH and carbon availability.

Low soil pH enhances fruit acidity by inhibiting citric acid degradation in lemon (Citrus lemon L.)

Fruit acidity significantly influences fruit flavor, but the specific impact of soil pH on fruit acidity remains unclear. This study investigated the effects of various soil pH levels on fruit acidity and citric acid (CA) metabolism in lemon (Citrus limon L.). High soil pH (pH 8) decreased total soluble solids concentrations in lemon fruits, while low soil pH (pH 4) increased titratable acid and CA concentrations. Although low soil pH reduced the synthesis of CA due to the decreased citrate synthase and phosphoenolpyruvate carboxylase activities, the elevated fruit acidity under low soil pH conditions is not directly related to CA synthesis. Instead, low soil pH was found to suppress the activity of cytosolic aconitase (Cyt-ACO), an iron-dependent enzyme, indicating a potential role for CA degradation inhibition in low soil pH-induced CA accumulation. Furthermore, low soil pH significantly reduced cytosolic iron (Cyt-Fe) concentration, which was positively correlated with Cyt-ACO activity. In conclusion, low soil pH contributes to increasing fruit acidity in lemon, partially by inhibiting CA degradation due to the reduced Cyt-Fe concentrations. Our work unravels the influence of soil pH on CA accumulation and provides important clues for modulating CA levels through microelement fertilization in citrus.

The impact of water hyacinth biochar on maize growth and soil properties: The influence of pyrolysis temperature

AbstractIntroductionOptions for managing water hyacinths (WHs) include converting the biomass into biochar for soil amendment. However, less has been known about the impact of WH‐based biochar developed in varying pyrolysis temperatures on plant growth and soil qualities.Materials and MethodsA pot experiment was undertaken in a factorial combination of WH biochars (WHBs) developed at three temperatures (350°C, 550°C and 750°C) and two application rates (5 and 20 t ha−1), plus a control without biochar. Maize was grown as a test crop for 2 months under natural conditions.ResultsOur study showed that applying WHB developed between 350°C and 750°C at 20 t ha−1 increased maize shoot and root dry biomass by 47.7% to 17.6% and 78.4% to 54.1%, respectively. Nevertheless, raising the biochar pyrolysis temperature decreased maize growth, whereas increasing the application rate displayed a positive effect. The application of WHB generated at 350°C and 550°C at 20 t ha−1 resulted in significant improvements in soil total nitrogen (17.9% to 25%), cation exchange capacity (27.3% to 20.2%), and ammonium‐nitrogen (60.7% to 59.6%), respectively, over the control. Additionally, applying WHB produced from 350°C to 750°C at 20 t ha−1 enhanced soil carbon by 38.5%–56.3%, compared to the control. Conversely, applying biochar produced at 750°C resulted in higher soil pH (6.3 ± 0.103), electrical conductivity (0.23 ± 0.01 dS m−1) and available phosphorus (21.8 ± 2.53 mg kg−1).ConclusionWHBs developed at temperatures of 350°C and 550°C with an application rate of 20 t ha−1 were found to be optimal for growing maize and improving soil characteristics. Our study concludes that pyrolysis temperature significantly governs the effectiveness of biochar produced from a specific biomass source.

Effects of vermicompost and mineral fertilizers on soil properties, malt barley (Hordeum distichum L.) yield, and economic benefits

AbstractSoil fertility depletion has significantly reduced the yields of various crops in Ethiopia, mainly the yield of malt barley in the district. To address this issue, integrated applications of vermicompost and mineral nitrogen (N) fertilizers were tested. Therefore, this study aimed to evaluate the effects of vermicompost and mineral nitrogen fertilizers application on malt barley yield (Hordeum distichum L.), soil properties, and economic benefits. The experiment was arranged in a randomized complete block design with three replications. The treatments were nine in various combinations of vermicompost (VC) and N fertilizer (N): (69 kg N; 0.79 t VC + 58.65 kg N; 1.59 t VC + 48.30 kg N; 2.39 t VC + 37.95 kg N; 3.19 t VC + 27.60 kg N; 3.98 t VC + 17.25 kg N; 4.78 t VC + 6.90 kg N; 5.31 t VC ha−1 and control). The highest soil pH was recorded by applying 5.31 t of vermicompost ha−1 alone. The highest total nitrogen (0.34%), available phosphorus (15.58 mg kg−1), grain yield (4950 kg ha−1), and net benefit (4255.74 USD) were recorded from the application of 2.39 t VC plus 37.95 kg N, while the highest soil organic carbon (3.38%) and cation exchange capacity (26.17 cmol (+) kg−1) were recorded from 3.19 t VC plus 27.60 kg N ha−1 compared to the control. This study concludes that applying 2.39 t VC and 37.95 kg N ha−1 in combination improves soil fertility, malt barley yield, and economic benefits for smallholder farmers in the study district and adopts this in similar soil types and agroecologies.

Enhancing Abiotic Stress Tolerance in Fruit Trees Using Microbial Biostimulants

Global climate change has significantly reduced the yield of many crops due to various abiotic stressors. These stressors include water-related issues such as drought and flooding, thermal changes like extremely low and high temperatures, salinity, and adverse soil pH conditions including alkalinity and acidity. Biostimulants have emerged as promising and effective tools for mitigating the damage caused by these abiotic stressors in plants, ultimately enhancing both the quantity and quality of crops. Biostimulants are naturally derived substances that include humic acid, protein hydrolysates, nitrogenous compounds, seaweed extracts, beneficial bacteria, and molds. Even at low concentrations, biostimulants play a critical role in activating important plant enzymes, inducing antioxidant defenses, improving water relations and photosynthetic activity, stimulating hormone-like activities (particularly auxins, gibberellins, and cytokinins), and modulating root system development. This review discusses the physiological effects of microbial biostimulants on the quality and productivity of fruit crops, as well as their experimental applications.

Unlocking Zn biofortification: leveraging high-Zn wheat and rhizospheric microbiome interactions in high-pH soils

Unlocking Zn biofortification: leveraging high-Zn wheat and rhizospheric microbiome interactions in high-pH soils

Copper contribution to rice production and greenhouse gas emissions in hydrophobic peat soil

Abstract Harnessing the potential of hydrophobic peat for rice cultivation through effective amelioration and fertilization such as the application of copper (Cu) fertilizer. A greenhouse experiment was conducted, employing a treatment of Cu fertilizer at a rate of 5 kg/ha. The objective of this study was to determine the contribution of Cu in rice production and influencing of greenhouse gas emissions. N P K fertilizers were applied as basal fertilizers according to the recommended dosage for rice crops. The research findings revealed that the application of Cu fertilizer increased the dry grain weight per tiller by 14.2%. This application also resulted in higher soil pH and increased Cu concentrations in plant tissue above critical levels. The study also showed that the Cu application contributed to the increased concentrations of CO2 and CH4, although these differences were not statistically significant when compared to treatments without Cu application. The study implies that copper (Cu) is an essential micronutrient crucial for the growth and development of rice plants, especially in hydrophobic peat soil.

Iron Chelation in Soil: Scalable Biotechnology for Accelerating Carbon Dioxide Removal by Enhanced Rock Weathering.

Enhanced rock weathering (EW) is an emerging atmospheric carbon dioxide removal (CDR) strategy being scaled up by the commercial sector. Here, we combine multiomics analyses of belowground microbiomes, laboratory-based dissolution studies, and incubation investigations of soils from field EW trials to build the case for manipulating iron chelators in soil to increase EW efficiency and lower costs. Microbial siderophores are high-affinity, highly selective iron (Fe) chelators that enhance the uptake of Fe from soil minerals into cells. Applying RNA-seq metatranscriptomics and shotgun metagenomics to soils and basalt grains from EW field trials revealed that microbial communities on basalt grains significantly upregulate siderophore biosynthesis gene expression relative to microbiomes of the surrounding soil. Separate in vitro laboratory incubation studies showed that micromolar solutions of siderophores and high-affinity synthetic chelator (ethylenediamine-N,N'-bis-2-hydroxyphenylacetic acid, EDDHA) accelerate EW to increase CDR rates. Building on these findings, we develop a potential biotechnology pathway for accelerating EW using the synthetic Fe-chelator EDDHA that is commonly used in agronomy to alleviate the Fe deficiency in high pH soils. Incubation of EW field trial soils with potassium-EDDHA solutions increased potential CDR rates by up to 2.5-fold by promoting the abiotic dissolution of basalt and upregulating microbial siderophore production to further accelerate weathering reactions. Moreover, EDDHA may alleviate potential Fe limitation of crops due to rising soil pH with EW over time. Initial cost-benefit analysis suggests potassium-EDDHA could lower EW-CDR costs by up to U.S. $77 t CO2 ha-1 to improve EW's competitiveness relative to other CDR strategies.

Application of rhizobium inoculation in regulating heavy metals in legumes: A meta-analysis

Rhizobium inoculation has been widely applied to alleviate heavy metal (HM) stress in legumes grown in contaminated soils, but it has generated inconsistent results with regard to HM accumulation in plant tissues. Here, we conducted a meta-analysis to assess the performance of Rhizobium inoculation for regulating HM in legumes and reveal the general influencing factors and processes. The meta-analysis showed that Rhizobium inoculation in legumes primarily increased the total HM uptake by stimulating plant biomass growth rather than HM phytoavailability. Inoculation had no significant effect on the average shoot HM concentration (p > 0.05); however, it significantly increased root HM uptake by 61 % and root HM concentration by 7 % (p < 0.05), indicating safe agricultural production while facilitating HM phytostabilisation. Inoculation decreased shoot HM concentrations and increased root HM uptake in Vicia, Medicago and Glycine, whereas it increased shoot HM concentrations in Sulla, Cicer and Vigna. The effects of inoculation on shoot biomass were suppressed by nitrogen fertiliser and native microorganisms, and the effect on shoot HM concentration was enhanced by high soil pH, organic matter content, and phosphorous content. Inoculation-boosted shoot nutrient concentration was positively correlated with increased shoot biomass, whereas the changes in pH and organic matter content were insufficient to significantly affect accumulation outcomes. Nitrogen content changes in the soil were positively correlated with changes in root HM concentration and uptake, whereas nitrogen translocation changes in the tissues were positively correlated with changes in HM translocation. Phosphorus solubilisation could improve HM phytoavailability at the expense of slight biomass promotion. These results suggest that the diverse growth-promoting characteristics of Rhizobia influence the trade-off between biomass-HM phytoavailability and HM translocation, impacting HM accumulation outcomes. Our findings can assist in optimising the utilisation of legume-Rhizobium systems in HM-contaminated soils.

Variation in soil bacterial community characteristics inside and outside the West Ordos National Nature Reserve, northern China.

Nature reserves are crucial for protecting biological habitats and maintaining biodiversity. Soil bacterial community plays an irreplaceable role in the structure and function of ecosystem. However, the impact of nature reserves on soil bacterial communities is still unclear. To explore the effects of desert grassland nature reserve management on soil microbial communities, we compared the differences in soil bacterial community composition, α-diversity and community structure inside and outside a desert grassland nature reserve, and explored the correlation between soil bacterial communities and plant biomass and soil chemical index. We found that (1) the relative abundance of Acidobacteriota is highest in the soil both inside and outside the nature reserve in shrub grassland; (2) the Chao1 index of soil bacterial communities in the core protected zone and general control zone of the reserve was significantly higher than that outside the reserve (p < 0.05) in the shrub grassland. Similarly, in the herbaceous grassland, the Shannon index of soil bacterial communities was significantly higher in the core protected zone of the reserve than that outside the reserve (p < 0.05). (3) While we found no significant difference in soil bacterial community structure between inside and outside the reserve in the shrub grassland, we found that the soil bacterial community structure in the core protected zone was significantly different from that outside the reserve in the herbaceous grassland (p < 0.05); (4) we also found that higher plant productivity and soil nutrients promoted most soil dominant bacterial phyla, while higher soil pH and salinity inhibited most soil dominant bacterial phyla. Our findings thus help better understand the influencing factors of and the mechanisms behind variation in soil bacterial communities inside and outside desert grassland nature reserves.

Impact of Abiotic and Biotic Environmental Conditions on the Development and Infectivity of Entomopathogenic Nematodes in Agricultural Soils.

Many organisms, including beneficial entomopathogenic nematodes (EPNs), are commonly found in the soil environment. EPNs are used as biopesticides for pest control. They have many positive characteristics and are able to survive at sites of application for a long time, producing new generations of individuals. The occurrence of populations depends on many environmental parameters, such as temperature, moisture, soil texture, and pH. Extreme temperatures result in a decrease in the survival rate and infectivity of EPNs. Both high humidity and acidic soil pH reduce populations and disrupt the biological activity of EPNs. Nematodes are also exposed to anthropogenic agents, such as heavy metals, oil, gasoline, and even essential oils. These limit their ability to move in the soil, thereby reducing their chances of successfully finding a host. Commonly used fertilizers and chemical pesticides are also a challenge. They reduce the pathogenicity of EPNs and negatively affect their reproduction, which reduces the population size. Biotic factors also influence nematode biology. Fungi and competition limit the reproduction and survival of EPNs in the soil. Host availability enables survival and affects infectivity. Knowledge of the influence of environmental factors on the biology of EPNs will allow more effective use of the insecticidal capacity of these organisms.

Global comparison shows that soil bacterial communities in extreme pH soils are more structured by deterministic processes

A major aim of microbial ecology is the search for basic ‘rules’ that dominate variation in microbial communities. An earlier comparison of several soil successional series showed that pH explained variation in the relative importance of stochastic versus deterministic processes in bacterial communities. In neutral pH soils, bacterial communities were more strongly influenced by stochastic processes than in low or high pH soils. Here, we took a broad level approach to attempt a more definitive answer of whether soil pH dominates bacterial community structuring using the global database of 237 samples. The beta-NTI showed that at both a global and continental scale, samples with low pH were dominated by deterministic processes, while in samples at around neutral pH, stochastic processes dominated. At high pH, stochasticity dominated on the global scale, but on several continents, the beta-NTI showed determinism predominating. Overall, it appears that bacterial community structuring is strongly and predictably affected by pH, with the most consistent difference observed between determinism at low pH and stochasticity at neutral pH. There is a need for hypothesis testing to explain why this trend exists. It is possible that at low pH, there is a greater selection for consortia to exploit resources, which leads to more predictable, deterministic combinations of species co-occurring. Additionally, the high energy demands for homeostasis and the constraints from the lack of available nutrient resources may impose greater niche-based competition, resulting in more deterministic community structuring at low pH.

Lithology-driven soil properties control of N2O production by ammonia oxidizers in subtropical forest soils

Lithology can strongly influence soil's physical and chemical properties, significantly affecting soil nitrogen (N) transformation rates. Ammonia-oxidizing archaea (AOA), ammonia-oxidizing bacteria (AOB) and complete ammonia oxidizers (comammox Nitrospira) constitute the major producers of soil nitrous oxide (N2O), but the importance of different lithology on their relative contributions still poorly understood, especially in terms of newly discovered and widespread comammox. To address this knowledge gap, three nitrification inhibitors, acetylene (ammonia oxidizers inhibitor), 1-octyne (AOB inhibitor) and 3,4-dimethylpyrazole phosphate (DMPP) (both AOB and comammox inhibitor), were used to selectively inhibit the activity of different ammonia oxidation groups in order to discriminate their respective roles in N2O production in forest soils developed on different lithologies (limestone and clastic rock). The results showed that AOB dominated N2O production (63.5 ± 3.3 %) in limestone soils with ammonium amendment, followed by AOA (34.5 ± 7.6 %), while comammox contributed 1 % of total N2O production with N2O yield of 0.03 ± 0.04 %. Higher N2O production by AOB in limestone soils is associated with higher soil pH, exchangeable calcium/magnesium and lower short-range order iron/aluminum minerals. However, the N2O yield by comammox (0.12 ± 0.12 %) in clastic rock soils was comparable to that by AOA (0.15 ± 0.14 %) and AOB (0.20 ± 0.13 %). Based on the results of the correlation analysis, comammox in the clastic rock soils produce greater amounts of N2O is closely related to the higher soil organic carbon and available phosphorus. The present study provided evidence that the lithology-driven soil properties markedly affect the N2O production from different ammonia oxidizers.

Distinguishing direct N2O emissions from 15N-labeled manure compost, urea, and maize roots in a field study

Nitrous oxide (N2O) emissions from agricultural activities are a significant contributor to global anthropogenic N2O emissions. Sustainable agriculture practices, including using manure compost to replace nitrogen (N) fertilizers, can reduce chemical fertilizer use and minimize negative impacts on soil health and water quality. However, the direct contributions of manure compost to N2O emissions have not been fully studied. We conducted a field study to distinguish the direct contributions of manure compost, urea, and residual maize roots to N2O emissions in an integrated crop-livestock agricultural system in Shandong Province, China. Using the 15N-labeling technique, we found that the majority (93.3%) of cumulative N2O emissions originated from the soil and other unaccounted sources. Notably, manure compost contributed 1.3%, while current-year urea, residual urea with root exudates, and maize root accounted for 3.4%, 1.9%, and 0.03% of cumulative N2O, respectively. Our results also demonstrated that applying manure compost in combination with urea resulted in lower seed yield-scaled N2O emissions (0.046 g N2O-N kg−1 seed) compared to applying urea alone, even when the total N input was identical, suggesting the potential of manure compost in a more sustainable agriculture model. The low emission factor of manure compost (0.005%) compared to urea (0.019%) supports this potential, indicating the slow-release nature of manure may mitigate N2O while maintaining crop yield. Additionally, the overall low emissions may be attributed to the relatively high soil pH (8.17), which influences the denitrification product ratio, favoring the conversion of N2O to N2. Our study provides valuable insights into the factors contributing to N2O emissions in integrated crop-livestock farming systems, and highlights the importance of distinguishing multiple sources of N2O emissions to develop effective strategies for reducing emissions while promoting sustainable agriculture.