Lake Le Bourget is a glacial lake, situated in a tectonically active region. The Wûrm glaciers scoured out an elongated overdeepened basin of more than 300 m below present lake level and the lake basin accumulated almost 150 m of post-glacial to Holocene sediments. The sediment infill of the basin was studied by means of two high resolution seismic surveys, in 1991 and in 1993. Additionally, a combined side scan sonar and bathymetry survey provided a detailed image of the lake floor topography. The sediment series clearly illustrate the evolution of the depositional environment with changing climate since the last déglaciation. The well-stratified character of the infill is in some places disturbed by faulting and sediment instabilities. A southern fault zone can be related to the sub-lacustrine continuation of a well-known basement fault. A northern fault zone is characterized by listric faulting, affecting the sub-lacustrine Rhône fan. The sediment instability deposits occur along the lake borders and near the delta regions, as the result of thick sediment accumulation on the sub-lacustrine slopes, prone to re-mobilisation, and the occurence of earthquakes triggering the sediment slides. At present, lake floor sediment deformation by recent to historical earthquakes is visible in the form of rectilinear scarps and fluid expulsion craters.