High Night Temperature Stress Research Articles

Systematic identification and characterization of microRNAs with target genes involved in high night temperature stress at the filling stage of rice.

High night temperature stress is one of the main environmental factors affecting rice yield and quality. More and more evidence shows that microRNA (miRNA) plays an important role in various abiotic stresses. However, the molecular network of miRNA regulation on rice tolerance to high night temperatures remains unclear. Here, small RNA, transcriptome and degradome sequencing were integrated to identify differentially expressed miRNAs, genes, and key miRNA-target gene pairs in rice heat-sensitive and heat-tolerant lines at the filling stage suffering from high night temperature stress. It was discovered that there were notable differences in the relative expression of 102 miRNAs between the two rice lines under stress. Meanwhile, 5263 and 5405 mRNAs were differentially expressed in the heat-sensitive line and heat-tolerant line, and functional enrichment analysis revealed that these genes were involved in heat-related processes and pathways. The miRNAs-mRNAs target relationship was further verified by degradome sequencing. Eventually, 49 miRNAs-222 mRNAs target pairs with reverse expression patterns showed significant relative expression changes between the heat-tolerant and the heat-sensitive line, being suggested to be responsible for the heat tolerance difference of these two rice lines. Functional analysis of these 222 mRNA transcripts showed that high night temperature-responsive miRNAs targeted these mRNAs involved in many heat-related biological processes, such as transcription regulation, chloroplast regulation, mitochondrion regulation, protein folding, hormone regulation and redox process. This study identified possible miRNA-mRNA regulation relationships in response to high night temperature stress in rice and potentially contributed to heat resistance breeding of rice in the future.

Evaluating metabolic and genomic data for predicting grain traits under high night temperature stress in rice.

The asymmetric increase in average nighttime temperatures relative to increase in average daytime temperatures due to climate change is decreasing grain yield and quality in rice. Therefore, a better genome-level understanding of the impact of higher night temperature stress on the weight of individual grains is essential for future development of more resilient rice. We investigated the utility of metabolites obtained from grains to classify high night temperature (HNT) conditions of genotypes, and metabolites and single-nucleotide polymorphisms (SNPs) to predict grain length, width, and perimeter phenotypes using a rice diversity panel. We found that the metabolic profiles of rice genotypes alone could be used to classify control and HNT conditions with high accuracy using random forest or extreme gradient boosting. Best linear unbiased prediction and BayesC showed greater metabolic prediction performance than machine learning models for grain-size phenotypes. Metabolic prediction was most effective for grain width, resulting in the highest prediction performance. Genomic prediction performed better than metabolic prediction. Integrating metabolites and genomics simultaneously in a prediction model slightly improved prediction performance. We did not observe a difference in prediction between the control and HNT conditions. Several metabolites were identified as auxiliary phenotypes that could be used to enhance the multi-trait genomic prediction of grain-size phenotypes. Our results showed that, in addition to SNPs, metabolites collected from grains offer rich information to perform predictive analyses, including classification modeling of HNT responses and regression modeling of grain-size-related phenotypes in rice.

Hydrogen Peroxide and GA3 Levels Regulate the High Night Temperature Response in Pistils of Wheat (Triticum aestivum L.).

High night temperature (HNT) impairs crop productivity through the reproductive failure of gametes (pollen and pistil). Though female gametophyte (pistil) is an equal partner in the seed-set, the knowledge of the antioxidant system(s) and hormonal control of HNT tolerance or susceptibility of pistils is limited and lacking. The objectives of this study were to determine the antioxidant mechanism for homeostatic control of free radicals, and the involvement of abscisic acid (ABA) and gibberellic acid (GA3) in HNT stress protection in the wheat pistils of contrasting wheat genotypes. We hypothesized that HNT tolerance is attributed to the homeostatic control of reactive oxygen species (ROS) and hormonal readjustment in pistils of the tolerant genotype. The ears of two contrasting wheat genotypes-HD 2329 (susceptible) and Raj 3765 (tolerant) were subjected to two HNTs (+5 °C and +8 °C) over ambient, in the absence and presence of dimethylthiourea (DMTU), a chemical trap of hydrogen peroxide (H2O2). Results showed that HNTs significantly increased ROS in pistils of susceptible genotype HD 2329 to a relatively greater extent compared to tolerant genotype Raj 3765. The response was similar in the presence or absence of DMTU, but the H2O2 values were lower in the presence of DMTU. The ROS levels were balanced by increased activity of peroxidase under HNT to a greater extent in the tolerant genotype. Cytosolic glyceraldehyde-3-phosphate dehydrogenase (GAPC) activity was inversely related to H2O2 production within a critical range in Raj 3765, indicating its modulation by H2O2 levels as no change was observed at the transcriptional level. The hormonal status showed increased ABA and decreased GA3 contents with increasing temperature. Our study elucidates the role of H2O2 and GA3 in stress tolerance of pistils of tolerant genotype where GAPC acts as a ROS sensor due to H2O2-mediated decrease in its activity.

Humidity Restriction, High Night Temperature and their Combination, during Post Flowering on Common Bean (Phaseolus vulgaris L.) Canopy and Pod Senescence

Background: Common bean (Phaseolus vulgaris L.) grain filling is vulnerable to drought and heat stress. The objective of the study was to evaluate the effect of humidity restriction, high night temperatures and their combination in common bean.Methods: The plants were grown in pots at maximum field capacity (100% FC) until the grain filling began. Afterwards, maintained until harvest at: 1) 100% FC, 2) 50% FC at ambient day/night temperature (AT), 22.58°C/16.94°C, 3) 100% FC with high night temperature (HNT) 21.47°C and 4) 50% FC with HNT (combined stress). Evaluations included phenotypic assessment using red-green-blue color segmentation in: green (healthy), yellow (senescence) and brown (necrotic). Result: The combined stress in the cv. Rosa Bufa significantly and synchronously accelerated leaves and pods senescence. In contrast, in leaves of cv. OTI, the loss of green color began several days earlier than in pods. The effect of HNT and combined stress depends on common bean cultivar.

High night temperature effects on wheat and rice: Current status and way forward.

Rapid increases in minimum night temperature than in maximum day temperature is predicted to continue, posing significant challenges to crop productivity. Rice and wheat are two major staples that are sensitive to high night-temperature (HNT) stress. This review aims to (i) systematically compare the grain yield responses of rice and wheat exposed to HNT stress across scales, and (ii) understand the physiological and biochemical responses that affect grain yield and quality. To achieve this, we combined a synthesis of current literature on HNT effects on rice and wheat with information from a series of independent experiments we conducted across scales, using a common set of genetic materials to avoid confounding our findings with differences in genetic background. In addition, we explored HNT-induced alterations in physiological mechanisms including carbon balance, source-sink metabolite changes and reactive oxygen species. Impacts of HNT on grain developmental dynamics focused on grain-filling duration, post-flowering senescence, changes in grain starch and protein composition, starch metabolism enzymes and chalk formation in rice grains are summarized. Finally, we highlight the need for high-throughput field-based phenotyping facilities for improved assessment of large-diversity panels and mapping populations to aid breeding for increased resilience to HNT in crops.

Improved cyber-physical system captured post-flowering high night temperature impact on yield and quality of field grown wheat

Winter wheat (Triticum aestivum L.) is essential to maintain food security for a large proportion of the world’s population. With increased risk from abiotic stresses due to climate variability, it is imperative to understand and minimize the negative impact of these stressors, including high night temperature (HNT). Both globally and at regional scales, a differential rate of increase in day and night temperature is observed, wherein night temperatures are increasing at a higher pace and the trend is projected to continue into the future. Previous studies using controlled environment facilities and small field-based removable chambers have shown that post-anthesis HNT stress can induce a significant reduction in wheat grain yield. A prototype was previously developed by utilizing field-based tents allowing for simultaneous phenotyping of popular winter wheat varieties from US Midwest and advanced breeding lines. Hence, the objectives of the study were to (i) design and build a new field-based infrastructure and test and validate the uniformity of HNT stress application on a scaled-up version of the prototype (ii) improve and develop a more sophisticated cyber-physical system to sense and impose post-anthesis HNT stress uniformly through physiological maturity within the scaled-up tents; and (iii) determine the impact of HNT stress during grain filling on the agronomic and grain quality parameters including starch and protein concentration. The system imposed a consistent post-anthesis HNT stress of + 3.8 °C until maturity and maintained uniform distribution of stress which was confirmed by (i) 0.23 °C temperature differential between an array of sensors within the tents and (ii) statistically similar performance of a common check replicated multiple times in each tent. On average, a reduction in grain-filling duration by 3.33 days, kernel weight by 1.25% per °C, grain number by 2.36% per °C and yield by 3.58% per °C increase in night temperature was documented. HNT stress induced a significant reduction in starch concentration indicating disturbed carbon balance. The pilot field-based facility integrated with a robust cyber-physical system provides a timely breakthrough for evaluating HNT stress impact on large diversity panels to enhance HNT stress tolerance across field crops. The flexibility of the cyber-physical system and movement capabilities of the field-based infrastructure allows this methodology to be adaptable to different crops.

Impact of high night temperature stress on different growth stages of wheat

Increasing temperature especially the High night temperature (HNT) is a major constriction for sustaining global food production under changing climate scenario. Recent climate change has resulted into events of abrupt night temperature rise either throughout the crop period or at specific growth stage. Historical temperature observations and model projections have predicted a more pronounced increase in night temperature [minimum temperature (Tmin.)] compared to that of day temperatures [maximum temperature (Tmax.)]. Hence, the present study was carried out to identify the most critical growth stage affected by HNT and their effects on physiological, growth and yield traits of wheat. A unique field-based movable temperature controlling system was designed to enhance the night temperature by 5 °C than ambient temperature. The three critical phenological stages of wheat i.e. at GS 15 (before tillering initiation), GS 45 (booting) and GS 75 (grain filling) of Zadok’s scale were separately subjected to HNT treatment. The results reveals that GS 75 (grain filling) was the most sensitive stage affected by HNT, which has recorded remarkable reduction in grain yield (GY), Harvest Index (HI), Thousand grain weight (TGW) and grain weight per spike (GWPS) compared to control treatment. Pearson correlation analysis showed that breeders can choose lines with higher TGW, GWPS and grain number per spike (GNPS) for obtaining better GY under HNT conditions and vegetative/booting stage HNT in field condition may not attribute for any significant yield loss.

Allelic variation in rice Fertilization Independent Endosperm 1 contributes to grain width under high night temperature stress.

Summary A higher minimum (night‐time) temperature is considered a greater limiting factor for reduced rice yield than a similar increase in maximum (daytime) temperature. While the physiological impact of high night temperature (HNT) has been studied, the genetic and molecular basis of HNT stress response remains unexplored.We examined the phenotypic variation for mature grain size (length and width) in a diverse set of rice accessions under HNT stress. Genome‐wide association analysis identified several HNT‐specific loci regulating grain size as well as loci that are common for optimal and HNT stress conditions.A novel locus contributing to grain width under HNT conditions colocalized with Fie1, a component of the FIS‐PRC2 complex. Our results suggest that the allelic difference controlling grain width under HNT is a result of differential transcript‐level response of Fie1 in grains developing under HNT stress.We present evidence to support the role of Fie1 in grain size regulation by testing overexpression (OE) and knockout mutants under heat stress. The OE mutants were either unaltered or had a positive impact on mature grain size under HNT, while the knockouts exhibited significant grain size reduction under these conditions.

Physiological and Biochemical Responses of Two Cotton (Gossypium hirsutum L.) Cultivars Differing in Thermotolerance to High Night Temperatures during Anthesis

Heat stress constitutes a major threat to crop production, and according to climatic projections, night temperatures are expected to increase faster and to a greater extent compared to day temperatures. While extensive research has been dedicated to the effects of higher than optimum day temperatures on cotton physiology, metabolism, and yield, and while heat-tolerant cotton cultivars have been introduced, the responses of such heat-tolerant cultivars to high night temperatures have not been evaluated. The objective of this study was to assess the efficiency of heat-tolerant cultivars to high night temperatures stress by monitoring the physiological and biochemical responses of two cotton cultivars, differing in thermotolerance, subjected to higher than optimum night temperatures, during anthesis. To that end, growth chamber experiments were conducted using two cotton cultivars differing in thermotolerance, namely ST5288B2RF (thermosensitive) and VH260 (thermotolerant). Treatments consisted of normal day/night temperatures (32/24 °C) and high night temperatures (32/30 °C) for 2 weeks at flowering (approximately 8 eight weeks after planting). The results indicated that VH260 was more thermotolerant than ST5288 even under conditions of high night temperature stress, as it managed to maintain its net photosynthetic rates, cell membrane integrity, as well as pistil carbohydrate contents and ultimately achieved higher total reproductive weight. It was concluded that heat tolerance of thermotolerant cultivars selected under conditions of high day temperatures is also conserved under high night temperatures, while net photosynthetic rates and cell membrane integrity can be utilized as selection traits for heat tolerance under either high day or night temperatures.

Season Affects Yield and Metabolic Profiles of Rice (Oryza sativa) under High Night Temperature Stress in the Field.

Rice (Oryza sativa) is the main food source for more than 3.5 billion people in the world. Global climate change is having a strong negative effect on rice production. One of the climatic factors impacting rice yield is asymmetric warming, i.e., the stronger increase in nighttime as compared to daytime temperatures. Little is known of the metabolic responses of rice to high night temperature (HNT) in the field. Eight rice cultivars with contrasting HNT sensitivity were grown in the field during the wet (WS) and dry season (DS) in the Philippines. Plant height, 1000-grain weight and harvest index were influenced by HNT in both seasons, while total grain yield was only consistently reduced in the WS. Metabolite composition was analysed by gas chromatography-mass spectrometry (GC-MS). HNT effects were more pronounced in panicles than in flag leaves. A decreased abundance of sugar phosphates and sucrose, and a higher abundance of monosaccharides in panicles indicated impaired glycolysis and higher respiration-driven carbon losses in response to HNT in the WS. Higher amounts of alanine and cyano-alanine in panicles grown in the DS compared to in those grown in the WS point to an improved N-assimilation and more effective detoxification of cyanide, contributing to the smaller impact of HNT on grain yield in the DS.

Systematic determination of the reproductive growth stage most sensitive to high night temperature stress in rice (Oryza sativa)

AbstractHigh night‐temperature (HNT) stress during the reproductive stage of rice (Oryza sativa L.) reduces spikelet fertility and yield by inhibiting important physiological processes. However, specifics such as the period of time that is most sensitive to HNT, is unknown. To investigate this, we conducted four controlled‐environment experiments with two rice cultivars, N22 (HNT tolerant) and WAB56–104 (HNT susceptible). These cultivars were exposed to varying durations and intensities of night temperatures (control, 24°C; HNT, 30 and 35°C) during the reproductive stage. The effect of HNT on spikelet fertility and grain weight varied with duration: spikelet fertility reduced by 47–77% when exposed to HNT for 15 nights, 6–29% when exposed for four nights, and 9–15% when exposed for 5.5 h (pre‐midnight, 1830–0000 h or post‐midnight, 0000–0530 h) for four nights. Spikelet fertility and grain weight were most sensitive to HNT during the first 4 d of anthesis, compared with 1–4, 5–8, and 9–12 d before anthesis. At anthesis, reduction in spikelet fertility did not differ significantly between pre‐ and post‐midnight high‐temperature treatments. Our results suggest that greatest sensitivity to HNT during the reproductive stage occurs during the first 4 d of anthesis, providing a reference for future studies involving HNT tolerance in rice.

Metabolic Dynamics of Developing Rice Seeds Under High Night-Time Temperature Stress.

High temperature stress during rice reproductive development results in yield losses. Reduced grain yield and grain quality has been associated with high temperature stress, and specifically with high night-time temperatures (HNT). Characterizing the impact of HNT on the phenotypic and metabolic status of developing rice seeds can provide insights into the mechanisms involved in yield and quality decline. Here, we examined the impact of warmer nights on the morphology and metabolome during early seed development in six diverse rice accessions. Seed size was sensitive to HNT in four of the six genotypes, while seed fertility and seed weight were unaffected. We observed genotypic differences for negative impact of HNT on grain quality. This was evident from the chalky grain appearance due to impaired packaging of starch granules. Metabolite profiles during early seed development (3 and 4 days after fertilization; DAF) were distinct from the early grain filling stages (7 and 10 DAF) under optimal conditions. We observed that accumulation of sugars (sucrose, fructose, and glucose) peaked at 7 DAF suggesting a major flux of carbon into glycolysis, tricarboxylic acid cycle, and starch biosynthesis during grain filling. Next, we determined hyper (HNT > control) and hypo (HNT < control) abundant metabolites and found 19 of the 57 metabolites to differ significantly between HNT and control treatments. The most prominent changes were exhibited by differential abundance of sugar and sugar alcohols under HNT, which could be linked to a protective mechanism against the HNT damage. Overall, our results indicate that combining metabolic profiles of developing grains with yield and quality parameters under high night temperature stress could provide insight for exploration of natural variation for HNT tolerance in the rice germplasm.

Quantitative iTRAQ-based proteomic analysis of rice grains to assess high night temperature stress.

Rice yield and quality are adversely affected by increasing global surface temperature, and are strongly attributed to high night temperature (HNT) than high daytime temperature. However, the molecular mechanism underlying the heat‐tolerant characteristics of rice remains unclear. In the present study, we compared the proteomes of heat‐tolerant and ‐sensitive lines of rice at early milky stage using an iTRAQ method. We have identified 38 differentially expressed proteins between the two lines, of which 32 proteins have been functionally annotated in NCBI and/or the UniProt database. These proteins were then classified into seven functional subgroups, which include signal transduction, transcript regulation, oxidation, defense response, transport, energy metabolism, and biosynthesis. Further analysis indicated that HNT stress could disrupt the redox equilibrium of plant cells, which in turn triggers the calcium‐dependent protein kinase and COP9 signalosome, thereby regulating downstream genes/proteins that are involved in the HNT response. The candidate proteins may provide genetic resources for the improvement of heat‐tolerant characteristics in rice, and the proposed model for signal transduction and transcriptional regulation may facilitate in the elucidation of the molecular mechanism underlying the response to HNT stress in rice.

Effect of high night temperatures during anthesis on cotton (Gossypium hirsutum L.) pistil and leaf physiology and biochemistry

Flowering in cotton is a sensitive stage to heat stress but the effects of high night temperatures on cotton's pistil metabolism are not well understood. The objective of this study was to evaluate the effects of high night temperatures on the carbohydrate, glutathione reductase and free polyamine content of the cotton pistil and its subtending leaf. Growth chamber experiments were conducted using cotton ('Gossypium hirsutum' L.) cultivar ST5288B2F. Treatments consisted of normal day/night (32/24 degreesC) and high night temperatures (32/30 degreesC) for two weeks at flowering. Pistil glucose and sucrose concentrations were significantly increased under conditions of high night temperatures and the same pattern was observed for starch concentrations. However, even though leaf respiration increased, only heat-stressed leaf starch levels were significantly lower compared to the control. In contrast, leaf glutathione reductase was significantly increased under high night temperatures while pistil glutathione reductase remained similar under both control and stress conditions. High night temperatures significantly increased leaf and pistil putrescine content, but had no effect on leaf and pistil spermidine content. Spermine content was significantly increased in the pistil but not in the leaf. In conclusion, leaf antioxidant metabolism appeared to be more efficient in protecting leaf carbohydrate metabolism under high night temperatures since reductions were observed only in leaf starch levels. Contrary to that, pistil antioxidant mechanism appeared less sensitive to the high night temperature stress and despite increases in pistil polyamine content accumulation of glucose, sucrose and starch concentrations was observed indicating a perturbation in carbohydrate metabolism.

Effects of high night temperature during grain filling on formation of physicochemical properties for japonica rice

Japonica rice (Oryza sativa, L.), Fangxin 4 was cultured under ambient night temperature (ANT) and high night temperature (HNT) in greenhouse. The average HNTs were 4.7 °C and 8.6 °C greater than ANTs in 2009 and 2010, respectively. The effects of HNT on formation of amyloplast, crystalline structure, thermal properties, and molecular structure were investigated during grain filling stage of 10–35 d after anthesis. Results indicated that amylose contents were gradually formed along with the maturing of rice amyloplast. Moreover, amylose content of HNT treatment decreased by 7.13%–15.44% compared with that of ANT at 35 d after anthesis. TO, TP, TC and ΔHgel for HNT were higher than those of ANT. From 10 to 35 d, relative crystallinity presented an increase–decrease–increase pattern, and the relative crystallinity of HNT was 4.06%–14.51% higher than that of ANT at 35 d after anthesis. Amylopectin under ANT had a higher percentage of degree of polymerization (DP) 6–11, while amylopectin under HNT had a higher percentage of DP 12–23. HNT stress had an influence on the formation of amylose content and amylopectin structure, and then changed the crystalline and thermal properties of rice starch.

Temporal chlorophyll fluorescence signals to track changes in optical properties of maturing rice panicles exposed to high night temperature

High night temperature (HNT) significantly influences rice grain filling dynamics. A novel phenotyping approach using chlorophyll fluorescence was employed to track changes in the optical properties of maturing rice panicles exposed to control and HNT. Two contrasting rice genotypes, Gharib (HNT sensitive) and N22 (highly tolerant), were exposed to control (23°C) and HNT (29°C), from panicle initiation till maturity. Changes in the optical properties of rice panicles throughout maturity were evaluated under field conditions by measuring (i) effective quantum yield of photosystem II efficiency (ΦII), (ii) steady-state chlorophyll fluorescence (FS) and (iii) ratio of emitted chlorophyll fluorescence at 690 and 735nm, under excitation at 435nm (F690/F735). Numerous vegetative indices (Vis) were correlated with fluorescence measurements to prove the accuracy of the phenotyping method. ΦII was selected as the most potent fluorescence parameter (i) to track changing optical properties of maturing rice panicles under both control and HNT and (ii) to estimate the elusive change point initiating rice panicle senescence. Detection of ΦII change point allows for larger genetic diversity scans under field conditions and for identifying novel donors for increasing rice yields and incorporating resilient strategies to reduce impact of HNT stress on grain-filling.

Transcriptome changes in rice (Oryza sativa L.) in response to high night temperature stress at the early milky stage.

BackgroundRice yield and quality are adversely affected by high temperatures, especially at night; high nighttime temperatures are more harmful to grain weight than high daytime temperatures. Unfortunately, global temperatures are consistently increasing at an alarming rate and the minimum nighttime temperature has increased three times as much as the corresponding maximum daytime temperature over the past few decades.ResultsWe analyzed the transcriptome profiles for rice grain from heat-tolerant and -sensitive lines in response to high night temperatures at the early milky stage using the Illumina Sequencing method. The analysis results for the sequencing data indicated that 35 transcripts showed different expressions between heat-tolerant and -sensitive rice, and RT-qPCR analyses confirmed the expression patterns of selected transcripts. Functional analysis of the differentially expressed transcripts indicated that 21 genes have functional annotation and their functions are mainly involved in oxidation-reduction (6 genes), metabolic (7 genes), transport (4 genes), transcript regulation (2 genes), defense response (1 gene) and photosynthetic (1 gene) processes. Based on the functional annotation of the differentially expressed genes, the possible process that regulates these differentially expressed transcripts in rice grain responding to high night temperature stress at the early milky stage was further analyzed. This analysis indicated that high night temperature stress disrupts electron transport in the mitochondria, which leads to changes in the concentration of hydrogen ions in the mitochondrial and cellular matrix and influences the activity of enzymes involved in TCA and its secondary metabolism in plant cells.ConclusionsUsing Illumina sequencing technology, the differences between the transcriptomes of heat-tolerant and -sensitive rice lines in response to high night temperature stress at the early milky stage was described here for the first time. The candidate transcripts may provide genetic resources that may be useful in the improvement of heat-tolerant characters of rice. The model proposed here is based on differences in expression and transcription between two rice lines. In addition, the model may support future studies on the molecular mechanisms underlying plant responses to high night temperatures.Electronic supplementary materialThe online version of this article (doi:10.1186/s12864-015-1222-0) contains supplementary material, which is available to authorized users.