Herbicide-resistant Maize Research Articles

Early prediction of maize resistance to nicosulfuron using hyperspectral imaging and deep learning: Method and mechanism

Inappropriate use of herbicides in agricultural fields can result in significant phytotoxic effects on maize, adversely affecting both yield and quality. The development of herbicide-resistant maize varieties is a crucial strategy for managing herbicide-related challenges in agriculture. However, traditional methods for screening resistant strains are often time-consuming and inefficient, presenting several limitations. Consequently, there is a pressing need for a rapid and precise methodology to evaluate herbicide resistance in maize. This study involved a field trial to evaluate herbicide resistance in maize, utilizing two resistant and two sensitive varieties. We developed an ATT-RES model using hyperspectral data from maize leaves subjected to herbicide stress to predict resistance. The model’s accuracy and generalizability were confirmed by integrating datasets across different years, planting seasons, and varieties. Additionally, this study examined the correlation between leaf spectra and corresponding physiological and biochemical indicators under herbicide stress by constructing a regression model and investigated the mechanisms through which spectra can predict herbicide resistance in maize. The findings indicate that on the fourth day after herbicide treatment, the model’s predictive accuracy exceeded 90 %. The accuracy peaked on the seventh day, achieving up to 95 %. The ATT-RES-based transfer model attained prediction accuracy of 93.55 %, 90.63 %, and 95.86 % across various years, varieties, and seasons, respectively. The results presented here offer significant advantages over traditional models such as Support Vector Machines (SVM), Multilayer Perceptrons (MLP), and AlexNet. Furthermore, we employed Partial Least Squares Regression (PLSR) to analyze the relationship between leaf physiological-biochemical parameters and spectral data. The analysis revealed significant correlations between the spectra and key biochemical markers: glutathione (GSH, Rp2 = 0.59), malondialdehyde (MDA, Rp2 = 0.48), chlorophyll content (SPAD, Rp2 = 0.82), and water content (WC, Rp2 = 0.71). The prediction of resistance was primarily influenced by variations in leaf SPAD and WC, but also showed correlations with GSH and MDA levels in the leaves. This study contributes valuable theoretical and technological insights that facilitate early and precise prediction of herbicide resistance in maize. The advancements demonstrated in this research hold significant potential for improving crop management and reducing the adverse impacts of herbicides on the environment.

CRISPR/Cas9-mediated homology donor repair base editing system to confer herbicide resistance in maize (Zea mays L.)

Weed infestation is a significant concern to crop yield loss, globally. The potent broad-spectrum glyphosate (N-phosphomethyl-glycine) has a widely utilized herbicide, acting on the shikimic acid pathway within chloroplast by inhibiting 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS). This crucial enzyme plays a vital role in aromatic amino acid synthesis. Repurposing of CRISPR/Cas9-mediated gene-editing was the inflection point for generating novel crop germplasm with diverse genetic variations in essential agronomic traits, achieved through the introduction of nucleotide substitutions at target sites within the native genes, and subsequent induction of indels through error-prone non-homologous end-joining DNA repair mechanisms. Here, we describe the development of efficient herbicide-resistant maize lines by using CRISPR/Cas9 mediated site-specific native ZmEPSPS gene fragment replacement via knock-out of conserved region followed by knock-in of desired homologous donor repair (HDR-GATIPS-mZmEPSPS) with triple amino acid substitution. The novel triple substitution conferred high herbicide tolerance in edited maize plants. Transgene-free progeny harbouring the triple amino acid substitutions revealed agronomic performances similar to that of wild-type plants, suggesting that the GATIPS-mZmEPSPS allele substitutions are crucial for developing elite maize varieties with significantly enhanced glyphosate resistance. Furthermore, the aromatic amino acid contents in edited maize lines were significantly higher than in wild-type plants. The present study describing the introduction of site-specific CRISPR/Cas9- GATIPS mutations in the ZmEPSPS gene via genome editing has immense potential for higher tolerance to glyphosate with no yield penalty in maize.

Effective Striga control and yield intensification on maize farms in western Kenya with N fertilizer and herbicide-resistant variety.

Maize production in western Kenya is limited by the spread of parasitic weed Striga hermonthica and depletion of soil nutrient stocks. Nitrogen (N) fertilizer and imidazolinone resistant (IR) maize are key elements in the agronomic toolbox to control infestations and enhance yields. The circumstances under which their use, individually or combined, is most effective on farmer fields have not been well documented. Inappropriate management decisions and low returns on investments arise from this knowledge gap, causing hunger and poverty in smallholder communities to persist. Experiments were carried out on 60 fields in three different agroecosystems of western Kenya using full-factorial treatments with non-herbicide treated maize (DH) and herbicide treated maize (IR), and N fertilizer omission and application. Trials were stratified on a field with low and high soil fertility within individual farms and repeated over two seasons. Cultivating IR maize instead of DH maize decreased the emergence of Striga with 13 shoots m-2 on average while applying N fertilizer on DH maize led to a reduction of 5 shoots m-2 on average. Decreases of Striga by use of IR maize and N fertilizer were between 6 and 23 shoots m-2 larger at the site with high levels of infestation than at the sites with medium or low emergence. Input of N fertilizer increased grain harvests by 0.59 ton ha-1 on average while use of IR maize enhanced the productivity with 0.33 ton ha-1 on average. Use of N fertilizer had similar yield effects in all three sites, whereas use of IR maize at the site with high Striga emergence increased maize production by 0.26-0.39ton ha-1 more than at the sites with medium or low emergence. The greater Striga responses to IR maize and the greater yield responses to N fertilizer demonstrate their use could be optimized according to field conditions and management goals. Combining IR maize and N fertilizer has larger added yield benefits where their individual effects on grain productivity are smaller. Findings from this study indicate that farmers in western Kenya require guidance on how to align the use of herbicide resistant maize and inorganic N inputs with the level of Striga infestation and maize yield on their fields for effectively controlling the pernicious weed and enhancing food production.

Proteomic and Metabolomic Evaluation of Insect- and Herbicide-Resistant Maize Seeds.

Label-free quantitative proteomic (LFQ) and widely targeted metabolomic analyses were applied in the safety evaluation of three genetically modified (GM) maize varieties, BBL, BFL-1, and BFL-2, in addition to their corresponding non-GM parent maize. A total of 76, 40, and 25 differentially expressed proteins (DEPs) were screened out in BBL, BFL-1, and BFL-2, respectively, and their abundance compared was with that in their non-GM parents. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that most of the DEPs participate in biosynthesis of secondary metabolites, biosynthesis of amino acids, and metabolic pathways. Metabolomic analyses revealed 145, 178, and 88 differentially accumulated metabolites (DAMs) in the BBL/ZH58, BFL-1/ZH58, and BFL-2/ZH58×CH72 comparisons, respectively. KEGG pathway enrichment analysis showed that most of the DAMs are involved in biosynthesis of amino acids, and in arginine and proline metabolism. Three co-DEPs and 11 co-DAMs were identified in the seeds of these GM maize lines. The proteomic profiling of seeds showed that the GM maize varieties were not dramatically different from their non-GM control. Similarly, the metabolomic profiling of seeds showed no dramatic changes in the GM/non-GM maize varieties compared with the GM/GM and non-GM/non-GM maize varieties. The genetic background of the transgenic maize was found to have some influence on its proteomic and metabolomic profiles.

Physiological dynamics dominate the response of canopy far-red solar-induced fluorescence to herbicide treatment

Solar-induced chlorophyll fluorescence (SIF) has shown great potential for detecting changes in vegetation function under herbicide stress. However, how physiological (ΦF, canopy SIF emission efficiency) and non-physiological (e.g., structure and illumination) dynamics regulate canopy SIF, and the coupling between SIF and gross primary production (GPP) under herbicide stress remains unclear. Here, we conducted continuous eddy covariance flux and far-red SIF measurements during the early stage of maize in an herbicide-resistant maize field, where herbicide exclusively affects weeds. We investigated the performance of SIF, GPP, and vegetation indices (VIs) in capturing herbicide stress and then explored the sensitivity of SIF to the effects of herbicide treatments by disentangling canopy SIF into the physiological (ΦF) and non-physiological components (NIRvP). We found that SIF rapidly increased in response to the herbicide and that GPP decreased, and that both were more responsive than VIs in capturing the early effects of herbicides. Thus, the opposing responses in SIF and GPP disrupted their otherwise linear relationship during herbicide treatment. More importantly, we found that the increased ΦF dominated the variation of SIF during the early stages of herbicide stress, while the influence of NIRvP was prominent in the variability of SIF in the absence of herbicide. By unraveling its physiological and non-physiological contributions, our findings advance our understanding of how SIF responds to herbicide stress in heterogeneous cropland and will improve our interpretation of SIF as a tool for monitoring photosynthesis.

Adaptive introgression from maize has facilitated the establishment of teosinte as a noxious weed in Europe

Global trade has considerably accelerated biological invasions. The annual tropical teosintes, the closest wild relatives of maize, were recently reported as new agricultural weeds in two European countries, Spain and France. Their prompt settlement under climatic conditions differing drastically from that of their native range indicates rapid genetic evolution. We performed a phenotypic comparison of French and Mexican teosintes under European conditions and showed that only the former could complete their life cycle during maize cropping season. To test the hypothesis that crop-to-wild introgression triggered such rapid adaptation, we used single nucleotide polymorphisms to characterize patterns of genetic variation in French, Spanish, and Mexican teosintes as well as in maize germplasm. We showed that both Spanish and French teosintes originated from Zea mays ssp. mexicana race "Chalco," a weedy teosinte from the Mexican highlands. However, introduced teosintes differed markedly from their Mexican source by elevated levels of genetic introgression from the high latitude Dent maize grown in Europe. We identified a clear signature of divergent selection in a region of chromosome 8 introgressed from maize and encompassing ZCN8, a major flowering time gene associated with adaptation to high latitudes. Moreover, herbicide assays and sequencing revealed that French teosintes have acquired herbicide resistance via the introgression of a mutant herbicide-target gene (ACC1) present in herbicide-resistant maize cultivars. Altogether, our results demonstrate that adaptive crop-to-wild introgression has triggered both rapid adaptation to a new climatic niche and acquisition of herbicide resistance, thereby fostering the establishment of an emerging noxious weed.

Can the growing of transgenic maize threaten protected Lepidoptera in Europe?

We evaluated whether protected European butterflies can potentially be at risk if transgenic maize is extensively grown in Central Europe. We explored potential consequences of both insect resistant (IR) and herbicide resistant (HR) transgenic maize. IR maize can produce pollen that is toxic to lepidopteran larvae, and this puts butterfly species at possible risk if the presence of young larvae coincides with maize flowering, during which large quantities of maize pollen can be deposited on vegetation. By considering the timing of maize flowering in Europe and the phenology of the protected Lepidoptera species, we found that 31 species had at least one generation where 50% of the larval stage overlapped with maize flowering, and 69 species for which first instar larvae were present during maize pollen shedding. HR maize allows high concentration herbicide treatments on fields without seasonal limitation, which can drastically reduce weed densities. In cases where such weed species are host plants for protected butterflies, reduced host plant/food availability can result, causing population decreases. By using published information, we first identified the important weed species in major maize-growing European countries. Subsequently, we checked whether the host plants of protected Lepidoptera included species that are common maize weeds. We identified 140 protected species having food plants that are common weeds in one or more of the major European maize-growing countries. If HR maize is grown in Europe, there is a potential hazard that their food plants will seriously decline, causing a subsequent decline of these protected species.

Assessment of Management Options on Striga Infestation and Maize Grain Yield in Kenya.

The parasitic purple witchweed [Striga hermonthica (Del.) Benth.] is a serious constraint to maize production in sub-Saharan Africa, especially in poor soils. Various Striga spp. control measures have been developed, but these have not been assessed in an integrated system. This study was conducted to evaluate a set of promising technologies for S. hermonthica management in western Kenya. We evaluated three maize genotypes either intercropped with peanut (Arachis hypogaea L.), soybean [Glycine max (L.) Merr.], or silverleaf desmodium [Desmodium uncinatum (Jacq.) DC] or as a sole crop at two locations under artificial S. hermonthica infestation and at three locations under natural S. hermonthica infestation between 2011 and 2013. Combined ANOVA showed significant (P < 0.05) cropping system and cropping system by environment interactions for most traits measured. Grain yield was highest for maize grown in soybean rotation (3,672 kg ha−1) under artificial infestation and in D. uncinatum and peanut cropping systems (3,203 kg ha−1 and 3,193 kg ha−1) under natural infestation. Grain yield was highest for the Striga spp.-resistant hybrid under both methods of infestation. A lower number of emerged S. hermonthica plants per square meter were recorded at 10 and 12 wk after planting on maize grown under D. uncinatum in the artificial S. hermonthica infestation. A combination of herbicide-resistant maize varieties intercropped with legumes was a more effective method for S. hermonthica control than individual component technologies. Herbicide-resistant and Striga spp.-resistant maize integrated with legumes would help reduce the Striga spp. seedbank in the soil. Farmers should be encouraged to adopt an integrated approach to control Striga spp. for better maize yields.

Striga Biocontrol on a Toothpick: A Readily Deployable and Inexpensive Method for Smallholder Farmers.

Striga hermonthica (witchweed) is a parasitic weed that attacks and significantly reduces the yields of maize, sorghum, millet, and sugarcane throughout sub-Saharan Africa. Low cost management methods such as hand weeding, short crop rotations, trap cropping, or conventional biocontrol have not been effective. Likewise, Striga-tolerant or herbicide-resistant maize cultivars are higher yielding, but are often beyond the economic means of sustenance farmers. The fungal pathogen, Fusarium oxysporum f.sp. strigae, has been the object of numerous studies to develop Striga biocontrol. Under experimental conditions this pathogen can reduce the incidence of Striga infestation but field use is not extensive, perhaps because it has not been sufficiently effective in restoring crop yield and reducing the soil Striga seed bank. Here we brought together Kenyan and US crop scientists with smallholder farmers to develop and validate an effective biocontrol strategy for management of Striga on smallholder farms. Key components of this research project were the following: (1) Development of a two-step method of fungal delivery, including laboratory coating of primary inoculum on toothpicks, followed by on-farm production of secondary field inoculum in boiled rice enabling delivery of vigorous, fresh inoculum directly to the seedbed; (2) Training of smallholder farmers (85% women), to produce the biocontrol agent and incorporate it into their maize plantings in Striga-infested soils and collect agronomic data. The field tests expanded from 30 smallholder farmers to a two-season, 500-farmer plot trial including paired plus and minus biocontrol plots with fertilizer and hybrid seed in both plots and; (3) Concerted selection of variants of the pathogen identified for enhanced virulence, as has been demonstrated in other host parasite systems were employed here on Striga via pathogen excretion of the amino acids L-leucine and L-tyrosine that are toxic to Striga but innocuous to maize. This overall strategy resulted in an average of >50% increased maize yield in the March to June rains season and >40% in the September to December rains season. Integration of this enhanced plant pathogen to Striga management in maize can significantly increase the maize yield of smallholder farmers in Kenya.

Building foundations for an open perspective on synthetic biology research and innovation

Building foundations for an open perspective on synthetic biology research and innovation

Dominos in the dairy: An analysis of transgenic maize in Dutch dairy farming

EU member states require farmers growing transgenic maize to respect a minimum distance from fields with non-transgenic maize. Previous studies have theoretically argued that such minimum distance requirements may lead to a so-called ‘domino effect’ where farmers who want to grow transgenic maize are forced to grow the non-transgenic variety and in turn impose the same constraints on their neighbors. This article applies a spatially explicit farm model to a dairy region in the Southern Netherlands to assess how farmers growing non-transgenic maize limit other farmers' potential to grow transgenic herbicide-resistant maize. The results indicate that the minimum distance requirements can severely limit the benefits from herbicide resistant maize. Having different land use options in one farm, however, enables dairy farmers to grow transgenic maize despite having one or more neighbors growing non-transgenic maize. We also find that the share of the domino effect in the overall impact of minimum distance requirements decreases with the density of farmers not growing transgenic maize.

Detection of herbicide-resistant maize by using loop-mediated isothermal amplification of the pat selectable marker gene

Loop-mediated isothermal amplification (LAMP) is a novel nucleic acid amplification method that reagents react to under isothermal conditions with high specificity, efficiency and rapidity. We used LAMP for detection of herbicide-resistant maize, which is a widespread genetically modified crop. Pat gene, a widely used selectable marker, was amplified by a set of four special primers that recognized six distinct sequences of the target. We studied the optimized conditions for LAMP using different Mg 2+ , dNTPs, betaine and primers concentrations. Furthermore, we tested the sensitivity and specificity of LAMP as compared to PCR. This work shows that the LAMP method can detect a specific pat gene from herbicide-resistant maize and their test results are consistent with the results of the conventional PCR methods. However, LAMP assay results were found to be more sensitive than the conventional PCR. Key words: Herbicide-resistant maize, loop-mediated isothermal amplification (LAMP), transgenic maize detection, pat gene.

Is there a Weed Shift in Roundup Ready Maize?

AbstractThe cultivation of transgenic glyphosate-resistant crop varieties can simplify weed control in crops such as maize and others. On the other hand, the repeated use of broadly effective herbicides like glyphosate, especially in the same crop, can have a negative effect on biodiversity. Additionally there is a risk for a spread of more tolerant or even resistant weed species.It was the aim of a 6-years field study (2003-2008) to investigate weed effects of use of glyphosate in a continuous transgenic herbicide-resistant maize rotation at three sites in Germany. These sites differed significantly in terms of soil, climate and initial weed spectrum. The studies focussed on the comparison between local herbicide standards and split applications of Roundup Ready (360 g L^-1^ glyphosate) applied at dosages of 1,5 + 1,5; 2 + 2 and 3 + 3 L ha^-1^ Roundup Ready.Concerning the potential changes in weed communities over longer periods of time, the study did not indicate any negative effect on weed infestation, communities or diversity, of the glyphosate treatments compared to the local herbicide standard. Concerning species richness, there was no clear trend of the Roundup Ready treatments. Possible changes of the abundances of individual species were affected by the initial weed spectrum and consequently by the site conditions. As far as the conventional herbicides are efficiently used, they have no other effect than the glyphosate applications. Similar results were seen for the Shannon’s diversity index and Shannon’s evenness index.In sum, and looking at annual effects, it could be concluded from this 6 years study that 1) there are no statistically significant differences between local standard herbicide treatments and the glyphosate treatments assessed in this study on the mean values of seed bank, species richness, species diversity and dominance; 2) the data collected on the different parameters showed an enormous variability within sites and years; 3) a dosage of 3 + 3 L ha^-1^ Roundup Ready avoids spread of certain weed species like _Chenopodium album_ or Urtica urens; 3) as far as the standard herbicides were applied correctly in terms of a high and wide efficiency, they will have the same effect as the Roundup Ready treatments.

The development of herbicide-resistant maize: stable Agrobacterium-mediated transformation of maize using explants of type II embryogenic calli

One of the limitations to conducting maize Agrobacterium-mediated transformation using explants of immature zygotic embryos routinely is the availability of the explants. To produce immature embryos routinely and continuously requires a well-equipped greenhouse and laborious artificial pollination. To overcome this limitation, an Agrobacterium-mediated transformation system using explants of type II embryogenic calli was developed. Once the type II embryogenic calli are produced, they can be subcultured and/or proliferated conveniently. The objectives of this study were to demonstrate a stable Agrobacterium-mediated transformation of maize using explants of type II embryonic calli and to evaluate the efficiency of the protocol in order to develop herbicide-resistant maize. The type II embryogenic calli were inoculated with Agrobacterium tumefaciens strain C58C1 carrying binary vector pTF102, and then were subsequently cultured on the following media: co-cultivation medium for 1 day, delay medium for 7 days, selection medium for 4 × 14 days, regeneration medium, and finally on germination medium. The T-DNA of the vector carried two cassettes (Ubi promoter-EPSPs ORF-nos and 35S promoter–bar ORF-nos). The EPSPs conferred resistance to glyphosate and bar conferred resistance to phosphinothricin. The confirmation of stable transformation and the efficiency of transformation was based on the resistance to phosphinothricin indicated by the growth of putative transgenic calli on selection medium amended with 4 mg l−1 phosphinothricin, northern blot analysis of bar gene, and leaf painting assay for detection of bar gene-based herbicide resistance. Northern blot analysis and leaf painting assay confirmed the expression of bar transgenes in the R1 generation. The average transformation efficiency was 0.60%. Based on northern blot analysis and leaf painting assay, line 31 was selected as an elite line of maize resistant to herbicide.

Environmental impact of herbicide regimes used with genetically modified herbicide-resistant maize

Environmental impact of herbicide regimes used with genetically modified herbicide-resistant maize

Striga Management and the African Farmer

Striga asiatica and S. hermonthica are widespread plant parasites of cereals in Sub-Saharan Africa. In maize cropland alone, Striga has infested about 2.4 million ha, resulting in yield loss of 1.6 million tons per year, valued at US$383 million. Because the parasite attacks below ground, conventional weeding is largely ineffective. Researchers have been slow to develop other Striga control practices useful to small-scale African farmers. Two recent technical breakthroughs, however, offer opportunities for better Striga management. First, herbicide-resistant maize lines provide several weeks' chemical protection from infection, resulting in over one ton per ha yield improvement and reducing Striga expression by 80%. Second, many legumes induce Striga seed to germinate and die in the absence of susceptible host roots, a characteristic usefully employed in cereal–legume intercropping and rotation. The challenge is to translate these technical achievements into products and technologies available to and adopted by Africa's poor farmers.

Environmental impact of herbicide regimes used with genetically modified herbicide-resistant maize

With the potential advent of genetically modified herbicide-resistant (GMHR) crops in the European Union, changes in patterns of herbicide use are predicted. Broad-spectrum, non-selective herbicides used with GMHR crops are expected to substitute for a set of currently used herbicides, which might alter the agro-environmental footprint from crop production. To test this hypothesis, the environmental impact of various herbicide regimes currently used with non-GMHR maize in Belgium was calculated and compared with that of possible herbicide regimes applied in GMHR maize. Impacts on human health and the environment were calculated through the pesticide occupational and environmental risk (POCER) indicator. Results showed that the environmental impact of herbicide regimes solely relying on the active ingredients glyphosate (GLY) or glufosinate-ammonium (GLU) is lower than that of herbicide regimes applied in non-GMHR maize. Due to the lower potential of GLY and GLU to contaminate ground water and their lower acute toxicity to aquatic organisms, the POCER exceedence factor values for the environment were reduced approximately by a sixth when GLY or GLU is used alone. However, the environmental impact of novel herbicide regimes tested may be underestimated due to the assumption that active ingredients used with GMHR maize would be used alone. Data retrieved from literature suggest that weed control efficacy is increased and resistance development delayed when GLY or GLU is used together with other herbicides in the GMHR system. Due to the partial instead of complete replacement of currently used herbicide regimes, the beneficial environmental impact of novel herbicide regimes might sometimes be reduced or counterbalanced. Despite the high weed control efficacy provided by the biotechnology-based weed management strategy, neither indirect harmful effects on farmland biodiversity through losses in food resources and shelter, nor shifts in weed communities have been demonstrated in GMHR maize yet. However, with the increasing adoption rate of GMHR maize and their associated novel herbicide regimes, this situation is expected to change in the short-term.

The potential of a herbicide resistant maize technology for Striga control in Africa

Striga is an obligate parasitic weed that attacks cereal crops in sub-Saharan Africa. In Western Kenya, it has been identified by farmers as their major pest problem in maize. A new technology, consisting of coating seed of imidazolinone resistant (IR) maize varieties with the imidazolinone herbicide, imazapyr, has proven to be very effective in controlling Striga on farmer fields. To bring this technology to the farmer, a sustainable delivery system needs to be developed, preferably with substantial participation of the private sector. To help extension agents and seed companies to develop appropriate strategies, the potential for this technology was analyzed by combining different data sources into a Geographic Information System (GIS). Superimposing secondary data, field surveys, agricultural statistics and farmer surveys made it possible to clearly identify the Striga-prone areas in western Kenya. Results found that Striga affected a maize area of 246,000 ha annually, with a population of 6.4 million people and maize production of 580,000 tons, or 81 kg/person. Population density in this area is high at 359 people/km 2. A survey of 123 farmers revealed that 70% of them have Striga in their fields. A contingent valuation (CV) survey indicated that farmers would, on average, be willing to buy 3.67 kg of the IR-maize seed each at current seed prices, sufficient to sow 44% of their maize area. By extrapolation over the maize area in the zone, total potential demand for IR-maize seed is estimated at 2000–2700 tons annually. Similar calculations, but based on much less precise data and expert opinion rather than farmer surveys or trials, gives an estimate of the potential demand for IR-maize seed in Africa of 153,000 tons.

Integrated management of Striga hermonthica, stemborers, and declining soil fertility in western Kenya

Striga hermonthica (Delile) Benth., stemborers, and declining soil fertility are serious threats to sustainable food production in the Lake Victoria zone of Kenya. To address these constraints, promising integrated crop management technologies were evaluated, using a multi-locational design in four sub-locations in Siaya and Vihiga district (western Kenya) for six cropping seasons. Technologies evaluated consisted of the traditional maize ( Zea mays L.) – bean ( Phaseolus vulgaris L.) intercrop, maize – Desmodium (Desmodium uncinatum (Jacq.) DC.) push–pull intercrop, Crotalaria ( Crotalaria ochroleuca G. Don) – maize rotation, and soybean ( Glycine max (L.) Merr) – maize rotation. Within each of these systems, imazapyr-coated herbicide-resistant maize (IR-maize) and fertilizer were super-imposed as sub-plot factors. The push–pull system was observed to significantly reduce Striga emergence and stemborer damage from the second season onwards. IR-maize reduced and delayed Striga emergence from the first cropping season. Differences in Striga emergence and stemborer damage between the other systems were not significantly different. After five cropping seasons, the Striga seedbank was significantly higher in the maize-bean intercrop system than in the push–pull system under both maize varieties while the rotational systems had intermediate values not different from the day zero values. Under IR-maize, the Striga seedbank was significantly lower than under local maize for all cropping systems. Maize yields varied between seasons, districts, and cropping systems. Yields in the push–pull system were higher than in the maize-bean intercrop after two seasons and in the absence of mid-season drought stress. Both maize and soybean responded significantly to fertilizer application for both districts and for most seasons. The various interventions did not substantially affect various soil fertility-related parameters after five seasons. In the short term, IR-maize integrated in a push–pull system is the most promising option to reduce Striga while the rotational systems may need a longer timeframe to reduce the Striga seedbank. Finally, farmer-led evaluation of the various technologies will determine which of those is really most acceptable under the prevailing farming conditions.

Marker assisted introgression of opaque2 gene into herbicide resistant elite maize inbred lines

Marker assisted selection in combination with conventional breeding can greatly accelerate the introgression of modified opaque2 genotype into herbicide resistant maize. By combining these two approaches, time and costs are greatly minimized. The application of opaque2 allele specific SSR markers was done on materials already undergoing selection in a breeding program for converting herbicide resistant maize lines into quality protein maize (QPM) which is the equivalent of modified opaque2 phenotype. The breeder had selected QPM lines using the light table in the previous cycle and we used leaf samples to extract DNA for analysis of the presence of the opaque2 gene using SSR markers. Two co-dominant SSR markers phi057 and umc1066 and a dominant marker phi112 were used. Umc1216, a modifier marker was also tested in combination with the opaque2 markers with the objective of using the marker to select for modifiers for the opaque2 phenotype. The modified FTA paper technology protocol was applied in field sampling. The results showed 97% of the lines were opaque2 while 3% were non-opaque2. Both methods of conventional breeding using light table and marker assisted selection (MAS) were comparable. However, the application of SSR markers and the FTA technology offers the breeder a fast, time saving, reliable and less labour intensive method of screening QPM maize during the early growing stages instead of having to wait to screen the kernels on the light table after harvesting. Moreover, the routine biochemical analysis for high lysine and tryptophan levels need not be carried out at each backcross since the presence of the opaque2 gene is confirmed with markers.