Helical Aggregates Research Articles

Converting the Amyloidogenic Islet Amyloid Polypeptide into a Potent Nonaggregating Peptide Ligand by Side Chain-to-Side Chain Macrocyclization.

The islet amyloid polypeptide (IAPP), also known as amylin, is a hormone playing key physiological roles. However, its aggregation and deposition in the pancreatic islets are associated with type 2 diabetes. While this peptide adopts mainly a random coil structure in solution, its secondary conformational conversion into α-helix represents a critical step for receptor activation and contributes to amyloid formation and associated cytotoxicity. Considering the large conformational landscape and high amyloidogenicity of the peptide, as well as the complexity of the self-assembly process, it is challenging to delineate the delicate interplay between helical folding, peptide aggregation, and receptor activation. In the present study, we probed the roles of helical folding on the function-toxicity duality of IAPP by restricting its conformational ensemble through side chain-to-side chain stapling via azide-alkyne cycloaddition. Intramolecular macrocyclization (i; i + 4) constrained IAPP into α-helix and inhibited its aggregation into amyloid fibrils. These helical derivatives slowed down the self-assembly of unmodified IAPP. Site-specific macrocyclization modulated the capacity of IAPP to perturb lipid bilayers and cell plasma membrane and reduced, or even fully inhibited, the cytotoxicity associated with aggregation. Furthermore, the α-helical IAPP analogs showed moderate to high potency toward cognate G protein-coupled receptors. Overall, these results indicate that macrocyclization represents a promising strategy to protect an amyloidogenic peptide hormone from aggregation and associated toxicity, while maintaining high receptor activity.

Living Hybrid Exciton Materials: Enhanced Fluorescence and Chiroptical Properties in Living Supramolecular Polymers with Strong Frenkel/Charge‐Transfer Exciton Coupling

AbstractA family of chiral perylene diimides (PDIs) was newly developed as excellent circularly polarized luminescence (CPL) materials. They are asymmetrically derivatized with a double‐alkyl‐chained L‐ or D‐glutamate unit and a linear or branched alkyl chain. When water is added to the tetrahydrofuran (THF) solution of glutamate‐PDI‐linear‐alkyl chain compounds, kinetically formed H‐aggregates are formed in globular nanoparticles (NPs). These NPs undergo spontaneous transformation into thermodynamically stable nanotubes via helical nanostructures, which showed structured broad spectra originating from the strong coupling of delocalized Frenkel excitations (FE) and charge transfer excitations (CTE). Significant enhancement of circular dichroism (CD), fluorescence quantum yield, and circularly polarized luminescence (CPL) with luminescence dissymmetry factor (glum) are observed during the transformation of NPs to the FE/CTE‐coupled helical and tubular structures. This transformation process is significantly accelerated by applying physical stimuli, i.e., ultrasonication or adding helical aggregates as seed crystals, a feature unique to living supramolecular polymerization. Meanwhile, the branched chain‐containing PDIs only form H‐aggregates and did not show FE/CTE hybrid exciton states with living supramolecular polymerization properties. This study unveils that suitably designed chiral PDI derivatives show FE/CTE coupling accompanied by high fluorescence quantum yields, enhanced chiroptical properties, and supramolecular living polymerization characteristics.

Living Hybrid Exciton Materials: Enhanced Fluorescence and Chiroptical Properties in Living Supramolecular Polymers with Strong Frenkel/Charge-Transfer Exciton Coupling.

A family of chiral perylene diimides (PDIs) was newly developed as excellent circularly polarized luminescence (CPL) materials. They are asymmetrically derivatized with a double-alkyl-chained L- or D-glutamate unit and a linear or branched alkyl chain. When water is added to the tetrahydrofuran (THF) solution of glutamate-PDI-linear-alkyl chain compounds, kinetically formed H-aggregates are formed in globular nanoparticles (NPs). These NPs undergo spontaneous transformation into thermodynamically stable nanotubes via helical nanostructures, which showed structured broad spectra originating from the strong coupling of delocalized Frenkel excitations (FE) and charge transfer excitations (CTE). Significant enhancement of circular dichroism (CD), fluorescence quantum yield, and circularly polarized luminescence (CPL) with luminescence dissymmetry factor (glum) are observed during the transformation of NPs to the FE/CTE-coupled helical and tubular structures. This transformation process is significantly accelerated by applying physical stimuli, i.e., ultrasonication or adding helical aggregates as seed crystals, a feature unique to living supramolecular polymerization. Meanwhile, the branched chain-containing PDIs only form H-aggregates and did not show FE/CTE hybrid exciton states with living supramolecular polymerization properties. This study unveils that suitably designed chiral PDI derivatives show FE/CTE coupling accompanied by high fluorescence quantum yields, enhanced chiroptical properties, and supramolecular living polymerization characteristics.

Effect of branch length of cluster dextrin on the textural and rheological properties of κ-carrageenan emulsion gels

In this paper, a range of novel cluster dextrins (CDs) with high molecular weight (∼105 g/mol) and narrow molecular weight distribution were fabricated by α-amylase and branching enzyme (BE, EC 2.4.1.18). The influence of CDs on the physicochemical properties of κ-carrageenan (KC) emulsion gels was investigated. The average particle size of the composite emulsion gels containing CD was decreased by 7.85–12.66 μm, and the gel network was more uniform and denser, owing to stronger non-covalent interactions in the composite sample system. Textural results demonstrated that the composite emulsion gels exhibited higher hardness and springiness, but lower cohesiveness. CDs hindered the formation and aggregation of KC double helices, as evidenced by reducing the intensity of the sulfate group peak at 1223 cm−1. Furthermore, CDs increased the apparent viscosity, storage modulus (G'), and melting temperature (Tm) of emulsion gels, based on rheological results. CDs with longer branch lengths were more prone to entangle with KC chains to optimize the gel structure, exhibiting a more significant effect on the physicochemical properties of emulsion gels. The present study provided a new insight for constructing a new energy delivery system.

Helix‐Sense‐Selective Memory Polymerization of Biphenylylacetylenes Bearing Carboxy and Amino Groups in Water

We report the helix‐sense‐selective memory polymerization (HSMP) of achiral biphenylylacetylenes bearing carboxy and amino pendant groups in the presence of basic and acidic chiral guests in water, respectively. The HSMP proceeds in a highly helix‐sense‐selective manner driven by noncovalent chiral ionic interactions between the monomers and guests under kinetic control, producing the one‐handed helical polymers with a static memory of helicity in one‐pot during the polymerization in a very short time, accompanied by amplification of asymmetry. The carboxy‐bound helicity‐memorized polymer self‐assembles into a cholesteric liquid crystal in concentrated water, in which a variety of basic achiral fluorophores further co‐assembles to form supramolecular helical aggregates that exhibit an induced circularly polarized luminescence in a color tunable manner.

Helix-Sense-Selective Memory Polymerization of Biphenylylacetylenes Bearing Carboxy and Amino Groups in Water.

We report the helix-sense-selective memory polymerization (HSMP) of achiral biphenylylacetylenes bearing carboxy and amino pendant groups in the presence of basic and acidic chiral guests in water, respectively. The HSMP proceeds in a highly helix-sense-selective manner driven by noncovalent chiral ionic interactions between the monomers and guests under kinetic control, producing the one-handed helical polymers with a static memory of helicity in one-pot during the polymerization in a very short time, accompanied by amplification of asymmetry. The carboxy-bound helicity-memorized polymer self-assembles into a cholesteric liquid crystal in concentrated water, in which a variety of basic achiral fluorophores further co-assembles to form supramolecular helical aggregates that exhibit an induced circularly polarized luminescence in a color tunable manner.

Unraveling the interplay between choline chloride and collagen mimetic peptide with facile end modifications: A case study of Gly-Gly-(Pro-Hyp-Gly)8-Gly-Gly

Collagen mimetic peptides (CMPs) have garnered substantial interest in the field of regenerative medicine, tissue engineering, and biomaterials owing to their promising prospects for utilization within these domains. In the last few years, significant research efforts have been made to study how small CMPs can autonomously arrange themselves to create large scale collagen-like formations. These structures exhibit potential for advancing the field of next-generation biomaterials. In this investigation, we have synthesized a peptide named G-POG8, with the sequence Gly-Gly-(Pro-Hyp-Gly)8-Gly-Gly, and we have examined the behaviour of G-POG8 under different concentrations of choline chloride (ChCl) through various biophysical techniques. These methodologies include circular dichroism (CD), UV–vis, fluorescence and Fourier transform infrared (FTIR) spectroscopy, differential scanning calorimetry (DSC) transmission electron microscopy (TEM), and dynamic light scattering (DLS). The findings indicate that the presence of Gly at both terminals of the CMP, G-POG8, results in a significant influence on the stability and aggregation behaviour of CMP triple helices. It is plausible that ChCl may have established favourable interactions with the terminal residues of G-POG8, potentially disrupting the end-to-end process of triple helix aggregation. This investigation lays the basis for the development of innovative biomaterials based on collagen, featuring improved properties, and opens up possibilities for cutting-edge biomedical applications.

Functionalization of Supramolecular Polymers by Dynamic Covalent Boroxine Chemistry.

Molecular scaffolds that enable the combinatorial synthesis of new supramolecular building blocks are promising targets for the construction of functional molecular systems. Here, we report a supramolecular scaffold based on boroxine that enables the formation of chiral and ordered 1D supramolecular polymers, which can be easily functionalized for circularly polarized luminescence. The boroxine monomers are quantitatively synthesized in situ, both in bulk and in solution, from boronic acid precursors and cooperatively polymerize into 1D helical aggregates stabilized by threefold hydrogen-bonding and π-π stacking. We then demonstrate amplification of asymmetry in the co-assembly of chiral/achiral monomers and the co-condensation of chiral/achiral precursors in classical and in situ sergeant-and-soldiers experiments, respectively, showing fast boronic acid exchange reactions occurring in the system. Remarkably, co-condensation of pyrene boronic acid with a hydrogen-bonding chiral boronic acid results in chiral pyrene aggregation with circularly polarized excimer emission and g-values in the order of 10-3. Yet, the electron deficiency of boron in boroxine makes them chemically addressable by nucleophiles, but also sensitive to hydrolysis. With this sensitivity in mind, we provide first insights into the prospects offered by boroxine-based supramolecular polymers to make chemically addressable, functional, and adaptive systems.

Functionalization of Supramolecular Polymers by Dynamic Covalent Boroxine Chemistry

AbstractMolecular scaffolds that enable the combinatorial synthesis of new supramolecular building blocks are promising targets for the construction of functional molecular systems. Here, we report a supramolecular scaffold based on boroxine that enables the formation of chiral and ordered 1D supramolecular polymers, which can be easily functionalized for circularly polarized luminescence. The boroxine monomers are quantitatively synthesized in situ, both in bulk and in solution, from boronic acid precursors and cooperatively polymerize into 1D helical aggregates stabilized by threefold hydrogen‐bonding and π–π stacking. We then demonstrate amplification of asymmetry in the co‐assembly of chiral/achiral monomers and the co‐condensation of chiral/achiral precursors in classical and in situ sergeant‐and‐soldiers experiments, respectively, showing fast boronic acid exchange reactions occurring in the system. Remarkably, co‐condensation of pyrene boronic acid with a hydrogen‐bonding chiral boronic acid results in chiral pyrene aggregation with circularly polarized excimer emission and g‐values in the order of 10−3. Yet, the electron deficiency of boron in boroxine makes them chemically addressable by nucleophiles, but also sensitive to hydrolysis. With this sensitivity in mind, we provide first insights into the prospects offered by boroxine‐based supramolecular polymers to make chemically addressable, functional, and adaptive systems.

Stimuli-responsive synthetic helical polymers.

Synthetic dynamic helical polymers (supramolecular and covalent) and foldamers share the helix as a structural motif. Although the materials are different, these systems also share many structural properties, such as helix induction or conformational communication mechanisms. The introduction of stimuli responsive building blocks or monomer repeating units in these materials triggers conformational or structural changes, due to the presence/absence of the external stimulus, which are transmitted to the helix resulting in different effects, such as assymetry amplification, helix inversion or even changes in the helical scaffold (elongation, J/H helical aggregates). In this review, we show through selected examples how different stimuli (e.g., temperature, solvents, cations, anions, redox, chiral additives, pH or light) can alter the helical structures of dynamic helical polymers (covalent and supramolecular) and foldamers acting on the conformational composition or molecular structure of their components, which is also transmitted to the macromolecular helical structure.

An integrated approach towards extracting structural characteristics of chlorosomes from a bchQ mutant of Chlorobaculum tepidum.

Chlorosomes, the photosynthetic antenna complexes of green sulfur bacteria, are paradigms for light-harvesting elements in artificial designs, owing to their efficient energy transfer without protein participation. We combined magic angle spinning (MAS) NMR, optical spectroscopy and cryogenic electron microscopy (cryo-EM) to characterize the structure of chlorosomes from a bchQ mutant of Chlorobaculum tepidum. The chlorosomes of this mutant have a more uniform composition of bacteriochlorophyll (BChl) with a predominant homolog, [8Ethyl, 12Ethyl] BChl c, compared to the wild type (WT). Nearly complete 13C chemical shift assignments were obtained from well-resolved homonuclear 13C-13C RFDR data. For proton assignments heteronuclear 13C-1H (hCH) data sets were collected at 1.2 GHz spinning at 60 kHz. The CHHC experiments revealed intermolecular correlations between 132/31, 132/32, and 121/31, with distance constraints of less than 5 Å. These constraints indicate the syn-anti parallel stacking motif for the aggregates. Fourier transform cryo-EM data reveal an axial repeat of 1.49 nm for the helical tubular aggregates, perpendicular to the inter-tube separation of 2.1 nm. This axial repeat is different from WT and is in line with BChl syn-anti stacks running essentially parallel to the tube axis. Such a packing mode is in agreement with the signature of the Qy band in circular dichroism (CD). Combining the experimental data with computational insight suggests that the packing for the light-harvesting function is similar between WT and bchQ, while the chirality within the chlorosomes is modestly but detectably affected by the reduced compositional heterogeneity in bchQ.

The motion of three-dimensional fractal aggregates in homogeneous shear flow

A model for the motion of aggregates in low Reynolds number flow has been established by utilizing the Stokesian dynamics and applying the quaternion as global attitude parameter. The model has been validated by the theorical solution of sphere doublet in shear flow, the simple helical aggregates, and the experiment on the settling of some specific objects in still water. The motion of fractal aggregates has been further studied, aiming to get better understanding of the dynamic behavior of fine-grained sediment flocs in shear flow. The fractal aggregates have been generated using the diffusion-limited aggregation model, which has similar fractal dimension as natural flocs. The results illustrate that fractal aggregates undergo a complex rotation in shear flow, which exhibit a bi-periodic characteristic. The motion of a particle within the fractal aggregate shows three-dimensional trajectory in a simple shear flow, affected by its initial orientation. The major rotation period is approximately 4π/γ̇, which corresponds to the rotation period of a sphere with shear strength γ̇. The deviation decreases with the increase in the size of the fractal aggregate.

Mechanochromism and circularly polarized luminescence of chiral cyclometalated platinum(II) complexes with different configurations and aggregated forms

Using a new synthesis method, we have prepared two different coordination configurations of chiral cyclometalated N^C^N-coordinated and C^N-coordinated Pt(II) complexes by controlling the Cl− source. Single-crystal X-ray diffraction determines the tridentate and bidentate structures. All N^C^N-coordinated and C^N-coordinated Pt(II) complexes emit green-yellow light in CH2Cl2 solutions. Square-planar N^C^N-Coordinated complexes (−)-1 and (−)-2 show remarkable aggregation-induced emission behaviors in mixed CH2Cl2/n-hexane solutions with the emission quantum yield (Φem) intensified significantly. In addition, the luminescent color could change from green-yellow to red by varying the volumetric fraction of n-hexane. Complex (−)-2 grafted with long alkyl chains could form helical stacking aggregates, inducing enhanced ECD signals and measurable CPL activity. The yellow and orange solids of complex (−)-1 can be separated, and a high-contrast mechanochromic luminescence is found for the yellow form. Furthermore, the potential utility has been attempted in anti-counterfeiting applications based on the yellow solid of (−)-1. This study provides a new design strategy for the preparation of chiral cyclometalated Pt(II) complexes with specific configurations and aggregated forms that have various optical and electronic properties.

Synergism between yellow mustard gum and κ-carrageenan studied by structural and rheological methods

Yellow mustard gum (YMG), a clean-label hydrocolloid with commercial potential, has been found to synergistically interact with κ-carrageenan to form a stronger gel. The primary gelation mechanism has been proposed but needs a thorough investigation and understanding from multiple techniques. In addition to the rheological methods of dynamic oscillation, this study used transient mechanical tests (stress relaxation), differential scanning calorimetry (DSC) and cryogenic scanning electron microscopy (cryo-SEM) to evaluate gel characteristics, thermal properties and microstructure of YMG-κ-carrageenan binary gels. The stress relaxation spectrum showed that the interactions between the two types of gums were mainly polymer associations. The DSC cooling and heating scans revealed that YMG did not disturb the coil-to-helix transition of κ-carrageenan but affected its helix aggregation during gel setting. The microstructure of the binary gel network captured by cryo-SEM showed a denser and more compact gel structure with smaller pores in comparison with the κ-carrageenan gel structure. All these results supported a refined gelation mechanism proposed in this study. This thorough investigation of the synergistic gelation between YMG and κ-carrageenan not only supports applications of the binary mixtures as texturizers, gelling aids and thickeners but also expands the application of YMG to promote its eventual commercialization.

Rheological investigation of the network structure in mixed gels of Kappa and Iota Carrageenan

Carrageenans comprise linear sulfated high molecular weight polysaccharides obtained from seaweeds and are routinely used in food and home/personal care industries. Various kinds of carrageenans differ from others based on the ester sulphate group location on the polysaccharide chains. Pure and mixed systems of Kappa Carrageenan and Iota Carrageenan undergo a three-dimensional gel network structure formation or dissociation with a change in temperature. During the sol-gel and gel-sol transitions, the Carrageenan systems pass through a unique critical gel state, where dynamic moduli are scale-invariant owing to the self-similar structure of the three-dimensional network. In this work, we obtain the critical gel state associated with pure and mixed systems of Kappa and Iota Carrageenan during cooling and heating by exploring the material behavior for a range of frequencies. Interestingly, on the one hand, the mixed gels show a higher critical sol-gel transition temperature compared to the pure systems at equal individual concentrations. On the other hand, the low temperature moduli of mixed gels are closer to that of Kappa Carrageenan when the concentration of the same is more than half in the mixture. The rheological measurements demonstrate that the Kappa Carrageenan strongly affects the nature of aggregation of double helices of Iota Carrageenan, but Iota Carrageenan does not have a significant influence on that of Kappa Carrageenan. These results suggest an associative, interactive network formation between Kappa and Iota Carrageenan in the mixture, such that the gel behavior is predominantly influenced by Kappa Carrageenan.

Solvent-Induced Pathway Complexity of Supramolecular Polymerization Unveiled Using the Hansen Solubility Parameters.

Supramolecular building blocks assembling into helical aggregates are ubiquitous in the current literature, yet the role of solvents in these supramolecular polymerizations often remains elusive. Here, we present a systematic study that quantifies solvent-supramolecular polymer compatibility using the Hansen solubility parameters (δD, δH, and δP). We first studied the solubility space of the supramolecular building block triazine-1,3,5-tribenzenecarboxamide S-T. Due to its amphiphilic nature, a dual-sphere model based on 58 solvents was applied describing the solubility space of the monomeric state (green sphere) and supramolecular polymer state (blue sphere). To our surprise, further in-depth spectroscopic and morphological studies unveiled a distinct solubility region in-between the two spheres giving rise to the formation of higher-order aggregated structures. This phenomenon occurs due to subtle differences in polarity between the solvent and the side chains and highlights the solvent-induced pathway complexity of supramolecular polymerizations. Subsequent variations in concentration and temperature led to the expansion and contraction of both solubility spheres providing two additional features to tune the monomer and supramolecular polymer solubility. Finally, we applied our dual-sphere model on structurally disparate monomers, such as Zn-porphyrin (S-P) and triphenylamine (S-A), demonstrating the generality of the model and the importance of the supramolecular monomer design in connection with the solvent used. This work unravels the solvent-induced pathway complexity of discotic supramolecular building blocks using a parametrized approach in which interactions between the solvent and solute play a crucial role.

Enantioselectivity of discretized helical supramolecule consisting of achiral cobalt phthalocyanines via chiral-induced spin selectivity effect

Enantioselectivity of helical aggregation is conventionally directed either by its homochiral ingredients or by introduction of chiral catalysis. The fundamental question, then, is whether helical aggregation that consists only of achiral components can obtain enantioselectivity in the absence of chiral catalysis. Here, by exploiting enantiospecific interaction due to chiral-induced spin selectivity (CISS) that has been known to work to enantio-separate a racemic mixture of chiral molecules, we demonstrate the enantioselectivity in the assembly of mesoscale helical supramolecules consisting of achiral cobalt phthalocyanines. The helical nature in our supramolecules is revealed to be mesoscopically incorporated by dislocation-induced discretized twists, unlike the case of chiral molecules whose chirality are determined microscopically by chemical bond. The relevance of CISS effect in the discretized helical supramolecules is further confirmed by the appearance of spin-polarized current through the system. These observations mean that the application of CISS-based enantioselectivity is no longer limited to systems with microscopic chirality but is expanded to the one with mesoscopic chirality.

Cyclic deformation behavior of agarose hydrogels prepared at different gelation concentrations

Effects of the gelation concentration (c0) on cyclic deformation behavior of agarose hydrogels have been examined. Agarose hydrogels prepared at c0 = 10 g L-1 (A10) show smaller Young's modulus than those prepared at c0 = 30 g L-1 (A30) even when the mechanical properties have been measured at the same agarose concentration 50 g L-1. Moreover, A10 has stronger tendency to exhibit the residual strain in the cyclic deformation curves compared to A30. These results can be explained based on the gelation mechanism specific to agarose, where helices of agarose aggregate via hydrogen bonding to be the crosslinks. It has been proposed from the optical rotation that the helix content just after gelation increases with c0, while the helix content for A10 was higher than that for A30 at 50g L-1. Since the lower helix content at c0 for A10 results in less stable aggregates of agarose helices, it can be said that the cyclic deformation behavior as well as Young's modulus of agarose hydrogels primarily reflects the network structure determined by c0.

Rationalizing the Extent of the "Sergeants-and-Soldiers" Effect in Supramolecular Helical Catalysts: Effect of Copper Coordination.

Aggregation of supramolecular helices, for example through interdigitation of their alkyl side chains or through more directional supramolecular interactions, leads to hierarchical architectures with original structural and chiroptical properties. However, when a chiral monomer (the "sergeant") is introduced as a minor component in these assemblies composed of a majority of achiral monomers (the "soldiers"), it is not clear how the aggregation changes the ability of the sergeant to induce a preferential helicity to the polymer main chain (the so-called "sergeants-and-soldiers" effect). This study reports a detailed investigation of the influence of [Cu(OAc)2 ⋅H2 O] coordination on the structure and chiroptical properties of helical hydrogen-bonded co-assemblies composed of a catalytically-active benzene-1,3,5-tricarboxamide (BTA) monomer, acting as the "soldier", and an enantiopure BTA monomer derived from cyclohexylalanine, playing the role of the "sergeant". The copper actually significantly influences the extent of the "sergeants-and-soldiers" effect since it acts as a crosslink that induces some chiral defects in the supramolecular helices. These crosslinks appear to be preserved during the catalytic hydrosilylation of 4-nitroacetophenone. The aggregation of helices through the formation of copper crosslinks is reversible since homochiral single helices are exclusively formed in the case of sergeant-rich assemblies. The fact that both main chain and side chain aggregation affects the chiroptical properties of supramolecular helices must be considered in the design of elaborated chiral materials.

Self-assembly of chiral diketopyrrolopyrrole chromophores giving supramolecular chains in monolayers and twisted microtapes.

Chiral diketopyrrolopyrroles appended with enantiomeric ethyl lactate functions through an ether linkage to the aryl backbone of the chromophore were synthesized via the Mitsunobu reaction. The molecules have good solubility and excellent optical properties, high molar absorption coefficients, and fluorescence quantum yields. Helical aggregates with circular dichroism arising from the supramolecular arrangement are seen in both solution and thin films, and the aggregates also display circularly polarized luminescence (glum ≈ ±0.1). The molecules assemble to give monolayers on graphite and precipitate from solution forming supramolecular twisted tapes hundreds of microns long.