Gapura sub-district is located in the Sumenep Regency, Madura Island, that also recognized as the center of salt production. Due to not availability of a clean water network from the municipal water network (PDAM), the daily water need of the community is provided by groundwater. Local people have reported several brackish waters in the wells since a few years ago. Therefore, the purpose of this research is to identify seawater intrusion potential in this area. The seawater intrusion is analyzed based on the value of electrical conductivity (EC) and groundwater hydrochemistry. From the analysis of EC values, it can be concluded that there are two out of thirty groundwater samples classified as moderately saline water, while in the study of groundwater ion values, both two samples have chloride values that are more than 240 mg/L. However, the Cl and HCO3 ratio show that the two samples will only have a small effect on seawater. Therefore, it can be concluded that the Gapura sub-district does not have seawater intrusion. High salinity in some wells is mostly coming from salt production in this area.