Guanidinium Head Groups Research Articles

Does thermotropic liquid crystalline self-assembly control biological activity in amphiphilic amino acids? - tyrosine ILCs as a case study.

Amphiphilic amino acids represent promising scaffolds for biologically active soft matter. In order to understand the bulk self-assembly of amphiphilic amino acids into thermotropic liquid crystalline phases and their biological properties a series of tyrosine ionic liquid crystals (ILCs) was synthesized, carrying a benzoate unit with 0-3 alkoxy chains at the tyrosine unit and a cationic guanidinium head group. Investigation of the mesomorphic properties by polarizing optical microscopy (POM), differential scanning calorimetry (DSC) and X-ray diffraction (WAXS, SAXS) revealed smectic A bilayers (SmAd) for ILCs with 4-alkoxy- and 3,4-dialkoxybenzoates, whereas ILCs with 3,4,5-trisalkoxybenzoates showed hexagonal columnar mesophases (Colh), while different counterions had only a minor influence. Dielectric measurements revealed a slightly higher dipole moment of non-mesomorphic tyrosine-benzoates as compared to their mesomorphic counterparts. The absence of lipophilic side chains on the benzoate unit was important for the biological activity. Thus, non-mesomorphic tyrosine benzoates and crown ether benzoates devoid of additional side chains at the benzoate unit displayed the highest cytotoxicities (against L929 mouse fibroblast cell line) and antimicrobial activity (against Escherichia coli ΔTolC and Staphylococcus aureus) and promising selectivity ratio in favour of antimicrobial activity.

Molecular dynamics and electrical conductivity of Guanidinium based ionic liquid crystals: Influence of cation headgroup configuration

Molecular mobility and conductivity of four bent shaped tetramethylated guanidinium based ionic liquid crystals (ILCs) with varying head group configuration (cyclic or acyclic) and alkyl chain length is investigated by a combination of broadband dielectric spectroscopy (BDS) and specific heat spectroscopy (SHS). Two dielectrically active processes observed in the plastic crystalline phase at low and high temperatures are denoted as γ and α1 relaxation. The former is assigned to localized fluctuations of methyl groups including nitrogen atoms in the guanidinium head groups. SHS investigations reveal one calorimetrically active process termed as α2 relaxation process. The temperature dependencies of the relaxation rates of α1 and α2 are similar for the cyclic ILC while for the acyclic counterpart they are different. Possible molecular assignments for the α1 and α2 relaxation are discussed in detail. Alongside relaxation processes, a significant conductivity contribution was observed for all ILCs, where the absolute value of DC conductivity increases by 4 orders of magnitude at the transition from the crystalline to the hexagonal columnar phase. The increase is traced to the change in the underlying conduction mechanism from the delocalized electrical conduction in the Cry phase to ionic conduction in the quasi 1D ion columns formed in the hexagonal columnar mesophase.

In vitro cellular uptake and neuroprotective efficacy of poly-arginine-18 (R18) and poly-ornithine-18 (O18) peptides: critical role of arginine guanidinium head groups for neuroprotection.

We have previously demonstrated that Cationic Arginine-Rich Peptides (CARPs) and in particular poly-arginine-18 (R18; 18-mer of arginine) exhibit potent neuroprotective properties in both in vitro and in vivo neuronal injury models. Based on the current literature, there is a consensus that arginine residues by virtue of their positive charge and guanidinium head group is the critical element for imparting CARP neuroprotective properties and their ability to traverse cell membranes. This study examined the importance of guanidinium head groups in R18 for peptide cellular uptake, localization, and neuroprotection. This was achieved by using poly-ornithine-18 (O18; 18-mer of ornithine) as a control, which is structurally identical to R18, but possesses amino head groups rather than guanidino head groups. Epifluorescence and confocal fluorescence microscopy was used to examine the cellular uptake and localization of the FITC-conjugated R18 and O18 in primary rat cortical neurons and SH-SY5Y human neuroblastoma cell cultures. An in vitro cortical neuronal glutamic acid excitotoxicity model was used to compare the effectiveness of R18 and O18 to inhibit cell death and intracellular calcium influx, as well as caspase and calpain activation. Fluorescence imaging studies revealed cellular uptake of both FITC-R18 and FITC-O18 in neuronal and SH-SY5Y cells; however, intracellular localization of the peptides differed in neurons. Following glutamic acid excitotoxicity, only R18 was neuroprotective, prevented caspases and calpain activation, and was more effective at reducing neuronal intracellular calcium influx. Overall, this study demonstrated that for long chain cationic poly-arginine peptides, the guanidinium head groups provided by arginine residues are an essential requirement for neuroprotection but are not required for entry into neurons.

Effect of Composition on Antibacterial Activity of Sequence-Defined Cationic Oligothioetheramides.

In response to the urgent need for new antibiotic development strategies, antimicrobial peptides and their synthetic mimetics are being investigated as promising alternatives to traditional antibiotics. To facilitate their development into clinically viable candidates, we need to understand what molecular features and physicochemical properties are needed to induce cell death. Within the context of sequence-defined oligothioetheramides (oligoTEAs), we explore the impact of the cationic pendant group and backbone hydrophobicity on the potency and selectivity of antibacterial oligoTEAs. Through antibacterial, cytotoxicity, membrane destabilization, and membrane depolarization assays, we find a strong dependency on the nature of the cationic group and improved selectivity toward bacteria by tuning backbone hydrophobicity. In particular, compounds with the guanidinium headgroup are more potent than those with amines. Finally, we identify a promising oligoTEA, PDT-4G, with enhanced activity in vitro (minimum inhibitory concentration (MIC) ∼ 0.78 μM) and moderate activity in a mouse thigh infection model of methicillin-resistant Staphylococcus aureus. The studies outlined in this work provide insights into the effect of macromolecular physicochemical properties on antibacterial potency. This knowledge base will be vital for researchers engaged in the ongoing development of clinically viable antibacterial agents.

Guanidinium-Based Polymerizable Surfactant as a Multifunctional Molecule for Controlled Synthesis of Nanostructured Materials with Tunable Morphologies.

Rationally and efficiently controlling the morphology of nanomaterials plays a crucial role in significantly enhancing their functional properties and expending their applications. In this work, a strategy for controlled synthesis of diverse nanostructured materials with tunable morphologies was developed using a guanidinium-based surfactant with a polymerizable pyrrole unit as a multifunctional molecule that can serve not only as a structure-directing agent for mesostucture formation but also as a monomer and carbon source. The unique self-assembly behavior of the guanidinium head group under different conditions allows the synthesized surfactants to form different aggregates and thus to produce silica nanomaterials with multiple morphologies (such as sphere, disk, fiber, and cocoon) in conjunction with sol-gel chemistry. Besides the mesostructured silicates, by further exploring the polymerization and carbonization features of pyrrole units that were densely packed in the formed silica nanochannels, diverse nanostructured materials such as mesostructured conducting polymers, carbon materials, and metal-nanoparticle (NP)-decorated forms could also be easily obtained in one-pot fashion for various applications, such as energy storage and catalysis. As a demonstration, carbon nanotubes and Pd-NP-doped hollow carbon spheres were fabricated, which exhibited good specific capacitance (101.7 F g-1) at the scan rates of 5 mV s-1 and excellent catalytic performance (100% conversion for three cycles) in the Suzuki C-C coupling reaction, respectively. All of the results indicate that our strategy may open a new avenue for efficiently accessing diverse nanostructured materials with tunable morphologies for wide applications.

Induction of ionic smectic C phases: a systematic study of alkyl-linked guanidinium-based liquid crystals

ABSTRACTA series of ionic liquid crystals with an alkoxy biphenyl unit tethered via an alkyl spacer to a guanidinium head group were synthesised and the mesomorphic properties were studied by differential scanning calorimetry, polarising optical microscopy and X-ray diffraction (XRD; WAXS and SAXS). Whereas all symmetrical guanidinium chlorides with the same chain lengths in alkyl tail and spacer displayed enantiotropic SmA2 phases, monotropic SmC2 phases with 1–2 K temperature range were only formed for chain lengths ≥ C10. Shifting the calamitic core more closely to the ionic head group by decreasing the tether length and simultaneously increasing the terminal alkyl chain improved the stability of both SmA and SmC phases considerably and led to enantiotropic SmC phases for the guanidinium chloride with C14 alkyl tail and C6 spacer. An even more pronounced effect was detected during anion exchange. Bromide, iodide, hexafluorophosphate, thiocyanate and triflate suppressed any SmC phase, whereas tetrafluoroborate behaved similar to chloride maintaining the SmC phase. However, acetate stabilised the SmC phase at the expense of the SmA phase. Based on temperature-dependant XRD measurements, a bilayer structure was proposed.

Micellization Behavior of Long-Chain Substituted Alkylguanidinium Surfactants.

Surface activity and micelle formation of alkylguanidinium chlorides containing 10, 12, 14 and 16 carbon atoms in the hydrophobic tail were studied by combining conductivity and surface tension measurements with isothermal titration calorimetry. The purity of the resulting surfactants, their temperatures of Cr→LC and LC→I transitions, as well as their propensity of forming birefringent phases, were assessed based on the results of 1H and 13C NMR, differential scanning calorimetry (DSC), and polarizing microscopy studies. Whenever possible, the resulting values of Krafft temperature (TK), critical micelle concentration (CMC), minimum surface tension above the CMC, chloride counter-ion binding to the micelle, and the standard enthalpy of micelle formation per mole of surfactant (ΔmicH°) were compared to those characterizing alkyltrimethylammonium chlorides or bromides with the same tail lengths. The value of TK ranged between 292 and 314 K and increased strongly with the increase in the chain length of the hydrophobic tail. Micellization was described as both entropy and enthalpy-driven. Based on the direct calorimetry measurements, the general trends in the CMC with the temperature, hydrophobic tail length, and NaCl addition were found to be similar to those of other types of cationic surfactants. The particularly exothermic character of micellization was ascribed to the hydrogen-binding capacity of the guanidinium head-group.

Liquid crystalline guanidinium phenylalkoxybenzoates: towards room temperature liquid crystals via bending of the mesogenic core and the use of triflate counter ions

A series of guanidinium salts 1(C n ) m –4(C n ) m X bearing phenyl alkoxybenzoate cores have been synthesised and their mesomorphic properties have been investigated by polarising optical microscopy (POM), differential scanning calorimetry (DSC) and powder X-ray diffraction experiments (small-angle X-ray scattering and wide-angle X-ray scattering). While compounds 1(C12)1 X and 3(C12)1 X with one alkoxy chain showed smectic A (SmA) phases irrespective of the counter ion, compounds 1(C12)2 OTf and 3(C12)2 OTf with two alkoxy chains displayed SmA phases and the corresponding chlorides 1(C12)2 Cl and 3(C12)2 Cl displayed Colh. Guanidinium salts 1(C n )3–4(C n )3 X with three alkoxy chains showed Colh phases. Whereas the use of cyclic guanidinium head groups rather than acyclic ones had only a minor influence on the mesophase properties, melting points were significantly decreased by bent core units instead of linear core units. Replacement of chloride counterions by triflate lead to a further depression of the clearing points and shifted the mesophase towards room temperature.

Alkali resistant and conductive guanidinium-based anion-exchange membranes for alkaline polymer electrolyte fuel cells

Novel alkaline anion-exchange membranes (AAEMs) containing pendant guanidinium groups are synthesized from poly(2, 6-dimethyl-1,4-phenylene oxide) (PPO) by benzyl bromination and subsequent reaction with 1,1,2,3,3-pentamethylguanidine (PMG). The performances of the resultant guanidinium-functionalized-PPO (GPPO) AAEMs are controlled by tailoring the amount of guanidinium groups in the membrane matrix. The AAEMs exhibit high ionic conductivities (up to 71 mS cm−1 at room temperature); this stems from the high alkalinity (high pKa) of guanidinium hydroxide, which leads to an augmentation of both the number of dissociated hydroxides and water molecules. Furthermore, the GPPO AAEMs exhibit excellent thermal and alkali stabilities due to the presence of the π electron conjugated systems of the pendant guanidinium head-groups permitting the positive charge to be delocalized over one carbon and three nitrogen atoms. Specifically, the initial decomposition temperatures, from thermogravimmetric analyses of the GPPO AAEMs, are high at 270 °C, while the hydroxide conductivity of the AAEM with the most optimal properties remains stable in aqueous KOH (1 mol dm−3) solution for 192 h at 25 °C. A H2/O2 fuel cell test at 50 °C with a GPPO AAEM yielded a beginning-of-life peak power density of 16 mW cm−2.

Dimeric Calixarenes: A New Family of Major‐Groove Binders

A new class of potent DNA binding agents is presented. Dimeric calix[4]arenes with cationic groups at their upper rims and flexible alkyl bridges can be synthesized from triply acyl-protected calix[4]arene tetramines in relatively short synthetic sequences (3-5 steps). The compounds attach themselves to double-stranded nucleic acids in a noncovalent fashion, with micro- to nanomolar affinities. Guanidinium headgroups with their extended hydrogen-bonding "fingers" are more powerful than ammonium groups, and the benzylamine series is superior to the anilinium series (see below). The new ligands easily distinguish between RNA and various DNA types, and produce characteristic changes in UV/Vis, fluorescence, CD, as well as NMR spectra. Especially extended oligonucleotides of more than 100 base pairs are bound with affinities increasing from RNA (10 μM K(d))<AT-rich (1 μM)<GC-rich DNA double strands (100-10 nM). Ethidium bromide displacement studies confirm this order. CE(50) values are remarkably low (1-4 μM), and are more than 300 times lower than that of spermine, which is a typical backbone binder. Stoichiometries are rather high (one calixarene dimer per two BP), suggesting a potential aggregation of bound ligands inside the major groove. Most UV/Vis melting curves display an inverted shape, and start from drastically enhanced absorption intensities for the DNA complexes. DAPI displacement studies prove that up to one equivalent of calixarene dimer can be accommodated in the dye-loaded DNA. RNA complexation by calixarene dimers is accompanied by a drastic CD spectral transition from the typical A-form to a perfect B-signature, providing further experimental evidence for major-groove binding. The orientation of the ligands can be deduced from NMR titrations and is reproduced in Monte-Carlo simulations on 1:1 complexes in water.

The Structural Basis for Substrate Recognition by Mammalian Polynucleotide Kinase 3′ Phosphatase

Mammalian polynucleotide kinase 3' phosphatase (PNK) plays a key role in the repair of DNA damage, functioning as part of both the nonhomologous end-joining (NHEJ) and base excision repair (BER) pathways. Through its two catalytic activities, PNK ensures that DNA termini are compatible with extension and ligation by either removing 3'-phosphates from, or by phosphorylating 5'-hydroxyl groups on, the ribose sugar of the DNA backbone. We have now determined crystal structures of murine PNK with DNA molecules bound to both of its active sites. The structure of ssDNA engaged with the 3'-phosphatase domain suggests a mechanism of substrate interaction that assists DNA end seeking. The structure of dsDNA bound to the 5'-kinase domain reveals a mechanism of DNA bending that facilitates recognition of DNA ends in the context of single-strand and double-strand breaks and suggests a close functional cooperation in substrate recognition between the kinase and phosphatase active sites.

P-Alkoxybiphenyls with guanidinium head groups displaying smectic mesophases

Novel calamitic guanidinium salts with p-alkoxybiphenyl or p-alkoxyphenyl core unit (7, 11, 12) have been synthesised, utilising the corresponding nitro compounds as synthetic intermediates. Differential scanning calorimetry (DSC), polarising optical microscopy (POM) and temperature-dependent X-ray diffraction studies reveal smectic A (SmA) mesophases for all series. Whereas the p-alkoxybiphenyl guanidinum chlorides 7 display SmA phases with a minimum chain lengths of C8 and broad mesophase width from 80°C (for C8 derivative 7b) up to 180°C (for C16 derivative 7g), the corresponding p-alkoxyphenyl guanidinium chlorides 11 display much smaller mesophase width from 4°C (for C10 derivative 11c) up to 72°C (for C16 derivative 11e). For the series 12 a large influence of the anion on the clearing point is observed, with clearing points ranging from 209°C for the guanidinium chloride 7f down to 127°C for guanidinium hexafluorophosphate 12d.

Vivo-Morpholinos: A Non-Peptide Transporter Delivers Morpholinos into a Wide Array of Mouse Tissues

We have developed a new transporter structure that provides effective delivery of Morpholino antisense oligomers into a wide variety of tissues in living mice. This transporter comprises a dendritic structure assembled around a triazine core which serves to position eight guanidinium head groups in a conformation effective to penetrate cell membranes. This transporter structure is conjugated to a Morpholino oligomer to form a delivery-enabled product referred to as a Vivo-Morpholino. Vivo-Morpholinos are shown to effectively enter and function within cultured cells in the presence of 100% serum using a rigorous positive test system based on correction of a defined splicing error in a pre-messenger RNA. In addition, Vivo-Morpholinos are demonstrated to enter into a wide variety of tissues in a similar positive test system in transgenic mice, as evidenced by correction of the targeted splicing error in all tissues assessed, including near-complete splice correction in the small intestine, colon, stomach, liver kidney, and a number of muscles. Finally, Vivo-Morpholinos, which target the exon-skipping of exon 23 harboring a premature termination codon in the mdx mouse model, effectively restore the reading frame of dystrophin and restore expression of a functional dystrophin protein.

Design and Synthesis of Dendritic Molecular Transporter that Achieves Efficient in Vivo Delivery of Morpholino Antisense Oligo

Safe and efficient in vivo delivery of Morpholino antisense oligos was probably the last and most difficult challenge for the broad application of antisense in animal research and therapeutics. Several arginine-rich peptides effective for in vivo delivery of Morpholino antisense oligos require rather complex and expensive procedures for synthesis and conjugation. This work describes the design and synthesis of a dendritic transporter in a most concise manner where the selection of the core scaffold, functional group multiplication, orthogonal protecting group manipulation, solid phase conjugation, and off-resin perguanidinylation of the transporter structure are all orchestrated for efficient assembly. We utilized triazine as a core to provide a site for on-column conjugation to the Morpholino oligo and to anchor functional side arms which, after extension, multiplication, and deprotection, are subsequently converted from primary amines to the eight guanidinium headgroups that serve for transport across cell membranes. Intravenous administration of the delivery-enabled Morpholino into a splice-reporter strain of transgenic living mice results in de novo expression of splice-corrected green fluorescent protein in a broad range of tissues and organs in those treated mice. This rigorously demonstrates that this new dendritic transporter achieves effective delivery of a Morpholino oligo into the cytosol/nuclear compartment of cells systemically in vivo. The practical conjugation process may overcome any availability limitation for routine use by the scientific community, and the efficient delivery ability of this transporter may advance the application of Morpholino antisense technology in animals.

Crystal structure of ADP/AMP complex of Escherichia coli adenylate kinase

Crystal structure of ADP/AMP complex of <i>Escherichia coli</i> adenylate kinase

Design, Syntheses, and Transfection Biology of Novel Non-Cholesterol-Based Guanidinylated Cationic Lipids

The design of efficacious cationic transfection lipids with guanidinium headgroups is an actively pursued area of research in nonviral gene delivery. Herein, we report on the design, syntheses, and gene transfection properties of six novel non-cholesterol-based cationic amphiphiles (1-6) with a single guanidinium headgroup in transfecting CHO, COS-1, MCF-7, A549, and HepG2 cells. The in vitro gene transfer efficiencies of lipids 1-6 were evaluated using both the reporter gene and the whole cell histochemical X-gal staining assays. The efficiencies of lipids 1-3, in particular, were found to be about 2- to 4-fold higher than that of commercially available LipofectAmine in transfecting COS-1, CHO, A-549, and MCF-7 cells. However, the relative transfection efficiencies of lipids 1-3 and LipofectAmine were found to be comparable in HepG2 cells. Cholesterol was found to be a more efficacious co-lipid than dioleoyllphosphatidyl ethanolamine (DOPE). In general, lipids 1-3 containing the additional quaternized centers were observed to be more transfection efficient than lipids 4-6 with less positive headgroups. MTT-assay-based cell viability measurements in representative CHO cells revealed high (>75%) cell viabilities of lipids 1-6 across the lipid/DNA charge ratios 0.1:1 to 3:1. Electrophoretic gel patterns observed in DNase I protection experiments support the notion that enhanced degradation of DNA associated with lipoplexes of lipids 4-6 might play some role in diminishing their in vitro gene transfer efficacies. Size and global surface charge measurement by a dynamic laser light scattering instrument equipped with zeta-sizing capacity revealed the nanosizes and surface potentials of both the transfection efficient and the incompetent lipoplexes to be within the range of 200-600 nm and +3.4 to -34 mV, respectively. To summarize, given the feasibility of a wide range of structural manipulations in the headgroup regions of non-cholesterol-based cationic amphiphiles, our present findings are expected to broaden the potential of cationic amphiphiles with guanidinium headgroups for use in nonviral gene therapy.

Role of membrane potential and hydrogen bonding in the mechanism of translocation of guanidinium-rich peptides into cells.

The results described herein support a mechanistic hypothesis for how guanidine-rich transporters attached to small cargos (MW ca. <3000) can migrate across the lipid membrane of a cell and directly enter the cytosol. Arginine oligomers are found to partition almost completely into the aqueous layer of a water-octanol bilayer. However, when the same partitioning experiment is conducted in the presence of sodium laurate, a representative negatively charged membrane constituent, the arginine oligomer partitions almost completely (>95%) into the octanol layer. In contrast, ornithine oligomers partition almost exclusively into the water layer with and without added sodium laurate. The different partitioning between guanidinium-rich and ammonium-rich oligomers in the presence of sodium laurate is consistent with the ability of the former to form a bidentate hydrogen bonded ion pair. Mono- and dimethylated arginine oligomers, which like ornithine can only efficiently form monodentate hydrogen bonds, were prepared and found to exhibit poor cellular uptake. Ion pair formation converts a once water-soluble agent to a lipid-soluble agent, thereby reducing the energetic penalty for passage of guanidine-rich transporters through the lipid bilayer. Uptake of guanidine-rich transporters is known to be an energy-dependent process, and this requirement for cellular ATP is now rationalized by the inhibition of guanidine-rich transporter uptake in the presence of agents that reduce the membrane potential. Specifically, incubation of cells in buffers with high potassium ion concentrations or pretreatment of cells with gramicidin A reduces the cellular uptake of Fl-aca-arg8-CONH2 by >90%. Furthermore, the reciprocal experiment of hyperpolarizing the cell with valinomycin increased uptake by >1.5 times. In summary, we propose that the water-soluble, positively charged guanidinium headgroups of the transporter form bidentate hydrogen bonds with H-bond acceptor functionality on the cell surface. The resultant ion pair complexes partition into the lipid bilayer and migrate across at a rate related to the membrane potential. The complex dissociates on the inner leaf of the membrane, and the transporter enters the cytosol. This hypothesis does not preclude uptake by other mechanisms, including endocytosis, which is likely to dominate with large cargos.

Molecular Recognition of Nucleotides by the Guanidinium Unit at the Surface of Aqueous Micelles and Bilayers. A Comparison of Microscopic and Macroscopic Interfaces

Molecular recognition of the guanidinium/phosphate pair was investigated at microscopic interfaces of aqueous micelles and bilayers. Monoalkyl and dialkyl amphiphiles with guanidinium head groups were synthesized and dispersed in water to form micelles and bilayers having guanidinium groups at the aggregate surface. Binding of nucleotides such as AMP to these functionalized aggregates was evaluated by using an equilibrium dialysis (ultrafiltration) method. The observed binding constants of 102−104 M-1 are much larger than the corresponding binding constant reported for a monomerically dispersed pair in the aqueous phase (1.4 M-1) but are smaller than those found at the macroscopic air−water interface (106−107 M-1). Therefore, the macroscopic interface promotes guanidinium−phosphate interaction more effectively than the microscopic interface. The present finding indicates that the microscopic interface can strengthen hydrogen bonding and/or electrostatic interaction even in the presence of water. Saturatio...

Multi-site Recognition of Flavin Adenine Dinucleotide by Mixed Monolayers on Water

Abstract Flavin adenine dinucleotide (FAD) formed a stoichiometric complex at the air-water interface with four molecules of a three-component monolayer that contain guanidinium, diaminotriazine, and orotate head groups. The complementary complexation was confirmed by surface pressure-area isotherm and IR and XPS spectroscopies of the transferred film.