Growth Requirements Research Articles

The Effect of Copper Limitation on the Bioavailability of Cu-Organic Complexes.

We examined the bioavailability of synthetic organic Cu complexes (Cu-L) and inorganic Cu species (Cu') to Thalassiosira oceanica growing under Cu-limiting and Cu-inhibiting conditions. Copper bioavailability depended on the phytoplankton Cu nutritional state and whether Cu' diffusion to the cell surface was sufficient to meet the cellular demands for growth. Under Cu-limiting conditions when [Cu'] was less than the diffusion concentration threshold (DCT: 10-14.13 M), growth rate was a hyperbolic function of [Cu-L]. Increasing [Cu'] above the DCT caused growth rate to increase proportionally, but growth rate also increased with increasing [Cu-L] so that both Cu' and Cu-L were bioavailable. Short-term photosynthesis assays conducted under Cu-limiting conditions showed a similar response to Cu speciation. In contrast, the growth rate of Cu-inhibited cells at high [Cu'] varied inversely with [Cu2+] and was independent of [Cu-L], as previously reported. The change in Cu-L bioavailability correlated with expression levels of genes encoding the reduction-dependent, high-affinity Cu uptake pathway, which was regulated by [Cu']. Our analysis shows that at [Cu'] typical of the open sea, T. oceanica-like phytoplankton are diffusion limited and must rely on Cu-organic complexes to fulfill their Cu requirements for growth.

Breast cancer cells promote osteoclast differentiation in an MRTF-dependent paracrine manner.

Bone is a frequent site for breast cancer metastasis. The vast majority of breast cancer-associated metastasis is osteolytic in nature, and RANKL (receptor activator for nuclear factor κB)-induced differentiation of bone marrow-derived macrophages (BMDMs) to osteoclasts (OCLs) is a key requirement for osteolytic metastatic growth of cancer cells. In this study, we demonstrate that Myocardin-related transcription factor (MRTF) in breast cancer cells plays an important role in paracrine modulation of RANKL-induced osteoclast differentiation. This is partly attributed to MRTF's critical role in maintaining the basal cellular expression of connective tissue growth factor (CTGF), findings that align with a strong positive correlation between CTGF expression and MRTF-A gene signature in the human disease context. Luminex analyses reveal that MRTF depletion in breast cancer cells has a broad impact on OCL-regulatory cell-secreted factors that extend beyond CTGF. Experimental metastasis studies demonstrate that MRTF depletion diminishes OCL abundance and bone colonization breast cancer cells in vivo, suggesting that MRTF inhibition could be an effective strategy to diminish OCL formation and skeletal involvement in breast cancer. In summary, this study highlights a novel tumor-extrinsic function of MRTF relevant to breast cancer metastasis.

Integrating genomic evidence for an updated taxonomy of the bacterial genus Spiribacter

The genus Spiribacter encompasses halophilic bacteria widely distributed in hypersaline environments worldwide. Despite their ecological significance, initially isolating Spiribacter species under laboratory settings was challenging due to the lack of knowledge of their growth and cultivation requirements. However, with improved understanding of their ecological niche and metabolic pathways, additional species of Spiribacter have been successfully isolated and identified from diverse locations around the globe. Enriched media with sodium pyruvate as carbon source facilitated the isolation of twelve new strains closely related to the genus Spiribacter from hypersaline environments in Spain. Genome sequencing and analysis of these new strains and previously described Spiribacter species provided insights into their genomic features and phylogenomic relationships, supporting the delineation of three distinct new species within this genus, designated as Spiribacter insolitus sp. nov., Spiribacter onubensis sp. nov., and Spiribacter pallidus sp. nov. In Spiribacter species, streamlined genomes enhance survival in hypersaline environments by reducing non-essential genes and optimizing resource utilization. Key genes involved in osmoprotectant mechanisms, including those for the metabolism of myo-inositol, hydroxyproline, and L-proline, were identified and numerous transporters were noted, ensuring efficient nutrient acquisition and osmotic balance. Notably, these new species, along with other Spiribacter strains, exhibit metabolic diversity in utilizing inorganic sulfur compounds, including thiosulfate and tetrathionate, for energy production and adaptation to hypersaline environments. The presence of thiosulfate dehydrogenase (TsdA) genes suggests their capability to oxidize thiosulfate to tetrathionate, potentially influencing both aerobic and anaerobic respiration. Furthermore, the prevalence of the sqr gene indicates a role for sulfide oxidation in Spiribacter metabolism, underlining their metabolic versatility in saline habitats. These adaptations allow Spiribacter to thrive in nutrient-limited, high-salinity habitats. Moreover, genome mining analysis and physiological disparities observed in the already described species Spiribacter halobius raise significant challenges to its classification within the genus Spiribacter.

Laboratory Experiments Suggest a Limited Impact of Increased Nitrogen Deposition on Snow Algae Blooms.

Snow algal blooms decrease snow albedo and increase local melt rates. However, the causes behind the size and frequency of these blooms are still not well understood. One factor likely contributing is nutrient availability, specifically nitrogen and phosphorus. The nutrient requirements of the taxa responsible for these blooms are not known. Here, we assessed the growth of three commercial strains of snow algae under 24 different nutrient treatments that varied in both absolute and relative concentrations of nitrogen and phosphorus. After 38 days of incubation, we measured total biomass and cell size and estimated their effective albedo reduction surface. Snow algal strains tended to respond similarly and achieved bloom-like cell densities over a wide range of nutrient conditions. However, the molar ratio of nitrogen to phosphorus at which maximum biomass was achieved was between 4 and 7. Our data indicate a high requirement for phosphorus for snow algae and highlights phosphorus availability as a critical factor influencing the frequency and extent of snow algae blooms and their potential contribution to snow melt through altered albedo. Snow algae can thrive across a range of nitrogen (N) and phosphorus (P) conditions, with a higher P requirement for optimal growth. Our study suggests that increased N deposition may have a limited impact on snow algae bloom occurrence and size, emphasising P as a key factor influencing these blooms and their potential to accelerate snow melt by lowering albedo.

Kombinasi Metode AHP dan TOPSIS dalam Pemilihan Bibit Cabai Berdasarkan Kondisi Tanah dan Syarat Tumbuh Tanaman

Selecting plant seeds suitable for environmental conditions is crucial for enhancing agricultural productivity. This research aims to develop an effective approach for selecting chili seeds based on plant growth requirements. The Analytic Hierarchy Process (AHP) and Technique for Order of Preference by Similarity to Ideal Solution (TOPSIS) methods are employed to address the complexity of multi-criteria decision-making. The first step involves identifying relevant criteria, including soil type, elevation, optimal soil pH, and light intensity. Subsequently, the relative weights of each criterion are determined using the AHP method to consider the significance of each factor in seed selection. Then, utilizing TOPSIS, chili seeds are evaluated based on their relative closeness to the positive ideal solution (seeds with optimal soil conditions and fulfilled plant growth requirements) and the negative ideal solution (seeds with substandard soil conditions and unmet plant growth requirements). The outcome of this research can assist farmers in choosing chili seeds that match soil conditions and plant growth requirements effectively.

Early preventive services in Germany-perspectives for future development

The future development of early preventive services and intervention depends on structural anchoring, the resources of the professionals working in the field, and utilization and acceptance by the target population. In order to understand the dynamics of the development, this discussion contribution first presents the contemporary historical origins of early intervention in Germany since the beginning of the 20thcentury. Further sections bring together the bodies of knowledge from various relevant sciences, in particular neuroscientific findings on the early childhood development of the brain, attachment theory, results of family and prevention research, trauma studies, and health economic models on the benefits of social interventions. From this, requirements for the further growth of the early intervention system are derived. These can be conceptually classified as a"Health in all Policies" strategy (with aparticular focus on combating child poverty) combined with interprofessional learning and collaboration, inclusive access for all children, and diversity-friendliness as characteristics of good process quality. To further develop and expand early interventions, proof of benefits must be carefully planned and implemented through long-term, interdisciplinary research programs in the aforementioned fields of knowledge through independent research funding. The complex methods for evaluating complex interventions at the individual level, subgroups, and the entire population, including health economic effects and participatory and qualitative empirical research, are partly available and should be further developed.

Nutrient mediation of sink strength in the Orobanche minor – Red clover association

Holoparasites are non-photosynthetic plants which derive all their growth requirements from their host plant and are thought to act as a very strong sink for host resources. Here, we grew red clover plants in split-root boxes to explore the effect of nutrient supply to Orobanche minor parasitized or unparasitized host roots. Where nutrients were supplied to parasitized roots, parasite growth was strongly promoted at the expense of the host. Conversely, host growth did not differ significantly from unparasitized controls where nutrients were supplied to unparasitized roots. While 15N labelling suggested both strong parasitic ammonium abstraction and reduced nitrate uptake in parasitized roots, the total N content of systems where nutrients were fed to parasitized roots was approximately 26 % higher than control plants, suggesting that changes in host and parasite growth rates were due to changes in sink strength, rather than nutrient uptake. Parasitism and nutrient supply had strong effects on leaf carbohydrate metabolism but did not affect photosynthetic rates or leaf N concentration. In the second experiment, we investigated the importance of light level on the host – parasite relationship, concluding that parasitism had a diminished effect on host growth under low light conditions. Total system mass was unaffected by the apparent sink strength of the parasite. Our results suggest a dynamic relationship between host shoot and parasite sink strengths, mediated by changes in nutrient status.

Comparison of suckling and artificial rearing on calf growth and milk requirements in pastoral dairy systems

Context Dairy calf-rearing practises have the potential to influence profitability through milk requirements at rearing, and affect lifetime productivity and market access from an animal-welfare perspective. Aims The aim of this research was to compare calf growth and milk requirements by using conventional artificial rearing (AR) and restricted milk allocation with AR and high milk allocation or suckled calves. Methods Forty-five Friesian × Jersey calves were allocated to be either AR on 6 L/calf.day, (ARC) or 12 L/calf.day, (ARH), or suckled with dams in a cow–calf contact system using partial contact (15 h/day, CCC). AR calves were fed, and intake measured, using an automatic feeder, whereas CCC calves had access to their dams between 1500 hours and 0600 hours. Calves were transitioned off milk, once they reached at least 75 kg liveweight (LW), by gradually reducing their milk allocation (AR) or reducing access to their dam (CCC). Key results Milk consumption for ARH was greater than for ARC calves (382 vs 450 L/calf, P < 0.05), whereas for CCC calves milk-yield difference between dams for the control and suckling groups during the suckling period and over the full season was 706 and 1048 L/cow respectively. There was no difference in weaning weight of calves (87 ± 1.7 kg LW), but, owing to differences in pre-weaning growth rate, age to weaning was youngest (P < 0.05) for CCC (55 days), followed by ARH (62 days) and ARC (73 days). Respective growth rates between birth and weaning (P < 0.001) for CCC, ARH and ARC calves were 0.955, 0.873 and 0.755 ± 0.028 kg/day. Although there was a growth check among CCC calves during the weaning period, there were no post-weaning differences in growth rate among the groups. Conclusions Increasing milk allowance had the benefit of improving calf pre-weaning growth rate, giving the option of weaning calves either earlier or when heavier. However, milk yield losses under suckling systems may be too high to warrant the elevated pre-weaning growth of calves. Implications The costs–benefits of high milk allocation or suckling systems need to be ascertained over the lifetime of the animals to assess long-term survival and productivity outcomes.

Elevated hospital floor-based HDU (POPUP-HDU): a new safe alternative to PICU for high-risk neuromuscular and syndromic children undergoing scoliosis surgery.

Children undergoing either posterior spinal fusion (PSF) or index insertion of growing rods for neuromuscular or genetic/syndromic scoliosis may require post-operative care on the paediatric intensive care unit (PICU). Demands on this limited resource result in frequent bed shortage related cancellations. In response, an ad-hoc or 'pop-up' ward-based high-dependency unit (POPUP-HDU) was developed. This converts a ward bed to POP-HDUbed for the required time. This study assesses the safety and efficacy of postoperative management that utilises POPUP-HDU as an alternative to a PICU bed. Retrospective review of 111 consecutive children undergoing posterior surgery for scoliosis between June 2016 and April 2023. The inclusion criteria included a diagnosis of genetic/syndromic or neuromuscular scoliosis; PSF or primary insertion of distraction-based growth rods and requirement for postoperative care in a PICU. We excluded those children that were mandated to go to PICU post-operatively for any reason by the anaesthetic team. 49 patients (mean age 13.0years) were managed on PICU, and 62 (mean age 11.4years) on POPUP-HDU. The groups were matched with respect to body weight, curve magnitude, operative duration, type of fusion procedure performed, the presence of cardiac malformations, the use of home breathing support, the number of operated levels, pelvic instrumentation and intraoperative blood loss. 8 patients in the PICU, and 16 in the POP-HDU groups were readmitted back to PICU following step-down to the hospital ward (p = 0.27). The median PICU length of stay was 1day in the PICU group and less than a day in POPUP-HDU (for those that needed to be subsequently admitted to PICU). The median total length of hospital stay was 10days in the PICU group, and 8days in POPUP-HDU (p < 0.05). 14 patients developed medical complications in the PICU group, compared to 19 in POPUP-HDU. There were no bedshortage cancellations in POPUP-HDU, compared to 23 in PICU. For children with neuromuscular, genetic or syndromic scoliosis undergoing PSF or growth rods that are not deemed suitable for immediate ward-level post-operative care, POPUP-HDU provided a safe alternative to PICU for appropriate patients and was associated with shorter hospital stay and fewer cancellations for lack of PICU beds. Therapeutic Level III.

Site of breast cancer metastasis is independent of single nutrient levels.

Cancer metastasis is a major contributor to patient morbidity and mortality1, yet the factors that determine the organs where cancers can metastasize are incompletely understood. In this study, we quantify the absolute levels of over 100 nutrients available across multiple tissues in mice and investigate how this relates to the ability of breast cancer cells to grow in different organs. We engineered breast cancer cells with broad metastatic potential to be auxotrophic for specific nutrients and assessed their ability to colonize different organs. We then asked how tumor growth in different tissues relates to nutrient availability and tumor biosynthetic activity. We find that single nutrients alone do not define the sites where breast cancer cells can grow as metastases. Additionally, we identify purine synthesis as a requirement for tumor growth and metastasis across many tissues and find that this phenotype is independent of tissue nucleotide availability or tumor de novo nucleotide synthesis activity. These data suggest that a complex interplay of multiple nutrients within the microenvironment dictates potential sites of metastatic cancer growth, and highlights the interdependence between extrinsic environmental factors and intrinsic cellular properties in influencing where breast cancer cells can grow as metastases.

Recent Advances in the Glycolytic Processes Linked to Tumor Metastasis.

The main cause of cancer-related fatalities is cancer metastasis to other body parts, and increased glycolysis is crucial for cancer cells to maintain their elevated levels of growth and energy requirements, ultimately facilitating the invasion and spread of tumors. The Warburg effect plays a significant role in the advancement of cancer, and focusing on the suppression of aerobic glycolysis could offer a promising strategy for anti-cancer treatment. Various glycolysis processes are associated with tumor metastasis, primarily involving non-coding RNA (ncRNAs), signaling pathways, transcription factors, and more. Various categories of noncoding RNAs, including microRNAs (miRNAs), long noncoding RNAs (lncRNAs), and circular RNAs (circRNAs), have shown promise in influencing glucose metabolism associated with the spread of tumors. Additionally, circular RNAs (circRNAs) and long non-coding RNAs (lncRNAs) predominantly act as competitive endogenous RNAs (ceRNAs) by sequestering microRNAs, thereby modulating the expression of target genes and exerting significant influence on the metabolic processes of cancerous cells. Furthermore, the process of tumor metastasis through glycolysis also encompasses various signaling pathways (such as PI3K/AKT, HIF, Wnt/β- Catenin, and ERK, among others) and transcription factors. This article delineates the primary mechanisms through which non-coding RNAs, signaling pathways, and transcription factors contribute to glycolysis in tumor metastasis. It also investigates the potential use of these factors as prognostic markers and targets for cancer treatment. The manuscript also explores the innovative applications of specific traditional Chinese medicine and clinical Western medications in inhibiting tumor spread through glycolysis mechanisms, offering potential as new candidates for anti-cancer drugs.

Chlorella-enriched hydrogels protect against myocardial damage and reactive oxygen species production in an in vitro ischemia/reperfusion model using cardiac spheroids

Microalgae have emerged as promising photosynthetic microorganisms for biofabricating advanced tissue constructs, with improved oxygenation and reduced reactive oxygen species (ROS) production. However, their use in the engineering of human tissues has been limited due to their intrinsic growth requirements, which are not compatible with human cells. In this study, we first formulated alginate-gelatin (AlgGel) hydrogels with increasing densities ofChlorella vulgaris. Then, we characterised their mechanical properties and pore size. Finally, we evaluated their effects on cardiac spheroid (CS) pathophysiological response under control and ischemia/reperfusion (I/R) conditions. Our results showed that the addition ofChlorelladid not affect AlgGel mechanical properties, while the mean pore size significantly decreased by 35% in the presence of the 107cells ml-1microalgae density. Under normoxic conditions, the addition of 107Chlorellacells ml-1significantly reduced CS viability starting from 14 d in. No changes in pore size nor CS viability were measured for hydrogels containing 105and 106Chlorellacells ml-1. In our I/R model, allChlorella-enriched hydrogels reduced cardiac cell sensitivity to hypoxic conditions with a corresponding reduction in ROS production, as well as protected against I/R-induced reduction in cell viability. Altogether, our results support a promising use ofChlorella-enriched Alg-Gel hydrogels for cardiovascular tissue engineering.

Primary productivity regulates rhizosphere soil organic carbon: Evidence from a chronosequence of subtropical Chinese fir (Cunninghamia lanceolata) plantation

Tree plantations worldwide are a large terrestrial carbon sink. Previous studies on the carbon sequestration capacity of plantations mainly focused on tree biomass carbon sequestration, but the importance of soil organic carbon (SOC) was relatively unclear. Living root carbon inputs influence SOC via plant-microbe interactions in the rhizosphere and play an essential role in nutrient cycling. Here, we compared SOC, including its fractions, microbial properties, and major nutrients in rhizosphere and bulk soils, and examined their relationships to net primary productivity (NPP) across three developmental stages of Chinese fir (Cunninghamia lanceolata) plantations (6, 18, and 42 years old) in subtropical China. Although NPP differed among the three plantations, SOC concentration in bulk soils did not vary significantly among them. However, SOC concentration and labile C pool I and recalcitrant C pool in rhizosphere soils were significantly (p < 0.05) higher in the young (6-year) and mature (42-year) plantations, both of which had lower (p < 0.05) NPP (−37.71 % and − 42.67 %) compared to the middle-aged (18-year) plantation, suggesting a decoupling of NPP from rhizosphere SOC in the plantations. The decoupling of NPP from rhizosphere SOC concentrations may be driven by nitrogen (N) and phosphorus (P) tree growth requirements, belowground C allocation, and resultant microbial activity in this highly weathered subtropical soil. Our study provides field-based evidence suggesting that rhizosphere SOC changes are primarily regulated by net primary production in subtropical forest plantations. We propose that accurate predictions of SOC dynamics in forest plantations require an improved understanding of rhizosphere processes during plantation development.

Do cooking techniques influence copper bioaccesibility in foods after in vitro digestion/fermentation in adults and children?

Cu is essential for the growth and organism health. Classically, its available fraction has been studied by in vitro digestion studies as a measure of bioaccessibility of Cu (Cu-BA). In this work we applied a novel in vitro digestion/fermentation method to multiple foods subjected to different home cooking techniques (raw form vs. frying, roasting, toasting, boiling and grilling) by metabolization with faecal inoculate from healthy adults (HE-AD), and healthy children (HE-CH) and sick children (children with gluten related disorders, GRD-CH; children with obesity, OB-CH; and children with allergy/intolerance to cow’s milk proteins, AICM-CH). In raw and cooked foods the bioaccessibility of Cu in the small intestine (Cu-BASI) was higher vs. that in the Cu bioaccessibility in the large intestine (Cu-BALI) (30.8 ± 15.4 and 28.2 ± 14.7 vs. 18.4 ± 21.2 and 22.8 ± 22.1 %, respectively; p < 0.001). Total Cu-BA in cooked foods (51.0 ± 24.4 %) was higher than that in raw foods (49.0 ± 25.1 %). In cereals, total Cu-BA was higher in the raw form, as well as in whole grains and those with gluten (p < 0.05). In vegetables, the most drastic cooking techniques (roasting and frying) show higher values of total Cu-BA compared to raw form and boiling. The Cu-BALI in HE-CH (37.7 ± 23.7 %) is higher than that determined in HE-AD (14.1 ± 18.5 %) and sick children (GRD-CH: 14.6 ± 19.8; OB-CH: 15.5 ± 17.8; and AICM-CH: 26.9 ± 19.3 %; p < 0.001). In conclusion, cooking techniques influence Cu-BA depending on the food group. Total Cu-BA, as well as that determined in the large and small intestine varied according to the category, group and specific foods, which is related to their different composition and species of the element. In healthy children, total Cu-BALI is higher than in adults and celiac, obese and allergic children probably due to growth requirements and specific microbiota.

Evaluation of storage stability of poultry by-product meal incorporated fish feed under aerobic storage condition

The research focused on development of fish feed utilising poultry by-product meal (PBM) as a substitute for fish meal (FM) and evaluating its shelf life under aerobic packaging conditions. Initially, a basal diet (C) was formulated to meet the nutritional requirements for optimal growth of Tilapia by using FM as the major protein source. After analysing the nutritional composition of PBM, an isoproteinaceous diet (T) was formulated by replacing FM with PBM. The product was packed in HDPE bags and kept at room temperature and analysed for physico chemical and microbial characteristics for 45 days at weekly intervals. Moisture content of both C and T decreased significantly (p0.05) was found between C and T. The TBARS value of both C and T followed an increasing trend. This increase in C was not significant (p&lt;0.01) between 28th and 35th day, and between 42nd and 45th day but that of T increased significantly (p&lt;0.01) throughout the storage period. T consistently displayed the highest TBARS value during storage period. Tyrosine Value (TV) of both C and T also increased during storage and was significant (p&lt;0.01) up to 42nd day of storage. C exhibited the highest TV throughout the storage period. Similarly, total viable count (TVC) of both C and T increased on storage. The increase in TVC for C was not significant (p&lt;0.01) between 21st and 28th days, whereas that of T was significant (p&lt;0.01) throughout the storage period. On 45th day, T exhibited highest count and was significantly different (p&lt;0.01) from C. Throughout the 45-day storage period, no observable coliform count or yeast and mould count was noted in either C or T. The present study indicated that fish feed can be effectively prepared by utilising PBM and can be stored under room temperature up to 45 days. Keywords: Poultry by-product meal, fish meal, fish feed, storage stability

Analisis Faktor-Faktor Kinerja Operasional Pemeliharaan Aset Fisik Pengolahan Instalasi Air Limbah di Kota Sungai Penuh

Infrastructure Assets and Facilities are basic requirements for economic development and growth, both are not simple objects and require huge costs. In addition, the relationship between the two with the aspect of election is very important. Because there is no maintenance of the physical assets of communal WWTP in Sungai TFull City, often the units on the WWTP are damaged so that it can hinder the wastewater treatment process. The less optimal performance of WWTP is influenced by human resources, machinery and equipment, as well as problems in the series of WWTP processes. The research method that is used is a quantitative method with the distribution of questionnaires to the respondents involved. The purpose of this study is to identify the factors and dominant factors of the operational performance of the maintenance of physical assets of wastewater treatment plants in Sungai TFull City, as well as to provide strategic strategies to improve the maintenance operations of physical assets of wastewater treatment plants in Sungai TFull City. The results of the research conducted are 5 factors in the operational performance of the maintenance of physical assets of wastewater treatment plants in Sungai TFull City, which consists of cost factors, human resource factors, work method factors, and equipment factors.

Influence of climate change on flowering phenology of Yoshino cherry at its southern distribution limit.

To clarify the influence of climate change on the flowering phenology of Yoshino cherry at its southern distribution limit, we examined the relationship between cold exposure for endodormancy release (chilling requirement) and heat requirement for bud growth on Hachijojima Island, Japan, from 1948 to 2024. Cold exposure and heat requirement had a significant relationship approximated by linear or log-linear functions. In years with less cold exposure, the first flowering dates were much later than normal, in accordance with the higher heat requirement. Our results indicate that the variation in the balance between cold exposure and heat requirement depending on the pattern of annual air temperature change is likely to vary the first flowering date greatly at the distribution limit of Yoshino cherry.

Identification of plant soil water and soil aeration corequisites: A management tool

AbstractPlant‐available soil‐water and adequate soil aeration within the root zone are essential corequisites for successful plant growth. Characterization of these two requirements for plant growth is generally done by independent measurements of water and air phase properties and functions in soil, with limited emphasis on their combined effect. This study investigated soil‐water characteristic (SWC) measurements in vadose soil profiles (up to 117‐cm depth) in six pasture soils to examine the combined behavior of soil‐water and diffusion‐controlled aeration within the root zone. The soil moisture measurements were made over matric potentials ranging from −1 to −1500 kPa using tension table and pressure plate apparatus. The van Genuchten model was used to parameterize the measured SWC curve, while the Millington–Quick model was used to derive soil‐gas diffusivity from measured soil physical properties. Based on two simple indices, derived to represent plant‐available soil‐water and soil aeration status at a given moisture content, we propose an assessment matrix, which illustrates how a soil satisfies the corequisites for successful plant growth, as it drains to different matric potentials upon irrigation. Results show a pronounced effect of soil texture and, to a lesser extent, soil structure on satisfying these corequisites. With the aid of the assessment matrix, we observed that loam, sandy loam textures exhibited a good overall performance, while sand, clay loam, and clay soils struggled to meet these corequisites during drainage.

A convenient and versatile culturomics platform to expand the human gut culturome of Lachnospiraceae and Oscillospiraceae.

The human gut microbiota is increasingly being recognised to play an important role in maintaining health. The families Lachnospiraceae and Oscillospiraceae in particular, are often reduced in disease states but are relatively poorly represented in culture collections. Cultured representatives are required to investigate the physiology and host interactions of gut microbes. Establishing cultured isolate collections can be laborious and expensive owing to the fastidious growth requirements of these organisms and the costs associated with taxonomic classification. This study proposes a culturomics platform combining a single basal culture medium with matrix-assisted laser adsorption/ionisation coupled to time-of-flight mass spectrometry (MALDI-TOF MS) for fast and reliable isolation and identification of hundreds of novel isolates. In this study, basal YCFA medium supplemented with either glucose, apple pectin, or porcine mucin was used to cultivate a total of 724 different isolates derived from only 11 different faecal samples from healthy volunteers, of which 389 isolates belonged to the Lachnospiraceae and Oscillospiraceae families. Moreover, 27 isolates could not be assigned to known species based on their 16S rRNA gene, 17 of which may even represent novel genera. To aid MALDI-TOF MS identification of gut bacteria, the commercial database was complemented with the MaldiGut database presented here, containing a collection of 132 different Main Spectrum Profiles, including the profiles of 125 Firmicutes species, 3 Bacteroidetes species, 3 Actinobacteria species, and one Verrucomicrobia species. The culturomics platform and MaldiGut database presented here will enable further expansion of the gut culturome, especially within the understudied Lachnospiraceae and Oscillospiraceae families.

CFD Analysis to Optimize Air Quality in Aeroponic Tower Garden

Aeroponic tower gardens represent an innovative approach to urban agriculture, utilizing vertical structures to cultivate plants without soil. Research highlights the efficiency of this method in optimizing resource usage, such as water and space, compared to traditional farming. Studies emphasize increased crop yields, faster growth rates, and reduced environmental impact. Additionally, aeroponic systems enable precise nutrient delivery to plants, fostering optimal growth conditions. While the technology shows promise, further investigations are needed to address potential challenges and optimize its application in diverse agricultural settings. The study presents the simulation of air temperature and humidity distribution in a closed chamber of the vertical farm for optimization purposes. The environmental conditions inside the chamber are optimized for plant growth, to maintain the temperature at a range of 18-24 °C temperature and the relative humidity at a range of 75-85 %. The paper also discusses the challenges, limitations, and future recommendations for improving the system. Simulation of the system, on the other hand, is crucial not only for prototype fabrication but also for the optimization of sensor locations. The simulation of the tower garden system was performed using ANSYS-FLUENT to portray how the airflow inside the tower garden's enclosed environment was distributed. The system parameters such as humidity and temperature were set to meet the plants' growth requirements, and the system was treated as the steady state with an adiabatic boundary. Based on the simulation results, the best design recommended is to use two humidity and temperature sensors, one at the top and the other at the core of the prototype. Hence, a complete mapping of temperature and humidity distribution that is critical for plant growth would be occurred.