Optimized Ground State Geometries Research Articles

Colourful 3-amino-1,8-naphthalimide alkyl-substituted fluorescent derivatives

The optical properties of four 3-amino-1,8-naphthalimide derivatives differing in the degree of substitution at the amino functionality were synthesised and studied by UV–visible absorbance and fluorescence spectroscopy in 1:1 (v/v) methanol/water and methanol. The compounds were structurally characterized by NMR, IR and HRMS. The charge transfer absorbance band was observed to shift to longer wavelength with increasing ethyl substitution. The emission band was also observed to shift to longer wavelengths with a decrease in the emission intensity with increasing ethyl substitution due to the peri effect. Irradiation of dye methanol solutions and in the solid state with a 365 nm UV lamp reveals distinct emission colours for each compound. Significantly larger Stokes shifts are observed in methanol than in mixed aqueous methanol. Quantum chemical calculations at the B3LYP/TZVP level of theory provided insight into the optimized ground state geometry, frontier molecular orbitals levels and solute-solvent dynamics revealing a stronger hydrogen bond between the 3-amino-1,8-naphthalimides and methanol in the lowest S1 excited state. The dyes were tested as fluorescent stains in MCF-7 cancer cells and observed to emit green emission in various organelles.

Quantum Chemistry Dataset with Ground- and Excited-state Properties of 450 Kilo Molecules

Due to rapid advancements in deep learning techniques, the demand for large-volume high-quality datasets grows significantly in chemical research. We developed a quantum-chemistry database that includes 443,106 small organic molecules with sizes up to 10 heavy atoms including C, N, O, and F. Ground-state geometry optimizations and frequency calculations of all compounds were performed at the B3LYP/6-31G* level with the BJD3 dispersion correction, while the excited-state single-point calculations were conducted at the ωB97X-D/6-31G* level. Totally twenty-seven molecular properties, such as geometric, thermodynamic, electronic and energetic properties, were gathered from these calculations. Meanwhile, we also established a comprehensive protocol for the construction of a high-volume quantum-chemistry dataset. Our QCDGE (Quantum Chemistry Dataset with Ground- and Excited-State Properties) dataset contains a substantial volume of data, exhibits high chemical diversity, and most importantly includes excited-state information. This dataset, along with its construction protocol, is expected to have a significant impact on the broad applications of machine learning studies across different fields of chemistry, especially in the area of excited-state research.

A differentiable quantum phase estimation algorithm

Abstract The simulation of electronic properties is a pivotal issue in modern electronic structure theory, driving significant efforts over the past decades to develop protocols for computing energy derivatives. In this work, we address this problem by developing a strategy to integrate the quantum phase estimation algorithm within a fully differentiable framework. This is accomplished by devising a smooth estimator able to tackle arbitrary initial states. We provide analytical expressions to characterize the statistics and algorithmic cost of this estimator. Furthermore, we provide numerical evidence that the estimation accuracy is retained when an arbitrary state is considered and that it exceeds the one of standard majority rule. 
We explicitly use this procedure to estimate chemically relevant quantities, demonstrating our approach through ground-state and triplet excited state geometry optimization with simulations involving up to 19 qubits. This work paves the way for new quantum algorithms that combine interference methods and quantum differentiable programming.

An automated protocol to construct flexibility parameters for classical forcefields: applications to metal-organic frameworks.

In this work, forcefield flexibility parameters were constructed and validated for more than 100 metal-organic frameworks (MOFs). We used atom typing to identify bond types, angle types, and dihedral types associated with bond stretches, angle bends, dihedral torsions, and other flexibility interactions. Our work used Manz's angle-bending and dihedral-torsion model potentials. For a crystal structure containing N atoms in its unit cell, the number of independent flexibility interactions is 3(N atoms - 1). Because the number of bonds, angles, and dihedrals is normally much larger than 3(N atoms - 1), these internal coordinates are redundant. To reduce (but not eliminate) this redundancy, our protocol prunes dihedral types in a way that preserves symmetry equivalency. Next, each dihedral type is classified as non-rotatable, hindered, rotatable, or linear. We introduce a smart selection method that identifies which particular torsion modes are important for each rotatable dihedral type. Then, we computed the force constants for all flexibility interactions together via LASSO regression (i.e., regularized linear least-squares fitting) of the training dataset. LASSO automatically identifies and removes unimportant forcefield interactions. For each MOF, the reference dataset was quantum-mechanically-computed in VASP via DFT with dispersion and included: (i) finite-displacement calculations along every independent atom translation mode, (ii) geometries randomly sampled via ab initio molecular dynamics (AIMD), (iii) the optimized ground-state geometry using experimental lattice parameters, and (iv) rigid torsion scans for each rotatable dihedral type. After training, the flexibility model was validated across geometries that were not part of the training dataset. For each MOF, we computed the goodness of fit (R-squared value) and the root-mean-squared error (RMSE) separately for the training and validation datasets. We compared flexibility models with and without bond-bond cross terms. Even without cross terms, the model yielded R-squared values of 0.910 (avg across all MOFs) ± 0.018 (st. dev.) for atom-in-material forces in the validation datasets. Our SAVESTEPS protocol should find widespread applications to parameterize flexible forcefields for material datasets. We performed molecular dynamics simulations using these flexibility parameters to compute heat capacities and thermal expansion coefficients for two MOFs.

Palladium(II) Complexes of 4-Phenyl-3-thiosemicarbazone Ligands: Insights Into Cytotoxic Properties and Mode of Cell Death.

Reactions between sodium tetrachloropalladate and 2- (or 4-) substituted 4-phenyl-3-thiosemicarbazone ligands (HLR), with various electron-donating and electron-withdrawing substituents (R = OCH3, NO2, and Cl), afford square-planar complexes of the general formula [Pd(LR)2]. Ground-state geometry optimization and the vibrational analysis of cis- and trans-isomers of the complexes were carried out to get an insight into the stereochemistry of the complexes. Natural bond orbital analysis was used to analyze how the nature of the substituent affects the natural charge of the metal center, the type of hybridization, and the strength of the M-N and M-S bonds. Using spectrophotometry, the stability of the complexes, and their DNA binding abilities were assessed. The Pd(II) complexes showed moderate cytotoxicity against MCF-7 and Caco-2 cell lines, two of the assessed malignant cell lines, resulting in all known cell death types, including early apoptotic bodies and late apoptotic vacuoles as well as evident necrotic bodies.

Single crystal of barium bis para-nitrophenolate para-nitrophenol tetrahydrate for NLO applications: crystal growth and DFT analysis

Abstract Single crystals of barium bis para-Nitrophenolate para-Nitrophenol tetrahydrate (BBPNT) were grown via the slow evaporation technique. The crystal dimensions were measured to be 15 mm × 10 mm × 6 mm. The BBPNT crystal was analyzed using X-ray diffraction, FTIR spectrum, UV–vis spectrum, dielectric studies, thermo-gravimetric (TG) differential thermal analyses (DTA), Vickers microhardness test, second-harmonic generation efficiency, Z-scan technique, PL spectra, and laser damage threshold studies. These findings were previously published in our paper. In the current situation, the theoretical methods include analyzing several aspects, such as the molecular structure determined using X-ray experimentation at its lowest energy state. This analysis is then contrasted by means of density functional theory (DFT) with a suitable set of basic functions. The first-order hyperpolarizability may also be determined via the use of Density Functional Theory (DFT) methods. The molecule’s stability, resulting from hyper conjugative interactions, was examined using the natural bond orbital approach to analyses its nonlinear optical activity and charge delocalization. The magnitude of the HOMO–LUMO energy gap indicates the potential for charge transfer inside the molecule. The investigation of donor-acceptor interactions was conducted using NBO analysis based on optimized ground state geometries.

Stannane in extreme ultraviolet lithography and vacuum technology: Synthesis and characterization

In extreme ultraviolet (EUV) lithography, tin droplets evaporate and subsequently coat various surfaces including the collector mirrors. To clean off the tin, a hydrogen plasma is often used, but as a result, an unstable by-product, stannane (SnH4) is formed. The physicochemical characteristics of this gas, its formation in a plasma process, and its interaction with various materials have not been explored and understood completely. Here, the electron ionization mass spectrum of SnH4 is presented. All ten natural abundance isotopes were observed experimentally for each fragment, i.e., Sn+, SnH+, SnH2+, and SnH3+. Density functional electronic structure theory was used to calculate the optimized ground state geometries of these gas phase species and their relative stabilities and helped explain the absence of SnH4+ in the observed signals. The density of the liquid, its cracking pattern, and the surface morphology of its deposits were examined. The surface of the deposited tin film resulting from the decomposition and subsequent oxidation was characterized by x-ray photoelectron spectroscopy. The main species found at the surface were metallic tin and tin (II) oxide (SnO). The detailed characterization of stannane should help correctly identify it in EUV lithographic processes and develop approaches in the future to mitigate its decomposition and redeposition on the collector mirrors or vacuum chamber walls.

Electron transfer and intersystem crossing in the coumarin-anthracene electron donor-acceptor dyads

A series of compact coumarin (Cou)-anthracene (An) electron donor-acceptor dyads were prepared, in which the two units are directly connected at either 2- or 9- position of the An unit and the 3-position of the Cou unit to study the relationship between the molecular configuration, electronic coupling and the intersystem crossing (ISC) efficiency. Single crystal X-ray diffraction results indicate that the dihedral angles are 88.0° and 85.7°, respectively, in the dyads, in which the donor and acceptor are connected by 9- position of the An unit (Cou-9An and Cou-9AnCN). However, for Cou-2An the optimized ground state geometry indicates a more coplanar configuration with a dihedral angle of 38.6°. The solvent polarity-dependent singlet oxygen quantum yields (ΦΔ) of the orthogonal dyads (Cou-9An and Cou-9AnCN) are 39% (in acetonitrile) and 64% (in dichloromethane), respectively. whereas ΦΔ is negligible for the coplanar dyad (Cou-2An). These results indicated that orthogonal geometry is beneficial to spin−orbit charge transfer ISC (SOCT-ISC) mechanism. Nanosecond transient absorption spectra demonstrated that the lowest triplet state was mainly localized on An unit in Cou-9An and Cou-9AnCN, with the intrinsic triplet state lifetime of 234 and 207 μs, respectively. Triplet state delocalization was observed for Cou-2An, which prolongs the triplet state lifetime to 742 μs. Femtosecond transient absorption spectra results indicated fast charge separation (CS, 0.36−0.41 ps) and slow charge recombination (CR, 2.1−2.8 ns) in the orthogonal dyads. Time-resolved electron paramagnetic resonance (TREPR) spectra further confirmed the SOCT-ISC mechanism in the orthogonal dyads (Cou-9An and Cou-9AnCN), however, the SOCT-ISC and spin orbit ISC (SO-ISC) mechanism are both responsible for the triplet state formation in the coplanar dyad (Cou-2An). Electron spin polarization (ESP) pattern of the triplet state TREPR spectra of Cou-9An and Cou-9AnCN is (a,e,a,e,a,e), however, ESP phase pattern of (e,a,e,a,e,a) and (e,e,e,a,a,a) were observed for the two triplet states required for the simulation of the TREPR spectrum of Cou-2An, which indicated that ESP patterns of triplet state not only depend on the molecular geometry, but also on the structure of the electron donor and acceptor.

Novel triphenylamine-based porphyrins: Synthesis, structural characterization, and theoretical investigation for dye-sensitized solar cell applications

In this work, we have synthesized a series of novel porphyrin derivatives, 8, 12, and 16 in high yields. The new porphyrin derivatives are equipped with different aromatic substituents at the peripheral position. The structures of the new compounds were confirmed by elemental and spectral analyses. Among these porphyrin structures, porphyrins 8, 12, and 16 were molecularly designed and synthesized based on triphenylamine (TPA), as the core donor (DTPA), linked to one, two, or three porphyrin (DPorph) moieties with different numbers of anchoring groups (AG) to generate: DTPA-π-DPorph-A(DE1), DTPA(π-DPorph-A)2(DE2) and DTPA(π-DPorph-A)3(DE3). The structural, electronic, and spectroscopic properties of the dyes have been obtained by using the density functional theory (DFT) and time-dependent-DFT calculations. Based on the DFT studies, porphyrins 8, 12, and 16 possess all thermodynamics requirements to be used for DSSCs as the HOMO values for these three porphyrins are greater than the electrolyte's redox potential (I−/I3−, -5.2 eV), while the LUMO level more negative than the conduction band of TiO2 (- 4.2 eV), which indicate that these structures are suitable as sensitizers in DSSCs. All proposed structures were estimated in the gaseous state based on their optimized ground state geometry to estimate their EHOMO, ELUMO, and HOMO-LUMO energy gaps. porphyrins 8, 12, and 16 electronic excitations were also probed using TD-DFT experiments, which were performed under the impact of time-dependent disturbances. The simulated absorption spectra of these structures revealed the porphyrins' typical Soret- and Q-bands. porphyrin 16 with tri-cyanoacrylic acid anchoring groups has a wider absorption spectrum than other porphyrins (8, 12), and their Soret- and Q-bands are red-shifted. As a final step, we analyzed and described the DSSC's performance using the concept of DFT reactivity indices. A more efficient DSSC can be built using this approach to correlate cell efficiency with molecular properties.

Studying the Formation of Choline Chloride- and Glucose-Based Natural Deep Eutectic Solvent at the Molecular Level.

The liquid waste is the major source of waste, which usually generated from academic laboratories and industry during the extraction, separation, chemical synthesis, and pretreatment processes. These chemical and engineering processes require more solvents. In this regard, there is a need to develop more environmentally friendly, cheaper, non-toxic solvents that are harmless to humans and the environment. In this regard, deep eutectic solvents (DES) and their derivatives so-called natural deep eutectic solvents (NADES) are a new field in the search for green alternative solvents. In our work, the formation of choline chloride-based NADESs using density functional theory (DFT) calculations, and classical all-atom molecular dynamics (MD) simulation was studied in detail using Gaussian09 and Gromacs software's. Next, the ground state geometry optimizations were performed in the gas phase using DFT B3LYP 6-31 + G(d) level of theory. Moreover, classical all-atom MD simulations were implemented using Gromos force field. After the modeling and simulations, the DFT calculation results revealed the formation of NADESs via formation (creation) of binding between chlorine and choline, and chlorine and glucose. At the same time, the results of classical all-atom MD simulations, based on the time average of the equilibrated production run of MD simulations, stated that the nitrogen atom of choline ion and chloride ion has greater interactions, while chloride ion has also greater interaction with glucose during formation of NADES. The outcomes of both DFT and classical all-atom MD simulations are in good agreements.

Synthesis and Thermal, Photophysical, Electrochemical Properties of 3,3-di[3-Arylcarbazol-9-ylmethyl]oxetane Derivatives.

Novel oxetane-functionalized derivatives were synthesized to find the impact of carbazole substituents, such as 1-naphtyl, 9-ethylcarbazole and 4-(diphenylamino)phenyl, on their thermal, photophysical and electrochemical properties. Additionally, to obtain the optimized ground-state geometry and distribution of the frontier molecular orbital energy levels, density functional theory (DFT) calculations were used. Thermal investigations showed that the obtained compounds are highly thermally stable up to 360 °C, as molecular glasses with glass transition temperatures in the range of 142–165 °C. UV–Vis and photoluminescence studies were performed in solvents of differing in polarity, in the solid state as a thin film on glass substrate, and in powders, and were supported by DFT calculations. They emitted radiation both in solution and in film with photoluminescence quantum yield from 4% to 87%. Cyclic voltammetry measurements revealed that the materials undergo an oxidation process. Next, the synthesized molecules were tested as hole transporting materials (HTM) in perovskite solar cells with the structure FTO/b-TiO2/m-TiO2/perovskite/HTM/Au, and photovoltaic parameters were compared with the reference device without the oxetane derivatives.

A relation between the structural diversity and photoluminescent properties in three new classes of Eu3+ hydrocinnamate complexes containing N,N-bidentate and N,N,N-tridentate ancillary ligands

In this work, we present the synthesis, solid state characterization and complete photoluminescence study of three new photoluminescent Eu3+ hydrocinnamate complexes containing the N,N- bidentate and N,N,N-tridentate ancillary ligands 2, 2’: 6′,2″-terpyridine (terpy), 4,4′-dimethyl-2,2′- bipyridine (4,4′-dmbpy) and bathophenanthroline (bath). The spectroscopic and analytical techniques indicate the formation of compounds with the formulas [Eu (cin)3(H2O) (terpy)]. H2O (1), [Eu2 (cin)6 (4,4′-dmbpy)2] (2) and [Eu2 (cin)6 (bath)2] (3), with the monometallic and homobimetallic nature related to the type of ancillary ligand, as evidenced by powder X-ray diffaction data. Through the RM1 model, the optimized ground state geometries of the complexes were obtained, and posteriorly used in the energy transfer elucidation process. The photoluminescent properties show an intimate relationship with the molecular structures, where the 5D0 → 7F0 transition energy and Ω2 Judd-Ofelt parameter value are reflected in the coordination numbers and modes of the carboxylate groups. The intense red emission and structure/photoluminescence interrelationship can opens the possibility to development of new spectroscopic probes based on the Eu3+ coordination compounds.

Terpyridine Zn(II) azide compounds: Spectroscopic and DFT calculations

Square-pyramidal Zn(II) azide complexes with the formula of [Znn(N3)2nL] (n = 1; L = 4′-(2-pyridyl)-2,2′:6′,2′'-terpyridine (LPy), 4′-(4-phenylmorpholine)-2,2′:6′,2′'-terpyridine (LMorph), and n = 2; L = 1,4-bis(2,2′:6′,2′'-terpyridin-4′-yl)benzene (LBPY)) were synthesized, and structurally characterized using different spectroscopic and analytical tools. Ground-state geometry optimization and harmonic vibrational analysis were carried out at two different levels of theory (B3LYP/LANL2DZ and CAM-B3LYP/def2-SVP) to gather insights into the local minimum structures. Natural bond orbital (NBO) analyses revealed that the electronic population of the 3d orbitals of Zn(II) ion is corresponding to the oxidation state of Zn(I), not Zn(II), in agreement with the ligand to metal charge transfer. Molecular electrostatic potential energy maps showed that the azido ligand may act as a nucleophile in the cycloaddition coupling with electron poor dipolar molecules. The electronic structure and transitions were investigated by executing time dependent density functional theory (TDDFT) calculations.

Effect of the complex-formation ability of thiosemicarbazones containing (aza)benzene or 3-nitro-1,8-naphthalimide unit towards Cu(II) and Fe(III) ions on their anticancer activity

We recently described a novel class of thiosemicarbazones (TSCs) with a high anticancer activity. Now, we expanded this compound library with a new class of TSCs with a 3-nitro-1,8-naphthalene unit. Thus, a series of novel TSC conjugates was obtained to determine the effect of its chemical structure on spectroscopic properties, metal complexing and biological activity. They were prepared in a microwave reactor, provided compounds with both a high yield and purity. Nuclear magnetic resonance (1H and 13C NMR, COSY, HMQC) and infrared spectroscopy were used to characterize them structurally. Additionally, DFT calculations were performed in order to obtain the optimized ground-state geometry. Physicochemical spectroscopic studies were conducted in different solvents and conditions to assess the effect of the substituent on the optical properties and metal complexing ability. The anticancer activity was tested on three cancer cell lines and then correlated with the spectroscopic results. Here, we show based on in vitro chelating studies, that anticancer activity is closely correlated with the Fe3+ and Cu2+ chelating ability of these compounds.

Electronic and thermal transport in novel carbon-based bilayer with tetragonal rings: a combined study using first-principles and machine learning approach.

In this article, the structural, electronic and thermal transport characteristics of bilayer tetragonal graphene (TG) are systematically explored with a combination of first-principles calculations and machine-learning interatomic potential approaches. Optimized ground state geometry of the bilayer TG structure is predicted and examined by employing various stability criteria. Electronic bandstructure analysis confirmed that bilayer TG exhibits a metallic band structure similar to the monolayer T-graphene structure. Thermal transport characteristics of the bilayer TG structure are explored by analysing thermal conductivity, the Seebeck coefficient, and electrical conductivity. The electronic part of the thermal conductivity shows linearly increasing behaviour with temperature, however the lattice part exhibits the opposite character. The lattice thermal conductivity part is investigated in terms of the three phonon scattering rates and weighted phase space. On the other hand, the Seebeck coefficient goes through a transition from negative to positive values with increasing temperature. The Wiedemann-Franz law regarding electrical transport of the bilayer TG is verified and confirms the universal Lorentz number. Specific heat of the bilayer TG structure follows the Debye model at low temperature and constant behaviour at high temperature. Moreover, the Debye temperature of the bilayer TG structure is verified by ab initio calculations as well as fitting the specific heat data using the Debye model.

Hydrolysis of Schiff bases with phenyl-ethynyl-phenyl system: The importance for biological and physicochemical studies

A series of new Schiff bases containing the phenyl-ethynyl-phenyl system was synthesized and their thermal stability, photophysical and electrochemical properties were investigated. Moreover, DFT calculations were performed to obtain the optimized ground-state geometry and distribution of the HOMO and LUMO levels as well as IR spectra of the prepared compounds. It was found that, the photoluminescence of synthesized imines was negligible in all investigated organic solvents except for the PBS/ACN mixture. As was proved in further studies, this phenomenon was related to the partial hydrolysis of imines, which is the source of the fluorogenic aldehyde causing the aggreggacion incrased-emision effect. In further research, due to the susceptibility of the azomethines to partial hydrolysis, the biological activity of 2-{(E)-[4-(phenylethynyl) phenyl]imino}phenol (1b), substrate (2-aminophenol) and Cu(II)-1b complex was analyzed. The biological tests showed, that 1b (as example of imine resveratrol analogue), demonstrated its increased cytostatic activity in prostate cancer cellular system. It was proved that the non-hydrolyzed imine was crucial for the cytotoxic effect. This activity could be ascribed to its Cu(II) complexing capability as showed in our previous research.

Theoretical Study of the Effect of π-Bridge on Optical and Electronic Properties of Carbazole-Based Sensitizers for DSSCs.

Eight novel metal-free organic sensitizers were proposed for dye-sensitized solar cells (DSSCs), theoretically calculated and studied via density functional theory with D-π-A structure. These proposals were formed to study the effect of novel π-bridges, using carbazole as the donor group and cyanoacrylic acid as the anchorage group. Through the M06/6-31G(d) level of theory, ground state geometry optimization, vibrational frequencies, the highest occupied molecular orbital, the lowest unoccupied molecular orbital, and their energy levels were calculated. Further, chemical reactivity parameters were obtained and analyzed, such as chemical hardness (η), electrophilicity index (ω), electroaccepting power (ω+) and electrodonating power (ω-). Free energy of electron injection (ΔGinj) and light-harvesting efficiency (LHE) also were calculated and discussed. On the other hand, absorption wavelengths, oscillator strengths, and electron transitions were calculated through time-dependent density functional theory with the M06-2X/6-31G(d) level of theory. In conclusion, the inclusion of thiophene groups and the Si heteroatom in the π-bridge improved charge transfer, chemical stability, and other optoelectronic properties of carbazole-based dyes.

Probing cooperativity in C-H⋯N and C-H⋯π interactions: Dissociation energies of aniline⋯(CH4)n (n = 1, 2) van der Waals complexes from resonant ionization and velocity mapped ion imaging measurements.

Recent studies of the weakly bound anisole⋯CH4 complex found a dual mode of binding, featuring both C/H⋯π and C/H⋯O noncovalent interactions. In this work, we examine the dissociation energies of related aniline⋯(CH4)n (n = 1, 2) van der Waals clusters, where both C/H⋯π and C/H⋯N interactions are possible. Using a combination of theory and experiments that include mass-selected two-color resonant two-photon ionization spectroscopy, two-color appearance potential (2CAP) measurements, and velocity-mapped ion imaging (VMI), we derive the dissociation energies of both complexes in the ground (S0), excited (S1), and cation radical (D0) states. As the amide group is non-planar in the ground state, the optimized ground state geometry of the aniline⋯CH4 1:1 complex shows two isomers, each with the methane positioned above the aniline ring. The observed redshift of the electronic origin from the aniline monomer is consistent with TDDFT calculations for the more stable isomer, where the methane sits on the same face as the amino hydrogens. The dissociation energies of the 1:1 complex, obtained from 2CAP measurements, are in good agreement with the calculated theoretical values from selected density functional theory methods. VMI data for the 1:1 complex gave a binding energy value overestimated by ∼179 cm-1 when compared to the 2CAP results, indicating that dissociative ionization selectively populates an excited vibrational level of the aniline cation radical. Given that the electron donating ability of aromatic substituents trends as -NH2 > -OCH3 > -CH3, it is noteworthy that the strength of methane binding also trends in this order, as found by experiment (dissociation energies in kJ/mol: 6.6 > 5.8 > 4.5) and predicted by theory (PBE0-D3/def2-QZVPPD, in kJ/mol: 6.9 > 6.0 > 5.0). For the 1:2 complex of aniline and methane, calculations predict that the more stable conformer is the one where the two methane molecules lie on opposite faces of the ring, consistent with the observed redshift of the electronic origin. Unlike the anisole-methane 1:2 complex, which shows an enhanced dissociation energy for the loss of one methane in comparison with the 1:1 complex, here, we find that the energy required to remove one methane from the ground state aniline-methane 1:2 complex is smaller than that of the 1:1 complex, consistent with theoretical expectations.

DFT Study of Leuco-Indigo and Indigo as Active Material in Dye-Sensitized Solar Cell

Computational study of natural indigo has been carried out to get the optimized structure and electronic properties of two indigo at different pH. It has been found that indigo has the potential to be applied as active material in the dye-sensitized solar cell. Computational calculations are performed using Density Functional Theory (DFT) with B3LYP functional and 6-31G(d,p) for ground state geometry optimization and Time Dependent-Density Functional Theory (TD-DFT) for excited states single point calculation. All calculations are carried out in the gas phase. Geometry optimization results show that Indigo has a planar structure, whereas leuco-indigo structure is not planar. Leuco-indigo absorption wavelength is shorter than indigo. The density of HOMO and LUMO is spreading throughout the molecule. The density of electrons at LUMO extends to the anchoring group. Based on excitation energy, absorption wavelength, excitation composition, and HOMO-LUMO density, it can be concluded that indigo has the potential to be applied in dye-sensitized solar cell (DSSC)

New Tailored RNA-Targeted Organometallic Drug Candidates against Huh7 (Liver) and Du145 (Prostate) Cancer Cell Lines.

New organometallic drug candidates [Ph2Sn(HL)], 1, and [Ru(η6--p-cymene)(HL)Cl], 2, were designed and synthesized by in situ reaction of a Schiff base ligand (HL) and diphenyltin dichloride and [RuCl2(p-cymene)]2, respectively. The drug candidates 1 and 2 have been characterized by spectroscopic methods (Fourier-transform infrared spectroscopy, UV–vis, and 1H/13C NMR), elemental analysis, and single X-ray crystallographic studies (in case of 1). The ground-state geometry optimization of 1 and 2 was performed by density functional theory calculations. The interaction of 1 and 2 with tRNA was assessed by absorption spectroscopy, cyclic voltammetry, circular dichroism, and ethidium bromide displacement assay using fluorescence emission spectroscopy to determine their potential to act as antitumor agents. The cytotoxicity of 1 and 2 was screened against human liver carcinoma (Huh7), prostate cancer (Du145), and the normal prostate cell line (PNT 2). The results implicated a dose-dependent growth inhibition of the two cancer cells at concentrations (2.5–15 μM) of 1 and 2 with the treatment after 48 h. Interestingly, 1 revealed good selective activity toward the liver cancer cell line (Huh7). Furthermore, both the drug candidates 1 and 2 were found to be nontoxic toward the PNT 2 normal cell line. These studies lay a paradigm for rational efficacious drug design for chemotherapeutic intervention in cancers using new tailored organometallic drug entities; organotin(IV) and organoruthenium(II) have been demonstrated to be viable for the safe administration and specific targeted drug uptake by the resistant cancerous cell lines at low intracellular concentrations.