Good Meat Quality Research Articles

Genome survey of Siganus oramin: Identification and development of genome-wide microsatellite markers

The rabbitfish Siganus oramin has high economic value and is farmed widely in net cages and offshore ponds in China. S. oramin is popular due to its rapid growth and good meat quality. A genome survey of S. oramin was carried out using next-generation sequencing. About 71.79 Gb of high-quality sequence data were generated. The genome size was estimated to be 447.63 Mb with 17-mer frequency distribution. These clean reads were assembled into 2046,655 contigs, which were assembled further into 1167,113 scaffolds with a total length of 643.46 Mb. The guanine-cytosine (GC) content, heterozygosity, and sequence repeat ratio were calculated to be 43.43 %, 0.968 %, and 28.01 %, respectively. A total of 1692,323 simple sequence repeats (SSRs) were identified from the draft genome sequence. Among these SSRs, the dinucleotide repeat type was the most abundant and frequent (74.42 %, 2636.52 Mb), followed by the trinucleotide (17.83 %, 631.65 Mb) and tetranucleotide (5.44 %, 192.72 Mb). The most abundant motif was AC/GT (1085,431 and 2424.84 loci/Mb), followed by AG/CT (147,808, 330.20 loci/Mb). Among 55 SSR markers, 48 showed a clear and reproducible band checked by gel electrophoresis. The cross-species transferability of 29 out of 48 tested loci were successful in Siganus guttatus. Nine polymorphic SSR primers were used to evaluate the genetic diversity of a wild population of S. oramin from Shenzhen (China). This is the first report of genome-wide characterization within this taxon. These data could provide a useful foundation for the whole-genome sequencing of S. oramin and development of new molecular markers for the genes of Siganus species.

Population Structure and Selection Signatures in Chinese Indigenous Zhaotong Pigs Revealed by Whole-Genome Resequencing.

Zhaotong pig (ZTP) is a Chinese indigenous pig breed in Yunnan Province, known for its unique body shape and appearance, good meat quality, strong foraging ability, and adaptability. However, there is still a lack of research on its genome. In order to investigate the genetic diversity, population structure, and selection signatures of the breed, we conducted a comprehensive analysis by resequencing on 30 ZTPs and comparing them with genomic data from 10 Asian wild boars (AWBs). A total of 45,514,452 autosomal SNPs were detected in the 40 pigs, and 23,649,650 SNPs were retained for further analysis after filtering. The HE, HO, PN, MAF, π, and Fis values were calculated to evaluate the genetic diversity, and the results showed that ZTPs had higher genetic diversity and lower inbreeding coefficient compared with AWBs. Population structure was analyzed using NJ tree, PCA, ADMIXTURE, and LD methods. It was found that ZTPs were population independent of AWBs and had a lower LD decay compared to AWBs. Moreover, the results of the IBS genetic distance and G matrix showed that most of the individuals had large genetic distances and distant genetic relationships in ZTPs. Selection signatures were detected between ZTPs and AWBs by using two methods, FST and π ratio. Totals of 1104 selected regions and 275 candidate genes were identified. Finally, functional enrichment analysis identified some annotated genes that might affect fat deposition (NPY1R, NPY5R, and NMU), reproduction (COL3A1, COL5A2, GLRB, TAC3, and MAP3K12), growth (STAT6 and SQOR), tooth development (AMBN, ENAM, and ODAM), and immune response (MBL2, IL1A, and DNAJA3). Our results will provide a valuable basis for the future effective protection, breeding, and utilization of ZTPs.

Optimization of pulsed electric fields-assisted thawing process conditions and its effect on the quality of Zhijiang duck meat

Freezing storage is a common preservation method for industrialized duck meat. However, both the frozen storage and thawing processes of meat can affect meat quality. Therefore, appropriate thawing methods are crucial for maintaining good meat quality. In this study, a pulsed electric field (PEF) was used for thawing zhijiang duck meat and the freshed duck meats were used as control. Optimization of the PEF-assisted thawing process and its effect on the quality of zhijiang duck meat were analyzed. Our data showed that the shear force in the 2 kV/cm PEF-assisted thawing group was the lowest in PEF-assisted thawing groups. The color of zhijiang duck meat in the 2 kV/cm PEF-assisted thawing group was optimal. The 2 kV/cm PEF-assisted thawing could improve the texture characteristics of zhijiang duck meat and enhance water holding capacity of zhijiang duck meat. PEF-assisted thawing could better maintain the microstructure of zhijiang duck meat. Our data showed that if the intensity or duration of PEF treatment is too high, the quality of duck meat will actually decrease. Therefore, appropriate parameters should be selected in practical applications, which will provide a reference for the application of PEF-assisted thawing on the market.

Biochemical indicators, quality and safety of domestic and wild pig slaughter products

Animal husbandry is one of the important branches of agricultural production, which plays an important role in the formation of food security of Ukraine and providing the population with important types of food. The correct methodical approach to the inspection of organs and tissues of slaughtered animals allows to avoid errors in the diagnosis of various diseases, in the sanitary assessment of slaughter products, to prevent meat losses and the release of food products that are dangerous for humans. Analyzing the requirements of the modern market and the priority directions for the development of trade relations between the countries of the European Union for our country, it should be noted that the responsibility for the export and import of products of animal origin and the control of the production of high-quality and safe products is entrusted to the specialist of the state veterinary service. Organoleptic analysis of slaughter products is an important component of inspection. In addition, it should be noted that determining the degree of freshness of meat for a long time was carried out only with the help of the organoleptic method. It has been proven that organoleptic indicators provide comprehensive information for determining the good quality of meat. The quality of meat or its nutritional value refers to the chemical composition of the fleshy part, which includes muscle, fat and connective tissue. The chemical composition, energy value, digestibility, taste, culinary and other properties of meat depend on the ratio of these tissues. The quality of meat is influenced by the breed of animals, sex, age, fatness, the nature of fattening, conditions of transportation and pre-slaughter aging, methods of stunning, degree of exsanguination, etc. The article presents materials related to the inspection of animal slaughter products in the Zhytomyr region (agro-food market in the city of Olevsk). The study was carried out as part of the research work of the department of normal and pathological morphology, hygiene and expertise “Monitoring the content of toxic substances in drinking water, feed and their impact on the body of cattle and the quality and safety of products”, state registration number – 0120U101318. The purpose of the study is to inspect the slaughter products of domestic and wild pigs in the agro-food market of the Zhytomyr region. The task of the work was to determine the organoleptic, physico-chemical and microbiological indicators of slaughter products of domestic and wild pigs. The testing laboratory of veterinary and sanitary examination in the market carries out significant work on the inspection of animal slaughter products, which ensures the release of good-quality products for the population. As a result of the inspection of the slaughter products of domestic and wild pigs, it was established that all meat samples according to organoleptic parameters corresponded to the parameters of fresh high-quality meat, the reaction to peroxidase was positive, the pH of the meat ranged from 5.9 to 6.1. No trichinella was detected during trichinoscopy of pork samples. Veterinary and sanitary examination of livestock products on the markets is carried out only by veterinary medicine specialists of state laboratories or other state institutions of veterinary medicine. The laboratory carries out mandatory quality and safety control of all controlled products sold, including food products of animal origin intended for human consumption. In this regard, it is important to carry out inspection, sanitary evaluation of slaughter products of slaughter animals and determination of morphological characteristics of meat of domestic and wild pigs.

Meat quality of Santa Inês sheep fed forage palm (Opuntia ficus-indica, Mill) and water restriction

The aim of this study was to evaluate the physicochemical composition, fatty acids, and sensory properties of meat from Santa Inês sheep fed forage palm in the diet and with water restriction. They used 42 non-castrated male Santa Inês lambs, with about 180 days of age and an average weight of 21.6 ± 2.2 kg, distributed in a completely randomized design with seven treatments and six repetitions, and the data were submitted to regression analysis, factorial (level × water), and contrast between the control treatment and others. The treatments consisted of the inclusion of spineless cactus (0, 30, 50, and 70%). In treatments containing cactus pear (36 animals), half of the animals were placed under voluntary water consumption restriction. According to the physicochemical characteristics analyzed, lipids suffered an increasing linear effect (p<0.05) as they included spineless cactus in the diet of sheep. The control diet had the lowest percentage of lipids (2.44%). The inclusion of 50% cactus pear promoted a higher content of lipids (3.41), and restricting water intake resulted in higher lipid content (3.09). The inclusion of cactus pear and water restriction did not affect the profile of fatty acids in meat. In the studied sensory attributes (hardness, juiciness, flavor, color, aroma, and overall acceptability), only meat color suffered an increasing linear effect (p < 0.05). With the inclusion of spineless cactus in the diet, the meat from the lambs received good grades from the panelists, showing good acceptability. This demonstrates that the cactus pear provides sufficient water and nutrients for animals, resulting in the deposition of intramuscular fat, thus becoming a good-quality meat.

Integrated analysis of muscle transcriptome, miRNA, and proteome of Chinese indigenous breed Ningxiang pig in three developmental stages.

The Ningxiang pig, a distinguished local breed in China, is recognized for its good meat quality traits. This study examines the proteomics of Ningxiang pigs at three developmental stages and delves into the upstream transcriptomics of these proteomics. Such an analysis facilitates a deeper understanding of the molecular interplay between proteins and transcriptomes in the Ningxiang pig muscle, influencing muscle growth and development. In this research, we analyzed the muscles of Ningxiang pigs at three developmental stages: 30days in weaned piglets, 90days in nursery pigs, and 210days in late fattening pigs. There a total of 16 differentially co-expressed miRNAs (ssc-miRNA-1, ssc-miRNA-378, ssc-miRNA-143, ssc-miRNA-30e, etc.), 74 differentially co-expressed mRNA (PLIN3, CPT2, IGF2 and HSP90AB1, etc.) have been identified in the three stages. 572 differentially abundant proteins (DAPs) (APOC3, NDUFA2, HSPD1, ATP5E, PDHA1, etc.) were readily identified by comparing different time periods. According to the KEGG enrich pathway results that DAPs most enriched in growth and development pathways, immune mechanism pathways and maintaining functions of physical. Through short time-series expression miner (STEM) association analysis, a total of 571 negative miRNA-mRNA interaction pairs and 2 negative miRNA-mRNA-protein (Chr05_11955-Pig.17268.1-ATP5F1B, ssc-miR-194a-3p-Pig.15802.1-ACY1) interaction pairs were found. Our study provides a theoretical basis on molecular mechanism for the study of IMF deposition, muscle growth and immunity in Ningxiang pig breed.

The effect of rest duration on the physical and chemical quality of Brahman-Cross beef

Brahman Cross (BX) cattle are cattle produced by crossing Brahman cattle with European cattle. Brahman Cross is one of the beef cattle that has high productivity, resistance to high temperatures, resistance to relatively dry tropical environments, and good meat quality. This study was carried out to determine the effect of rest duration on the physical and chemical quality of Brahman Cross cattle on pH, water holding capacity, as well as fat and protein content of meat. The research was conducted at Mabar RPH Medan City. Meat physical and chemical tests were carried out at the Food Chemistry Analysis Laboratory, University of North Sumatera. Furthermore, this study used 48 Brahman Cross cattle and was designed with a statistical T-test consisting of 2 variables and 24 replications. The research treatment consisted of 24 Brahman Cross cattle without rest (0 hours), and 24 Brahman Cross cattle rested for 24 hours. The results showed that the duration of 0 hour rest and 24 hours rest before slaughter had no significant effect (P>0.05) on the pH and protein content, but had a significant effect (P>0.05) on water holding capacity and fat content.

The Effect of Sodium Nitrite Replacement with Lycopene Pigment in German Sausage and Evaluation of Its Physicochemical, Antimicrobial and Sensory Properties

Background: Meat products contain sodium nitrite. Consumer demand for natural preservatives instead of synthetic ones in foods has been growing in recent years because of their safety. Today, good quality meat products are produced worldwide, and in addition to desirable sensory properties, they are cheaper than fresh meat. Sausage with 40% red meat is one of these products which can partially meet the need for animal proteins. Methods: In this study, sodium nitrite was replaced by lycopene pigment at concentrations of 200, 400 and 600 ppm in 40% meat sausage. Physicochemical properties of sausage samples including moisture, protein, ash contents and pH value were measured according to National Standard. Microbial tests (Clostridium, mold, yeast and Clostridium perfringens count) were performed according to National Standards. The colorimetric lightness index (L*) of the sausage samples was measured. Sensory properties (smell and taste) were compared with control sample (40% meat sausage contain 120 ppm sodium nitrite) after 30 days of storage. Data were analyzed using Duncan's one-way analysis of variance at 95% confidence level through Minitab 16 software. Results: After 30 days of storage, no significant (P>0.05) difference was found in physicochemical properties, microbial tests, lightness index (L*), and sensory properties among the samples. Conclusions: Since no significant difference was observed in microbial load and sensory scores between sausage sample containing 600 ppm lycopene pigment and control sample, 600 ppm lycopene pigment can be used in sausage formulation.

Unraveling genomic diversity and positive selection signatures of Qaidam cattle through whole-genome re-sequencing.

Qaidam cattle are a typical Chinese native breed inhabiting northwest China. They bear the characteristics of high cold and roughage tolerance, low-oxygen adaptability and good meat quality. To analyze the genetic diversity of Qaidam cattle, 60 samples were sequenced using whole-genome resequencing technology, along with 192 published sets of whole-genome sequencing data of Indian indicine cattle, Chinese indicine cattle, North Chinese cattle breeds, East Asian taurine cattle, Eurasian taurine cattle and European taurine cattle as controls. It was found that Qaidam cattle have rich genetic diversity in Bos taurus, but the degree of inbreeding is also high, which needs further protection. The phylogenetic analysis, principal component analysis and ancestral component analysis showed that Qaidam cattle mainly originated from East Asian taurine cattle. Qaidam cattle had a closer genetic relationship with the North Chinese cattle breeds and the least differentiation from Mongolian cattle. Annotating the selection signals obtained by composite likelihood ratio, nucleotide diversity analysis, integrated haplotype score, genetic differentiation index, genetic diversity ratio and cross-population extended haplotype homozygosity methods, several genes associated with immunity, reproduction, meat, milk, growth and adaptation showed strong selection signals. In general, this study provides genetic evidence for understanding the germplasm characteristics of Qaidam cattle. At the same time, it lays a foundation for the scientific and reasonable protection and utilization of genetic resources of Chinese local cattle breeds, which has great theoretical and practical significance.

Population genetics reveals new introgression in the nucleus herd of min pigs.

Min pigs are a unique genetic resource among local pig breeds in China. They have more excellent characteristics in cold and stress resistance, good meat quality, and a high reproductive rate. However, the genetic structure and driving factors remain unclear in the nucleus herd. In this study, the genetic diversity of Min pigs was studied to reveal the formation mechanism of its unique genetic structure. We hope to protect and develop the genetic resources of Min pigs. We analyzed different types of genes to identify the genetic structure and gene introgression pattern of Min pigs. The nuclear DNA dataset includes information on 21 microsatellite loci and 6 Y-chromosome genes, and the mitochondrial D-loop gene is selected to represent maternal lineages. The above genes are all from the nucleus herd of Min pigs. The results of genetic structure identification and analysis of potential exogenous gene introgression patterns indicate that the nucleus herd of Min pigs maintains a high level of genetic diversity (polymorphism information content = 0.713, expected heterozygosity = 0.662, observed heterozygosity = 0.612). Compared with other Asian pig breeds, the formation of Min pig breeds is more special. Gene introgression from European pig breeds to Min pigs has occurred, which is characterized by complete introgression of paternal genes and incomplete introgression of maternal genes. Gene introgression caused by cross-breeding is not the main factor leading to the formation of the current genetic structure of Min pigs, but this process has increased the level of genetic diversity in the nucleus herd. Compared with the influence of gene introgression, our research suggest that artificial selection and environmental adaptive evolution make Min pigs form unique genetic characteristics.

Growth performance, meat quality, strength of jejunum and leg bones of both sexes Cherry Valley ducks fed with zeolite

Zeolite, as a natural mineral, could be a good additive for ducks, in line with pro-environmental trends. The study aimed to evaluate zeolite additives in feed for broiler ducks of both sexes on production results, meat quality, and the strength of the jejunum, tibia, and femur. The experiment used 200 Cherry Valley ducks, divided into a control group of males (CM) and females (CF) and an experimental group of males (ZM) and females (ZF). In the control groups, a commercial diet was used. In the experimental groups, 1% zeolite was added. The ZM group demonstrated higher body weight and weight gain than the CM group. Zeolite reduced the feed conversion ratio. A higher liver weight was found in the experimental group (ZM). Notably, zeolite influenced the weight of male pectoral muscles. Higher water loss in the pectoral muscles and higher protein content in the leg muscles were found in the same group. Females had a higher weight of neck and wings with skin. Female pectoral muscles had lower protein and water content. Zeolite in feed at a 1% level for broiler ducks could be recommended as a natural additive that positively affects the ducks' production results concerning good quality meat.

PRODUCTIVE CHARACTERISTICS OF PIGS OF DIFFERENT ORIGIN

Scientific and industrial research was carried out at the industrial pig farm. The efficiency of industrial crossbreeding of Large White pigs with Landrace and Pietrain meat breeds has been clarified. The reproductive capacity of sows after crossing with boars of different breeds, growth and development and fattening qualities of piglets of different genotypes were studied in a comparative aspect. Six experimental groups of pigs were formed for the experiment: Group I – purebred Large White breed, Group II – Landrace breed and Group III – Pietrain breed. Groups IV and V included crossbreeds IV – ½ Large White × ½ Landrace and V – ½ Large White × ½ Pietrain, respectively. Group VI is represented by three-breed hybrid animals: ¼ Large White × ¼ Landrace × ½ Pietrain. Such a scheme is due to obtaining crossbreds with high growth energy and good meat qualities. According to the indicators of growth and development, crossbred piglets had better dynamics during the entire growing period. At the end of fattening, the animals of Groups IV and VI exceeded their purebred contemporaries of the Large White breed in terms of reaching a body weight of 100 kg 10 and 8 days faster. The best slaughter yield had pigs of Group VI – ¼ Large White × ¼ Landrace × ½ Pietrain. A high indicator had also animals of Group IV – ½ Large White × ½ Landrace. In general, crossbred pigs obtained from different combinations of breeds ½ Large White × ½ Landrace and ¼ Large White × ¼ Landrace × ½ Pietrain exceeded their peers of purebred origin in terms of reproductive capacity and indicators of growth and development of piglets. During the research, it was also found that the half-carcass length was better in crossbreeds of the Landrace breed. Landraces also had a positive effect on the index of spigot thickness. The area of the “muscle eye” and the mass of the rear third of the half-carcass were significantly influenced by the Pietrain breed.

Veterinary and sanitary assessment of rabbit meat when using the Zdravur feed additive

Today, the production of rabbit meat products, which contains a large amount of protein, essential amino acids, vitamins, and minerals with a low fat content, is very promising in the meat industry. Thanks to these properties, the demand for rabbit meat, which is widely used in healthy diet, has increased. The purpose of this article was a veterinary and sanitary assessment of rabbit products when using the Zdravur feed additive in their nutrition. The farm-scale scientific experiment was carried out at a Californian rabbit farm where animals were divided into 2 groups of 10 rabbits each. The duration of the experiment was 31 days. The control group did not receive the Zdravur feed additive and ate food supplied on the farm. The experimental group, in addition to the basic diet, received the Zdravur feed additive at a dose of 2 g per 1 kg of granulated feed. After completing the experiment, 2 rabbits from each group were killed. The veterinary and sanitary examination of slaughter products included an organoleptic, chemical, and bacteriological assessment of slaughter products in accordance with the Rules for the Veterinary Inspection of Slaughtered Animals and the Veterinary and Sanitary Assessment of ¬Meat and Meat Products. In the experimental rabbits, a higher carcass weight was noted, which was 231 g (11.5%) greater than the control. Upon visual inspection of the experimental and control rabbit meat, an adequate bleeding of the carcasses was observed. All meat samples had a well-defined drying crust. After 24-hour storage, in control and experimental rabbit meat, the rate of leveling of pits on the surface after pinch test was the same. In the experimental animals, the content of protein, fat, and ash in meat was higher. Compared to the control, in the experimental group, the energy value was higher (by 8.4%). In rabbits, the use of the Zdravur feed additive does not cause pathological changes and improves the quality of slaughter products in terms of organoleptic, physico-chemical and bacteriological parameters, which meets the GOST requirements for good-quality meat.

Fujian Shengnong Development Dividend Distribution Study

Fujian Shengnong Development Dividend Distribution Research Fujian Shengnong Development Co., Ltd. is a leading enterprise in the national agricultural products industry and a leading enterprise in the agricultural products industry, and it is named Shengnong Development under the stock code 002299. Ltd. has formed a series of important characteristics such as high degree of product standardization, good quality of chicken meat, relatively stable delivery assurance ability, and strong responsiveness, etc. Shengong Development Co., Ltd. has developed into a strategic partner of Yum's chicken products, and it is an important source of suppliers to China's food and beverage companies. The effect of dividend distribution policy affects the operation of the whole company, which requires Shengnong Development Co. to make a scientific decision on dividend distribution. This case collects data on dividend distribution of Shengnong Development Co. during the six years of listing from 2016-2021, and analyzes the reasons for Shengnong Development Co.'s implementation of the dividend policy as well as the financial effects.

Whole Genome Resequencing Revealed the Genetic Relationship and Selected Regions among Baicheng-You, Beijing-You, and European-Origin Broilers.

As the only two You-chicken breeds in China, Baicheng-You (BCY) and Beijing-You (BJY) chickens are famous for their good meat quality. However, so far, the molecular basis of germplasm of the two You-chicken breeds is not yet clear. The genetic relationship among BCY, BJY, and European-origin broilers (BRs) was analyzed using whole genome resequencing data to contribute to this issue. A total of 18,852,372 single nucleotide polymorphisms (SNPs) were obtained in this study. After quality control, 8,207,242 SNPs were applied to subsequent analysis. The data indicated that BJY chickens possessed distant distance with BRs (genetic differentiation coefficient (FST) = 0.1681) and BCY (FST = 0.1231), respectively, while BCY and BRs had a closer relationship (FST = 0.0946). In addition, by using FST, cross-population extended haplotype homozygosity (XP-EHH), and cross-population composite likelihood ratio (XP-CLR) methods, we found 374 selected genes between BJY and BRs chickens and 279 selected genes between BCY and BJY chickens, respectively, which contained a number of important candidates or genetic variations associated with feather growth and fat deposition of BJY chickens and potential disease resistance of BCY chickens. Our study demonstrates a genome-wide view of genetic diversity and differentiation among BCY, BJY, and BRs. These results may provide useful information on a molecular basis related to the special characteristics of these broiler breeds, thus enabling us to better understand the formation mechanism of Chinese-You chickens.

Genetic parameters for carcass and meat quality traits in Jinhua, Duroc, and their crossbred pigs.

Jinhua pigs have excellent meat quality and intramuscular fat content (IMF). Crossbreeding of Jinhua with Duroc pigs with high productivity was conducted to develop a new composite breed that possesses the beneficial characteristics of both breeds. The objective of this study was to estimate the crossbreeding parameters (additive breed, dominance, and epistatic loss effects) using the Kinghorn model and genetic parameters (heritability and genetic correlation) for carcass and meat quality traits by analysing the phenotypic data of Jinhua, Duroc, and their crossbred pigs. Backfat thickness at the thinnest point above the 9th to 13th thoracic vertebrae (BF), longissimus muscle area between the 4th and 5th thoracic vertebrae (LMA), meat shear force value (SFV), and IMF were measured. The additive breed effects were significant for all traits: 1.59 cm, -8.30 cm2 , -6.38 lb/cm2 , and 1.76% for BF, LMA, SFV, and IMF, respectively. The dominance effect was significant for LMA (7.41 cm2 ) and IMF (-2.46%), whereas the epistatic loss effect was significant for only LMA (-15.18 cm2 ). The estimated heritability values were high, ranging from 0.58 for IMF to 0.76 for LMA. A negative but non-significant genetic correlation of -0.11 was estimated between BF and IMF; however, previous studies have reported that the genetic correlation between these traits is moderately positive in modern western pigs. Our results imply that, with the estimation of crossbreeding and genetic parameters, genetic improvement could be implemented to produce a new composite breed with good meat quality and productivity, to meet Japanese market requirements, by crossbreeding Jinhua and Duroc pigs.

Occurrence and Genotypic Identification of Blastocystis spp., Enterocytozoon bieneusi, and Giardia duodenalis in Leizhou Black Goats in Zhanjiang City, Guangdong Province, China.

Blastocystis spp., Enterocytozoon bieneusi, and Giardia duodenalis are three common zoonotic intestinal parasites that cause severe diarrhea and enteric diseases. Leizhou black goats are characterized by a high reproductive rate, fast growth, and good meat quality, making them one of the pre-eminent goat breeds in China. Goats are reportedly common reservoirs of these three intestinal pathogens, but no information on their prevalence or genotypic distributions in black goats in Guangdong Province, China, is available. A total of 226 fecal samples were collected from goats in Zhanjiang city and genomic DNA was extracted from them. The presence of the three pathogens was detected using nested PCR targeting the sequences encoding SSU rRNA (Blastocystis spp.), the internal transcribed spacer of rRNA (ITS; E. bieneusi), as well as beta-giardin, glutamate dehydrogenase, and triosephosphate isomerase (G. duodenalis). All PCR products were sequenced to determine the species and genotypes of the organisms. The total prevalence rates of Blastocystis spp., E. bieneusi, and G. duodenalis were 33.63% (76/226), 17.70% (40/226), and 24.78% (56/226), respectively. Four subtypes of Blastocystis spp. were detected: ST5 (n = 6), ST10 (n = 50), ST14 (n = 14), and ST21 (n = 6). Among them, ST10 was the dominant genotype, accounting for 65.79% of strains, followed by the genotypes ST14 (18.42%), zoonotic ST5 (7.89%), and ST21 (7.89%). Four genotypes of E. bieneusi were detected: CHG3 (n = 32), CM21 (n = 4), CHG1 (n = 2), and ET-L2 (n = 2). Among these, CHG3 was the dominant genotype. Assemblage E (n = 54) and concurrent assemblages A and E (n = 2) were identified in the G. duodenalis-positive goats using multilocus genotyping. Blastocystis spp., E. bieneusi, and G. duodenalis infections were common in Leizhou black goats, all of which have zoonotic genotypes, indicating the potential risk of zoonotic transmission. Our results provide basic data for the prevention and control of these three intestinal pathogens. Further studies are required to better understand their genetic characteristics and zoonotic potential in Guangdong Province.

Comparative Analysis of Structural Composition and Function of Intestinal Microbiota between Chinese Indigenous Laiwu Pigs and Commercial DLY Pigs.

Intestinal microbiota has an important impact on pig phenotypes. Previous studies mainly focused on the microbiota of feces and worldwide farmed commercial pigs, while research on the microbiota of various intestinal sections and indigenous pig breeds is very limited. This study aimed to characterize and compare the biogeography of intestinal microbiota in pigs of one Chinese indigenous breed and one commercial crossbred. In this study, we sequenced the microbiota of six intestinal segments in the grown-up pigs of a Chinese indigenous breed, Laiwu pigs, and the worldwide farmed crossbred Duroc × Landrace × Yorkshire (DLY) pigs by 16S rRNA sequencing, characterized the biogeography of intestinal microbiota, and compared the compositional and functional differences between the two breeds. The results showed that there were obvious differences in microbial structure and abundance between the small and large intestines. Laiwu pigs had higher large intestinal diversity than DLY pigs, while DLY pigs had higher small intestinal diversity than Laiwu pigs. Moreover, some specific bacterial taxa and Kyoto Encyclopedia of Genes and Genomes pathways were found to be related to the high fat deposition and good meat quality of Laiwu pigs and the high growth speed and lean meat rate of DLY pigs. This study provides an insight into the shifts in taxonomic composition, microbial diversity, and functional profile of intestinal microbiota in six intestinal segments of Laiwu and DLY pigs, which would be essential for exploring the potential influence of the host's genetic background on variation in microbiota composition and diversity.

Transcriptomic Profiling of Meat Quality Traits of Skeletal Muscles of the Chinese Indigenous Huai Pig and Duroc Pig.

The Huai pig is a well-known indigenous pig breed in China. The main advantages of Huai pigs over Western commercial pig breeds include a high intramuscular fat (IMF) content and good meat quality. There are significant differences in the meat quality traits of the same muscle part or different muscle parts of the same variety. To investigate the potential genetic mechanism underlying the meat quality differences in different pig breeds or muscle groups, longissimus dorsi (LD), psoas major (PM), and biceps femoris (BF) muscle tissues were collected from two pig breeds (Huai and Duroc). There were significant differences in meat quality traits and amino acid content. We assessed the muscle transcriptomic profiles using high-throughput RNA sequencing. The IMF content in the LD, PM, and BF muscles of Huai pigs was significantly higher than that in Duroc pigs (p < 0.05). Similarly, the content of flavor amino acids in the three muscle groups was significantly higher in Huai pigs than that in Duroc pigs (p < 0.05). We identified 175, 110, and 86 differentially expressed genes (DEGs) between the LD, PM, and BF muscles of the Huai and Duroc pigs, respectively. The DEGs of the different pig breeds and muscle regions were significantly enriched in the biological processes and signaling pathways related to muscle fiber type, IMF deposition, lipid metabolism, PPAR signaling, cAMP signaling, amino acid metabolism, and ECM-receptor interaction. Our findings might help improve pork yield by using the obtained DEGs for marker-assisted selection and providing a theoretical reference for evaluating and improving pork quality.

Effect of free range rearing on growth and meat quality of three different local chicken’s phenotypes

The present study was undertaken in order to evaluate the growth performances and meat quality of three indigenous chickens phenotypes reared under extensive conditions in the region of Chlef in Algeria. A week after hatching, 3 random groups of 35 chicks from each phenotype; normal plumage free-range chicken (NPFRC), crested free-range chicken (CFRC) and naked neck free-range chicken (NNFRC) were chosen and reared in free-range conditions for 18 weeks. The highest growth performance was shown by the crested free-range chicken (CFRC). In terms of meat quality, the analysis of variance (ANOVA) showed that crested phenotype (CFRC) showed the best nutritional qualities especially proteins and moisture. The discriminant analysis revealed that CFRC and NNFRC were better in terms of tenderness and overall acceptability. As consequence of these very interesting qualities, these local breeds should be considered for extensive production in order to provide a good quality meat, while assuring their preservation