Water deficit is the main limiting factor in rainfed agricultural production, negatively affecting germination and vegetative development. The objectives of this work were to characterize inbred lines for drought tolerance, to identify the most important root and shoot morphological traits for discriminating genotypes, to compare the efficiency of identifying contrasting inbred lines using uni- and multivariate methods, and to evaluate the effectiveness of identifying drought-tolerant genotypes at seedling and vegetative stages. We assessed 28 popcorn inbred lines and three maize single crosses, two drought-tolerant and one drought-sensitive. At the seedling stage, drought was induced on germitest paper moistened with polyethylene glycol 6000. At the vegetative stage, we applied water stress using lysimeters. We measured root and shoot morphological traits under water stress and no stress and processed the relative values. Uni- and multivariate methods, alone or in combination, were equally efficient for identifying contrasting inbred lines for drought tolerance. The confidence interval and Dunnett’s test worked very well when contrasting controls were included. Principal component analysis allowed to discriminate genotypes and identify the most important traits for discriminating them. At the seedling stage, inbred line 22-1824-2 was the most drought-tolerant and 22-1877-3 the most sensitive. At the vegetative stage, inbred lines 22-1920-1 and 22-1867-4 were the most tolerant and 22-1860-5 was the most sensitive. Root length, volume, dry weight, and surface area, as well as water content, were the most important traits for discriminating genotypes. Due to distinct tolerance mechanisms, drought tolerance should be assessed at both stages.
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