Genus Beta Research Articles

COVID-19 mutations: An overview.

The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) belongs to the genus Beta coronavirus and the family of Coronaviridae. It is a positive-sense, non-segmented single-strand RNA virus. Four common types of human coronaviruses circulate globally, particularly in the fall and winter seasons. They are responsible for 10%-30% of all mild upper respiratory tract infections in adults. These are 229E, NL63 of the Alfacoronaviridae family, OC43, and HKU1 of the Betacoronaviridae family. However, there are three highly pathogenic human coronaviruses: SARS-CoV-2, Middle East respiratory syndrome coronavirus, and the latest pandemic caused by the SARS-CoV-2 infection. All viruses, including SARS-CoV-2, have the inherent tendency to evolve. SARS-CoV-2 is still evolving in humans. Additionally, due to the development of herd immunity, prior infection, use of medication, vaccination, and antibodies, the viruses are facing immune pressure. During the replication process and due to immune pressure, the virus may undergo mutations. Several SARS-CoV-2 variants, including the variants of concern (VOCs), such as B.1.1.7 (Alpha), B.1.351 (Beta), B.1.617/B.1.617.2 (Delta), P.1 (Gamma), and B.1.1.529 (Omicron) have been reported from various parts of the world. These VOCs contain several important mutations; some of them are on the spike proteins. These mutations may lead to enhanced infectivity, transmissibility, and decreased neutralization efficacy by monoclonal antibodies, convalescent sera, or vaccines. Mutations may also lead to a failure of detection by molecular diagnostic tests, leading to a delayed diagnosis, increased community spread, and delayed treatment. We searched PubMed, EMBASE, Covariant, the Stanford variant Database, and the CINAHL from December 2019 to February 2023 using the following search terms: VOC, SARS-CoV-2, Omicron, mutations in SARS-CoV-2, etc. This review discusses the various mutations and their impact on infectivity, transmissibility, and neutralization efficacy.

Complications Following COVID-19 Infection or Vaccination in Libyan International Medical University Students and Their Families

Coronavirus disease 2019 (COVID-19) caused by a novel strain of coronavirus belonging to the genus Beta coronavirus named Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) emerged as a major pandemic worldwide. This contagious virus had spread in many different forms, and patients have demonstrated a wide range of symptoms, ranging from moderate to severe illness. This study aims to highlight the important associations between SARS-CoV-2 infection, vaccination, and possible complications at the Libyan International Medical University, Benghazi. This cross-sectional survey was conducted among students and their families at Libyan International Medical University in Benghazi, Libya. Among the 100 participants, 72% were between the ages of 18 and 39. Up to (59%) of participants were men. As for the infection with COVID-19, 77% of participants were infected. Most of the participants had no chronic diseases (69%); however, the most common chronic disease was diabetes mellitus (13%). 82% of participants were vaccinated; the most common types of vaccines administered were Sinopharm and Sputnik V (24%). Following vaccination, 71% of participants had no COVID-19 infection, while 29% did get the infection. Regarding this study, after COVID-19 infection, 66% of participants had no complications; however, 17% had pulmonary complications, which was the most common complication among the participants. As for the complications following the vaccination, 81% of participants had none, while there were pulmonary and neurological complications in 7–6%. The results of the study showed that the most frequent complications noticed among the participants following the COVID-19 infection and vaccination were pulmonary and neurological complications.

The cutaneous beta human papillomavirus type 8 E6 protein induces CCL2 through the CEBPα/miR-203/p63 pathway to support an inflammatory microenvironment in epidermodysplasia verruciformis skin lesions.

Human papillomavirus type 8 (HPV8), a cutaneous genus beta HPV type, has co-carcinogenic potential at sun-exposed sites in patients suffering from the inherited skin disease epidermodysplasia verruciformis (EV). We had previously shown that Langerhans cells responsible for epithelial immunosurveillance were strongly reduced at infected sites and that the HPV8 E7 protein interferes with the CCAAT/enhancer-binding protein (C/EBP)β to suppress the Langerhans cell chemokine CCL20. At the same time, however, we observed that EV lesions are heavily infiltrated with inflammatory immune cells, which is similar to the situation in HPV8 E6 transgenic mice. To identify critical inflammatory factors, we used a broad multiplex approach and found that the monocyte attracting chemokine CCL2 was significantly and strongly induced by HPV8 E6 but not E7-expressing HaCaT cells, which were used as a model for UV-damaged skin keratinocytes. Conditioned media from HPV8 E6-expressing keratinocytes enhanced CCL2-receptor (CCR2)-dependent monocyte recruitment in vitro, and macrophages predominated in the stroma but were also detected in the epidermal compartment of EV lesions in vivo. CCL2 induction by HPV8 E6 was even stronger than stimulation with the proinflammatory cytokine TNF-α, and both HPV8 E6 and TNF-α resulted in substantial suppression of the transcription factor C/EBPα. Using RNAi-mediated knockdown and overexpression approaches, we demonstrated a mechanistic role of the recently identified C/EBPα/miR-203/p63 pathway for HPV8 E6-mediated CCL2 induction at protein and transcriptional levels. Epithelial co-expression of p63 and CCL2 was confirmed in HPV8 E6-expressing organotypic air-liquid interface cultures and in lesional EV epidermis in vivo. In summary, our data demonstrate that HPV8 oncoproteins actively deregulate epidermal immune homeostasis through modulation of C/EBP factor-dependent pathways. While HPV8 E7 suppresses immunosurveillance required for viral persistence, the present study provides evidence that E6 involves the stemness-promoting factor p63 to support an inflammatory microenvironment that may fuel carcinogenesis in EV lesions.

Alloplasmic lines of beets with new cytoplasm from the wild genus Beta patula

Alloplasmic lines of beets with new cytoplasm from the wild genus Beta patula

Genomic variation in the genus Beta based on 656 sequenced beet genomes

Cultivated beets (Beta vulgaris ssp. vulgaris) constitute important crop plants, in particular sugar beet as an indispensable source of sucrose. Several species of wild beets of the genus Beta with distribution along the European Atlantic coast, Macaronesia, and throughout the Mediterranean area exist. Thorough characterization of beet genomes is required for straightforward access to genes promoting genetic resistance against biotic and abiotic stress. Analysing short-read data of 656 sequenced beet genomes, we identified 10 million variant positions in comparison to the sugar beet reference genome RefBeet-1.2. The main groups of species and subspecies were distinguishable based on shared variation, and the separation of sea beets (Beta vulgaris ssp. maritima) into a Mediterranean and an Atlantic subgroup as suggested by previous studies could be confirmed. Complementary approaches of variant-based clustering were employed based on PCA, genotype likelihoods, tree calculations, and admixture analysis. Outliers suggested the occurrence of inter(sub)specific hybridisation, independently confirmed by different analyses. Screens for regions under artificial selection in the sugar beet genome identified 15 Mbp of the genome as variation-poor, enriched for genes involved in shoot system development, stress response, and carbohydrate metabolism. The resources presented herein will be valuable for crop improvement and wild species monitoring and conservation efforts, and for studies on beet genealogy, population structure and population dynamics. Our study provides a wealth of data for in-depth analyses of further aspects of the beet genome towards a thorough understanding of the biology of this important complex of a crop species and its wild relatives.

A study on the adaptive potential of new sterile cytoplasm of Beta patula and Beta maritima L. from wild beets of the genus Beta L.: cold resistance and traits of early sugar accumulation in introduced alloplasmic lines

Purpose. Assessment of new sugar beet breeding genotypes by a set of economically valuable traits to determine their suitability for the efficiency of the process of managing the production of bioethanol with the study of the activity of photosynthesis according to the content of chlorophylls a and b, early accumulation of carbohydrates, tolerance to low temperatures, germination of apozygous seeds and using new plasma of the substituted lines of sugar beet with introduced sterile cytoplasms from wild species Beta patula and B. maritima L. and apozygous lines A9 with S vulgaris Owen's cytoplasm. Methods. Field methods were used (pollen-free regime for the reproduction of apozygotic seeds in conditions of isolation and seed monogermity of the seed plants), laboratory methods (selection of the best experimental genotypes for cold resistance, analysis of productivity and dynamics of carbohydrate accumulation). Results. Self-fertile pollen-sterile lines A9 Beta vulgaris Sxxzz rr with an apomictic method of seed reproduction of seeds (Yaltushkiv EBS) and commercial hybrids with early carbohydrate accumulation were selected for the recessive colour of the hypocotyl r-r- and gametophytic reduced parthenogenesis for hybridization according to the scheme: A9 Beta vulgaris Sxxzz rr × Beta vulgaris Mm Rr. The influence of cytoplasmic inheritance of B. maritima and B. patula on cold resistance indicators was studied and seed samples of the experimental genotypes No. 17225, 17221, 17222, 17220, 17226, 17223 were selected among substituted lines with seed germination rates at +4°C varying from 14.3 to 40.3%. Experimental genotypes of the substituted lines, grown in the conditions of pots were selected and examined by the indicators of early accumulation of sugars, which had values from 16.2 to 17.6% during four months of vegetation; photosynthetic activity with indicators of the content of chlorophyll varying from 2.06 to 1.32%, and chlorophyll b from 1.02 to 0.65%. Conclusions. Sugar beet hybrids, created with the use of cold-resistant substituted pollen-sterile lines of sugar beet, thanks to the natural evolution of the introduced cytoplasmic genome, ensure the extension of the growing season, high productivity, early accumulation of sugars and enrichment of the crop adaptation potential. The article contains the results of the study of the early carbohydrate accumulation, photosynthetic activity of selected experimental genotypes of the substituted sugar beet lines with high seed quality and 100% monogermity. Root crops of apomictic lines were selected based on R+r hypocotyl colour, generative reduced parthenogenesis, and studied for their specifics of seed set under the pollen-free regime.

944 Development of a novel PCR method to detect cutaneous and genus beta human papillomaviruse

944 Development of a novel PCR method to detect cutaneous and genus beta human papillomaviruse

Prevention and Treatment of HPV-Induced Skin Tumors.

Non-melanoma skin cancer (NMSC) is the most common cancer in humans with increasing incidence. Meanwhile, a growing body of evidence has provided a link between skin infections with HPV of the genus beta (betaHPV) and the development of cutaneous squamous cell carcinomas (cSCCs). Based on this association, the development of vaccines against betaHPV has become an important research topic. This review summarizes the current advances in prophylactic and therapeutic betaHPV vaccines, including progresses made in preclinical testing and clinical trials.

Biosystematic study Varity Beta vulgaris var. saccharifera from Chenopodiaceae of Salah Alden mid Iraq.

The present reseach has dealt with Biosystematic Beta vulgaris var. saccharifera Alef. of the genus Beta from the family Chenopodiaceae which has been recorded and distributed the first time in Salahuddin province-mid Iraq.
 The distinctive Morphological and anatomical study of roots, stem, leaves (petiole, blads) fruits, seeds and embryos and crystals. 
 The chemical study provided presence eight compounds (Five alkaloids as Cinnamic acid, Choline, Chenoabicine, Betaine, n-ferulouaspartate and three flavonoids as Quercetin , Isorhamnetin , Hispidulin ). 
 The study showed that genomic Beta vulgaris var. saccharifera. belongs to the C3 plants by revealing the location of the gene specialist pathways of photosynthesis atp B-rbc L present main bunds Molecular weight 700pb and primary cp DNA psb B-psb H present main bunds Molecular weight 800pb.
 The results of the anatomical study of the Leaf showed the absence Kranz anatomy while in the petiole the characters on medial plant betweenC3 and C4 plants were similar characters as fruits, seeds and embryos with already studied characters of other species which belong to this genus.

Methods of creating substituted lines for hybrid selection of sugar beet: plants of the species Beta vulgaris L. with new sterile cytoplasm of Beta patula L.

Purpose. Due to changing climatic conditions and the spread of new viral diseases, an important issue in beet growing is the expansion of plasma ulture using new sterile cytoplasm from wild species of the genus Beta L.
 as an alternative to Owen’s S-cytoplasm. The goal of this work was to obtain new breeding genotypes based on new cytoplasm. Methods. Cytological, biotechnological. field and laboratory. Results. Availability of recombination in the locus of grafted genes of one-year and two-year development cycles B+b- and hypocotyl colour R+r- was determined using the method of analytical crosses. Earlier we have proved the positive effect of sterility maintainer Beta vulgaris Nxxzz in replacement of the sterility maintainer genome based on our results on the selection of hypocotyl of green color r-rand two-year development cycle b-b- in the interspecific hybrids F2 obtained under the hybridization scheme Beta maritima L: ♀B1C maritima / ♂ Beta vulgaris Nxxzz (Роїк М. В., 2013). In the case of interspecific hybrids, in the conditions of sterile cytoplasm Beta patula L., only backcross offspring of the third cycle of saturating crosses were identified by one- and two-year developmental cycles. Seed bearing plants of BC3S patula of a two-year development cycle were characterized by spreading stems, multi-seeded fruits (3, 4 seeds) and sterile anthers. At the same time, monogermity and a two-year development cycle were restored against the background of sterile cytoplasm of Beta patula L. only among the seed bearing plants of the fourth cycle of saturating crosses. Recombinant genotypes with a red hypocotyl colour and a two-year development cycle BC4S patula R+r- were characterized by multigermity, chimericalness by sterility of CMS‑1 and CMS‑0 type and single- and multi-stem morphological types of anthers. The expression of CMS nuclear genes in the newly replaced BC5S patula lines was marked by high sterility rates of the CMS‑0 type; however, the fertility rates required additional rejection of multigerm seed plants. This is an indicator of the complex structure of the fertility locus in wild Beta patula L. and the special response of the nuclear genome of the sterility maintainers to the new cytoplasmic background. Experimental triploid hybrids with the new introductory sterile cytoplasm Beta patula L. were determined by high sugar content and dry matter content up to 29%. Conclusions. Alloplasmic lines based on the cytoplasm of the wild species Beta patula L are created. Their sugar content at the level of experimental triploid hybrids was 19.5% and 20.5% with a dry matter content of 25% —29%. Alloplasmic lines with a new BCC Beta patula L. recommended for use in the selection process of sugar beets.

Poly(I:C) Treatment Prevents Skin Tumor Formation in the Preclinical HPV8 Transgenic Mouse Model

Actinic keratoses and cutaneous squamous cell carcinomas are associated with infections with human papillomavirus of genus beta (betaHPV) in immunosuppressed patients. To date, targeted therapy against betaHPV-associated skin cancer does not exist because of the large number of betaHPV without defined high-risk types. In this study, we hypothesized that the activation of innate antiviral immunity in the skin, asymptomatically infected with betaHPV, induces an antitumor response by in situ autovaccination and prevents the formation of betaHPV-associated skin cancer. To test this, we used the preclinical keratin-14-HPV8 transgenic mouse model, which develops skin tumors after mechanical wounding. Remarkably, treatment with the antiviral immune response activating polyinosinic-polycytidylic acid (poly[I:C]) completely prevented cutaneous tumor growth. The induction of the IFN-induced genes Cxcl10 and Ifit1 by poly(I:C) depended on MDA5 activation. Increased numbers of total and activated CD4 and CD8 T cells were detected in poly(I:C)-treated skin. T cells were found in the skin of poly(I:C)-treated mice but not in the skin tumors of untreated mice. T-cell depletion showed a predominant role of CD4 T cells in poly(I:C)-mediated tumor prevention. Our findings identify the MDA5 ligand poly(I:C) as a promising candidate for in situ autovaccination approaches, which might serve as a treatment strategy against betaHPV-related skin diseases.

Seed productivity of alloplasmic lines of Beta patula and B. maritima with sterile cytoplasm under the conditions of apozygotic reproduction

Purpose. Revealing the effect of the cytoplasmic genome of replaced lines with the plasma of wild species Beta patula and B. maritima L., and apozygotic lines A4–A8 with the cytoplasm of S vulgaris Owen on the main factors of apozygotic reproduction, seed productivity, germination, monogermity and sterility as affected by the genetic origin of breeding material.
 Methods. The research was carried out in the Cytogenetics Laboratory (IBCSB), the Laboratory for Apomixis and Polyploidy of the Yaltushkiv EBS, and the Laboratory for Adaptive Breeding (Veselyi Podil EBS). Apozygotic seeds were obtained under a pollen-free regime according to the IBCSB’s Methods for Spatial Isolation and Parchment Insulators. Each seed bearer plant phenotype was determined during the flowering period by pollen sterility and partial flowering. Classification of plants was performed according to Owen (1945), with identifying plants of CMS-0, Type CMS-1, and CMS-2 types. The Monogermity of seed plants was assessed visually by the presence of separate fruits on the central shoots. In 2021, the roots of the replaced lines of the Veselyi Podil EBS were planted under the conditions of a pollen-free regime in the experimental field of the IBCSB. Seed production under apozygositic conditions was studied, taking into account the number of set fruits per 10-cm segment with 5 replications for each seed bearer. Germination was determined on the 10th day and germination vigour on the 5th day.
 Results. New sources of cytoplasmic male sterility (CMS) were obtained in the cytogenetics laboratory based on a genetic model of crossbreeding analysis, using differentiation and tools according to the marker-linked genes of hypocotyl color R+r-, and one / two-year development cycle B+b-. The analyzers for the nature of sugar beet sterility were sterility maintainers, dominant homozygotes for recessive genes of anthocyanin color, development cycle, partial fertility and sterility (NBeta vulgaris Sxxzz rr bb). Monogerm pollen-sterile lines with an apomictic way of seed reproduction (Yaltushkiv EBS) (A4–A8 Beta vulgaris Sxxzz rr), selected for the dominant color of the hypocotyl R+r-, stabilized for the trait of monogermity, 100% sterility and 2x gene ploidy, were characterized by low seed productivity. High rates of apozygotic seed development (80 to 96.4% of the number of set flowers) were observed against the background of the sterile cytoplasm of Beta maritima (Turkey). In the CMS BC4S patula line, the number of set apozygotic seeds ranges from 34 ± 0.3 to 39 ± 0.42, and the indicators of degenerated flowers under apozygotic regime varied from 31.2 to 54.3%. Isolated were seed plants with high self-reproduction, such as BC4S maritima Turkey, k.2/1, k.6/2, k.6/3 and k.3/4, k.9/4 on the background of new plasma of wild species of B. patula. The phenomenon of high self-reproduction of seeds (up to 98.5−96.4% of set flowers) was detected in line 21-011 CHS BC5S patula, which was comparable with hybrids and sterility maintainers (97.5−93.1%), which is determined by a special interaction of the beet nuclear genome of sugar beet and new plasma of wild species of the genus Beta L.
 Conclusions. The apomictic way of seed reproduction ensures the shortening of the breeding scheme for sugar beet due to high seed reproduction of mother parent in substituted lines with new plasma and differentiation by gametophytic reduction of parthenogenesis using morphological marker traits.

Transcription Properties of Beta-HPV8 and HPV38 Genomes in Human Keratinocytes.

Persistent infections with high-risk human papillomaviruses (HR-HPV) from the genus alpha are established risk factors for the development of anogenital and oropharyngeal cancers. In contrast, HPV from the genus beta have been implicated in the development of cutaneous squamous cell cancer (cSCC) in epidermodysplasia verruciformis (EV) patients and organ transplant recipients. Keratinocytes are the in vivo target cells for HPV, but keratinocyte models to investigate the replication and oncogenic activities of beta-HPV genomes have not been established. A recent study revealed, that beta-HPV49 immortalizes normal human keratinocytes (NHK) only, when the viral E8^E2 repressor (E8-) is inactivated (T. M. Rehm, E. Straub, T. Iftner, and F. Stubenrauch, Proc Natl Acad Sci U S A 119:e2118930119, 2022, https://doi.org/10.1073/pnas.2118930119). We now demonstrate that beta-HPV8 and HPV38 wild-type or E8- genomes are unable to immortalize NHK. Nevertheless, HPV8 and HPV38 express E6 and E7 oncogenes and other transcripts in transfected NHK. Inactivation of the conserved E1 and E2 replication genes reduces viral transcription, whereas E8- genomes display enhanced viral transcription, suggesting that beta-HPV genomes replicate in NHK. Furthermore, growth of HPV8- or HPV38-transfected NHK in organotypic cultures, which are routinely used to analyze the productive replication cycle of HR-HPV, induces transcripts encoding the L1 capsid gene, suggesting that the productive cycle is initiated. In addition, transcription patterns in HPV8 organotypic cultures and in an HPV8-positive lesion from an EV patient show similarities. Taken together, these data indicate that NHK are a suitable system to analyze beta-HPV8 and HPV38 replication. IMPORTANCE High-risk HPV, from the genus alpha, can cause anogenital or oropharyngeal malignancies. The oncogenic properties of high-risk HPV are important for their differentiation-dependent replication in human keratinocytes, the natural target cell for HPV. HPV from the genus beta have been implicated in the development of cutaneous squamous cell cancer in epidermodysplasia verruciformis (EV) patients and organ transplant recipients. Currently, the replication cycle of beta-HPV has not been studied in human keratinocytes. We now provide evidence that beta-HPV8 and 38 are transcriptionally active in human keratinocytes. Inactivation of the viral E8^E2 repressor protein greatly increases genome replication and transcription of the E6 and E7 oncogenes, but surprisingly, this does not result in immortalization of keratinocytes. Differentiation of HPV8- or HPV38-transfected keratinocytes in organotypic cultures induces transcripts encoding the L1 capsid gene, suggesting that productive replication is initiated. This indicates that human keratinocytes are suited as a model to investigate beta-HPV replication.

Insight into genomic organization of pathogenic coronaviruses, SARS-CoV-2: Implication for emergence of new variants, laboratory diagnosis and treatment options.

SARS-CoV-2 is a novel zoonotic positive-sense RNA virus (ssRNA+) belonging to the genus beta coronaviruses (CoVs) in the Coronaviridae family. It is the causative agent for the outbreak of the disease, COVID-19. It is the third CoV causing pneumonia around the world in the past 2decades. To date, it has caused significant deaths worldwide. Notably, the emergence of new genetic variants conferring efficient transmission and immune evasion remained a challenge, despite the reduction in the number of death cases, owing to effective vaccination regimen (boosting) and safety protocols. Thus, information harnessed from SARS-CoV-2 genomic organization is indispensable for seeking laboratory diagnosis and treatment options. Here in, we review previously circulating variants of SARS-CoV-2 designated variant of concern (VOC) including the Alpha (United Kingdom), Beta (South Africa), Gamma (Brazil), Delta (India), and recently circulating VOC, Omicron (South Africa) and its divergent subvariants (BA.1, BA.2, BA.3, BA.2.12.1, BA.4 and BA.5) with BA.5 currently becoming dominant and prolonging the COVID pandemic. In addition, we address the role of computational models for mutagenesis analysis which can predict important residues that contribute to transmissibility, virulence, immune evasion, and molecular detections of SARS-CoV-2. Concomitantly, the importance of harnessing the immunobiology of SARS-CoV-2 and host interaction for therapeutic purpose; and use of an in slilico based biocomputational approaches to achieve this purpose via predicting novel therapeutic agents targeting PRR such as toll like receptor, design of universal vaccine and chimeric antibodies tailored to the emergent variant have been highlighted.

Distribution of Biodiversity of Wild Beet Species (Genus Beta L.) in Armenia under Ongoing Climate Change Conditions.

The reported annual temperature increase and significant precipitation drop in Armenia impact the country’s ecosystems and biodiversity. The present study surveyed the geographical distribution of the local wild beet species under the ongoing climate change conditions. We showed that B. lomatogona, B. corolliflora and B. macrorhiza are sensitive to climate change and were affected to various degrees, depending on their location. The most affected species was B. lomatogona, which is at the verge of extinction. Migration for ca. 90 and 200–300 m up the mountain belt was recorded for B. lomatogona and B. macrorhiza, respectively. B. corolliflora was found at 100–150 m lower altitudes than in the 1980s. A general reduction in the beet’s population size in the native habitats was observed, with an increased number of plants within the populations, recorded for B. corolliflora and B. macrorhiza. A new natural hybrid Beta x intermedium Aloyan between B. corolliflora and B. macrorhiza was described and confirmed using chloroplast DNA trnL-trnF intergenic spacer (LF) and partially sequenced alcohol dehydrogenase (adh) of nuclear DNA. An overview of the wild beets reported in Armenia with the taxonomic background, morphological features, and distribution is provided. Conservation measures for preservation of these genetic resources are presented.

PERCEPTION TOWARDS COVID APPROPRIATE BEHAVIORS - A CROSS SECTIONAL SURVEY AMONG NURSING STUDENTS FROM SOUTH INDIA

Background: 2019-nCoV (also called SARS-CoV-2) is a single stranded RNA virus comingunder the same genus beta coronavirus as severe acute respiratory syndrome coronavirus 1(SARS-CoV-1) and Middle East respiratory syndrome coronavirus (MERS-CoV). Adherence to COVID-19 appropriate behavior plays a crucial element in tackling the pandemic crisis. Objectives: To assess the knowledge, perception and attitude and associated factors towards COVID appropriate behaviours among the nursing students. Methods: A cross sectional study was conducted among representative sample of nursing students (n=79) aged 18 years or more between May to July 2021. Data on COVID appropriate behaviours based on guidelines published in the official website by the Ministry of Health and Family welfare, Government of India were collected online using a self administered andsemi structured questionnaire. The descriptive and inferential statistics were analysed using SPSS version 22. Results: Among 79 participants, 452 (78.4%) were from urban residences and 47 (59.4%) were from nuclear families. The majority of them (79.7%) perceived COVID 19 as a serious condition. Newspapers (54%) and social media (47%) were considered as significant sources of information on COVID appropriate behaviours.

Human Beta Papillomavirus Type 8 E1 and E2 Proteins Suppress the Activation of the RIG-I-Like Receptor MDA5.

Persistent infections of the skin with the human papillomavirus of genus beta (β-HPV) in immunocompetent individuals are asymptomatic, but in immunosuppressed patients, β-HPV infections exhibit much higher viral loads on the skin and are associated with an increased risk of skin cancer. Unlike with HPV16, a high-risk α-HPV, the impact of β-HPV early genes on the innate immune sensing of viral nucleic acids has not been studied. Here, we used primary skin keratinocytes and U2OS cells expressing HPV8 or distinct HPV8 early genes and well-defined ligands of the nucleic-acid-sensing receptors RIG-I, MDA5, TLR3, and STING to analyze a potential functional interaction. We found that primary skin keratinocytes and U2OS cells expressed RIG-I, MDA5, TLR3, and STING, but not TLR7, TLR8, or TLR9. While HPV16-E6 downregulated the expression of RIG-I, MDA5, TLR3, and STING and, in conjunction with HPV16-E7, effectively suppressed type I IFN in response to MDA5 activation, the presence of HPV8 early genes showed little effect on the expression of these immune receptors, except for HPV8-E2, which was associated with an elevated expression of TLR3. Nevertheless, whole HPV8 genome expression, as well as the selective expression of HPV8-E1 or HPV8-E2, was found to suppress MDA5-induced type I IFN and the proinflammatory cytokine IL-6. Furthermore, RNA isolated from HPV8-E2 expressing primary human keratinocytes, but not control cells, stimulated a type I IFN response in peripheral blood mononuclear cells, indicating that the expression of HPV8-E2 in keratinocytes leads to the formation of stimulatory RNA ligands that require the active suppression of immune recognition. These results identify HPV8-E1 and HPV8-E2 as viral proteins that are responsible for the immune escape of β-HPV from the innate recognition of viral nucleic acids, a mechanism that may be necessary for establishing persistent β-HPV infections.

Role of human papillomavirus (HPV) in the development of skin cancer

The incidence of nonmelanoma skin cancer, the most common cancer in humans, continues to rise. The development of precancerous actinic keratoses and cutaneous squamous cell carcinoma (cSCC) is associated with infection with human papillomavirus (HPV) of genus beta (betaHPV). Persistent betaHPV infections in immunocompetent individuals are generally very well controlled by the immune system and largely asymptomatic. However, immunosuppression results in high levels of betaHPV in the skin and consequently increased viral oncoprotein activity, which in turn leads to asignificantly increased risk for skin cancer. However, even in immunocompetent individuals, the risk of cSCC increases with age as aresult of accumulated UV-induced DNA damage in the skin. In these patients, the mechanism of betaHPV-dependent carcinogenesis seems to be different from that observed in immunocompromised patients. The underlying mechanism of oncogenesis in immunocompetent patients is currently less well understood. This review summarizes the current research data, which provide compelling evidence that cutaneous papillomaviruses, particularly in interaction with UV light, promote skin carcinogenesis via a"hit-and-run" mechanism by enhancing the genotoxic effects of UV light in the initial phases of this multistep process. Furthermore, an overview of novel vaccination strategies against papillomaviruses that are currently tested in clinical trials is provided, which could significantly improve the treatment options for high-risk patients in the future.

Genomic distances reveal relationships of wild and cultivated beets

Cultivated beets (Beta vulgaris ssp. vulgaris), including sugar beet, rank among the most important crops. The wild ancestor of beet crops is the sea beet Beta vulgaris ssp. maritima. Species and subspecies of wild beets are readily crossable with cultivated beets and are thus available for crop improvement. To study genomic relationships in the genus Beta, we sequence and analyse 606 beet genomes, encompassing sugar beet, sea beet, B. v. adanensis, B. macrocarpa, and B. patula. We observe two genetically distinct groups of sea beets, one from the Atlantic coast and the other from the Mediterranean area. Genomic comparisons based on k-mers identify sea beets from Greece as the closest wild relatives of sugar beet, suggesting that domestication of the ancestors of sugar beet may be traced to this area. Our work provides comprehensive insight into the phylogeny of wild and cultivated beets and establishes a framework for classification of further accessions of unknown (sub-)species assignment.

Restriction of viral gene expression and replication prevents immortalization of human keratinocytes by a beta-human papillomavirus

SignificanceHigh-risk (HR) human papillomaviruses (HPV) from the genus alpha cause anogenital and oropharyngeal cancers, whereas the contribution of HPV from the genus beta to the development of cutaneous squamous cell cancer is still under debate. HR-HPV genomes display potent immortalizing activity in human keratinocytes, the natural target cell for HPV. This paper shows that immortalization of keratinocytes by the beta-HPV49 genome requires the inactivation of the viral E8^E2 repressor protein and the presence of the E6 and E7 oncoproteins but also of the E1 and E2 replication proteins. This reveals important differences in the carcinogenic properties of HR-HPV and beta-HPV but also warrants further investigations on the distribution and mutation frequencies of beta-HPV in human cancers.