Fusarium Oxysporum F. Sp. Lycopersici Research Articles

Crude Saponins from Chenopodium quinoa Willd. Reduce Fusarium Wilt Infection in Tomato Seedlings

Quinoa saponins are pentacyclic triterpene compounds composed of one triterpenoid glycoside and two different sugar chains. Previous studies have showed that natural quinoa saponins showed little or no antifungal activity, and there are few reports about their antifungal effects in recent decades. Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (FOL) is the most serious for tomatoes in the field and under greenhouse conditions. The main objective of this study was to investigate the effectiveness of different concentrations and application modes of crude saponins from quinoa bran against the causal pathogen of tomato wilt under a greenhouse experiment. The results showed that the anti-FOL activity of quinoa saponins was weak in vitro, but significantly enhanced in vivo. Tomato seeds and seedlings treated with solution of quinoa saponins at 0.5 and 1.0 g/L significantly reduced the disease incidence (%) of tomato Fusarium wilt. The treatment types of saponin solution have influence on the preventive effects (%) of tomato seedlings against Fusarium wilt, among them, root soaking > foliar spray > seed soaking. The treatment of seed soaking with quinoa saponins inhibited germination of tomato seeds to some extent. However, the germination rate of tomato seeds after saponin soaking was comparable to the chemical pesticide (thiram carboxin); therefore, it could be used to control tomato wilt disease. This is due to the fact that the antifungal activity of quinoa saponins in vivo was much higher than that in vitro when the saponin concentration was between 0.5–1.0 g/L, indicating that the antifungal activity of quinoa saponins may be achieved mainly by inducing resistance. This investigation supports the potential use of quinoa saponins as a supplier of antifungal compounds, and could be the foundation for a future study examining the use of quinoa bran as a new resource against FOL.

RETRACTED: Biocontrol of Fusarium wilt in tomato by Trichoderma spp

Tomato is the most economically important vegetable crop in Florida where produces the most fresh-market tomatoes in the United States. Fusarium wilt, caused by Fusarium oxysporum f. sp. lycopersici (FOL), is an important disease in tomato production in Florida, particularly due to lacking effective chemicals for soil treatment. Biological control is an alternative approach in the management of plant diseases, including those caused by soilborne pathogens. In this study, we evaluated two Trichoderma strains (T. atroviride T11 and T. asperellum T25) on their effects against FOL in vitro and in planta. T. asperellum T25 and its cultural filtrate showed inhibitory effects against mycelial growth of FOL in vitro and significantly reduced disease severity of Fusarium wilt in tomato in the greenhouse when T25 was mixed into soil at seeding. Although the mechanisms for biocontrol are still under investigation, results from this study indicate that T25 has great potential in the management of Fusarium wilt in tomato production.

Chromosome-scale assembly uncovers genomic compartmentation of Fusarium oxysporum f. sp. albedinis, the causal agent of Bayoud disease in date palm.

Date palm (Phoenixdactylifera) is the most significant crop across North Africa and the Middle East. However, the crop faces a severe threat from Bayoud disease caused by the fungal pathogen Fusarium oxysporum f. sp. albedinis (FOA). FOA is a soil-borne fungus that infects the roots and vascular system of date palms, leading to widespread destruction of date palm plantations in North Africa over the last century. This is considered the most devastating pathogen of oasis agriculture in North Africa and responsible for loss of 13 million trees in Algeria and Morocco alone. In this study, we present a chromosome-scale high-quality genome assembly of the virulent isolate Foa 44, which provides valuable insights into understanding the genetic basis of Bayoud disease. The genome assembly consists of 11 chromosomes and 40 unplaced contigs, totalling 65,971,825 base pairs in size. It exhibits a GC ratio of 47.77% and a TE (transposable element) content of 17.30%. Through prediction and annotation, we identified 20,416 protein-coding genes. By combining gene and repeat densities analysis with alignment to Fusarium oxysporum f. sp. lycopersici (FOL) 4287 isolate genome sequence, we determined the core and lineage-specific compartments in Foa 44, shedding light on the genome structure of this pathogen. Furthermore, a phylogenomic analysis based on the 3,292 BUSCOs core genome revealed a distinct clade of FOA isolates within the Fusarium oxysporum species complex (FOSC). Notably, the genealogies of the five identified Secreted In Xylem (SIX) genes (1, 6, 9, 11 and 14) in FOA displayed a polyphyletic pattern, suggesting a horizontal inheritance of these effectors. These findings provide a valuable genomics toolbox for further research aimed at combatting the serious biotic constraints posed by FOA to date palm. This will pave the way for a deeper understanding of Bayoud disease and facilitate the development of effective diagnostic tools and control measures.

Endophytic bacteria as biological agents to control fusarium wilt disease and promote tomato plant growth

Plant endophytic bacteria are symbiotic bacteria that live in plant tissues and may play a role in disease control and/or plant growth promotion. In this study, six plant endophytic bacterial isolates, Arthrobacter sp. AM08, Pseudomonas aeruginosa AJ14, P. mosselii AB06, Bacillus cereus AP12, B. thuringiensis AK08 and Serratia marcescens AS09, were tested for their ability to control Fusarium oxysporum f. sp. lycopersici (FOL) and to promote the growth of tomato plant. The isolates were evaluated for their ability to produce hydrolytic enzymes (cellulase, protease and chitinase), hydrogen cyanide (HCN), indole 3-acetic acid (IAA), 1-aminocyclopropane 1-carboxylic acid (ACC) deaminase, and siderophores. The activity of cellulase, protease and chitinase enzymes was detected in all the isolates studied, whereas the highest HCN activity was observed in P. aeruginosa. The activity of IAA, ACC deaminase, and siderophore was also observed in all isolates, with B. cereus, P. mosselii, and S. marcescens being the highest producers of IAA and B. thuringiensis being the highest producer of siderophores. All isolates produced ACC deaminase at almost the same level. Application of the isolates to tomato seeds prolonged FOL incubation time, reduced disease incidence, and shortened xylem discoloration length compared to the controls, confirming the ability of the isolates to control FOL. In addition, all tested isolated showed plant growth promoting activity, as indicated by increased plant height and root length. The study showed that the endophytic bacteria are capable of controlling FOL and promoting the growth of tomato plant, revealing their potential to be developed as biocontrol agents.

Anaerobic digestion of lignocellulosic waste for enhanced methane production and biogas-digestate utilization

Lignocellulosic biomass is an important source for nutrient management in agricultural systems and has a largely unexploited potential for biogas production. The digestates from the anaerobic digestion (AD) process are widely used in agriculture systems due to their nutrient composition and organic matter, making them a valuable source for plants. As a result, methane (CH4) production from AD of lignocellulosic biomass waste, such as rice straw, corn stalk, and grape stalk, was determined in this study, and their anaerobic digester residues were studied at various concentrations to investigate their potential on tomato plant growth and fruit yield. The biogas and CH4 yields of the pretreated rice straw, corn stalk, and grape stalk were determined through the AD process for 72 days, and the results revealed a gradual increase in the cumulative biogas and CH4 production until the end of the AD process (72 days). The cumulative biogas from rice straw, corn stalk, and grape stalk was 359.3, 309.9, and 215.1 L/kg VS, respectively. However, the biogas production of rice straw was higher than that of corn stalk, and grape stalk by 15.6% and 67%, respectively. The cumulative CH4 yield of rice straw was higher than that of corn stalk, and grape stalk by 21.1% and 76.3%, respectively. The results also showed that tomato growth significantly increased under grape stem residue (GSR) more than under rice straw residue (RSR) and corn stalk residue (CSR), as well as under untreated control and control infected with Fusarium oxysporum f. sp. lycopersici (FOL). The increase in bioreactor residue concentration resulted in a significant increase in tomato growth parameters, crop yield, and tomato quality. The results confirmed that 20% of GSR increased the tomato's physical and chemical properties compared with control, RSR, and CSR. The soil content of total nitrogen, phosphorus, and potassium gradually increased with the increase in residue concentrations before and after AD, and the maximum concentration was obtained at 25% of GSR. Therefore, anaerobic digestate could be economically viable, which can be a good solution for sustainable lignocellulosic biomass waste management and plant growth.

Molecular Analysis of MgO Nanoparticle-Induced Immunity against Fusarium Wilt in Tomato.

Fusarium wilt, caused by Fusarium oxysporum f. sp. lycopersici (FOL), is a devastating soilborne disease in tomatoes. Magnesium oxide nanoparticles (MgO NPs) induce strong immunity against Fusarium wilt in tomatoes. However, the mechanisms underlying this immunity remain poorly understood. Comparative transcriptome analysis and microscopy of tomato roots were performed to determine the mechanism of MgO NP-induced immunity against FOL. Eight transcriptomes were prepared from tomato roots treated under eight different conditions. Differentially expressed genes were compared among the transcriptomes. The Kyoto Encyclopedia of Genes and Genomes enrichment analysis revealed that in tomato roots pretreated with MgO NPs, Rcr3 encoding apoplastic protease and RbohD encoding NADPH oxidase were upregulated when challenge-inoculated with FOL. The gene encoding glycine-rich protein 4 (SlGRP4) was chosen for further analysis. SlGRP4 was rapidly transcribed in roots pretreated with MgO NPs and inoculated with FOL. Immunomicroscopy analysis showed that SlGRP4 accumulated in the cell walls of epidermal and vascular vessel cells of roots pretreated with MgO NPs, but upon FOL inoculation, SlGRP4 further accumulated in the cell walls of cortical tissues within 48 h. The results provide new insights into the probable mechanisms of MgO NP-induced tomato immunity against Fusarium wilt.

In vitro antifungal activity of some common botanicals against fungal wilt caused by Fusarium oxysporum of tomato (Solanum lycopersicum L.)

Fusarium oxysporum f. sp. lycopersici is an important disease that causes wilt disease in tomato crop. Management through chemical fungicides cause environmental problems and are toxic to non-target organisms as well. Plant metabolites and plant extract appear to be one of the better alternatives as they are known to have minimal environmental impact. In an approach towards the development of eco-friendly management, in vitro antifungal assay was conducted against Fusarium oxysporum f. sp. lycopersici (FOL), using plant extracts of seven botanicals. Out of them, three extract proved to be potential in inhibiting the growth of the FOL viz., Allium sativum (77.43%), Pongamia glabra (73.06%), Azadirachta indica (72.382%). The poison food technique was employed for the evaluation of antifungal activity of the extracts at three different concentrations (10%, 15%and 20%) on mycelial growth of FOL. This study indicates that the botanical extracts could be a good alternative in developing a potent plant based fungicides which can be used in organic farming for the management of Fusarium oxysporum f. sp. Lycopersici.

Survey on the incidence of Fusarium wilt of tomato incited by Fusarium oxysporum f. sp. lycopersici (FOL) in major tomato growing areas of Khordha district, Odisha, India

One of the main issues with tomato production is fusarium wilt, often known as vascular wilt or Fusarium oxysporum f. sp. lycopersici. In order to determine the disease incidence of fusarium wilt in several tomatogrowing regions of the Khordha district, Odisha, in the years 2021–22 and 2022–23, a survey was conducted. A total of ten villages (one village from each block) were visited, and each village’s five fields were examined. This was done by counting the number of sick or infected plants in each field’s randomly chosen five-byfive-meter tomato field. Pichukuli village (25.70%), Jankia village (23.69%), and Jagannathpur village (22.59%) had the highest per cent disease incidence. Nachuni village (16.72%) and Siko (17.28%) had the lowest per cent disease incidence, respectively. The survey’s findings showed that there was a disease incidence that was causing output and crop losses for tomatoes.

Endophytic Beauveria bassiana Induces Oxidative Stress and Enhances the Growth of Fusarium oxysporum-Infected Tomato Plants.

Studying the mechanisms through which endophytic fungi confer protection to host plants against parasites will contribute toward elucidating the endophytic fungi-plant-pathogen relationship. In this study, we evaluated the effects of endophytic Beauveria bassiana on the antioxidant activity, oxidative stress, and growth of tomatoes infected with the fusarium wilt pathogen, Fusarium oxysporum f. sp. lycopersici (FOL). Tomato seedlings were inoculated with B. bassiana conidia and then contaminated with FOL experimentally. Four treatments (Control [T1], FOL only [T2], B. bassiana only [T3], and B. bassiana and FOL [T4]) were assessed. The plants from the B. bassiana and FOL treatment (T4) were significantly taller (DF = 3, 56; p < 0.001) and produced more leaves and aerial part biomass than those treated with only FOL (T2). Remarkably, plants in the two treatments with FOL (T2 and T4) had the lowest antioxidant activities; meanwhile, plants from the FOL treatment (T2) had the lowest ROS (superoxide and hydroxyl radicals) contents. Broadly, strong positive correlations between ROS and all the plant growth parameters were recorded in this study. While the current results revealed that the endophytic entomopathogen B. bassiana enhanced antioxidant capacity in plants, it did not improve the antioxidant capacity of F. oxysporum-infected plants. It is possible that the pathogenic FOL employed a hiding strategy to evade the host immune response and the antagonistic actions of endophytic B. bassiana. In conclusion, B. bassiana inoculum enhanced the growth of tomatoes infected with FOL, induced higher oxidative stress in both F. oxysporum-infected and -uninfected tomatoes, and improved antioxidant activities in plants inoculated with B. bassiana only.

EVALUATION OF ANTIFUNGAL POTENTIAL AND PHYTOCHEMICAL ANALYSIS OF A MEDICINAL HERB, Centaurium erythraea

Medicinal herbs are promising source of biologically active phytochemicals, many of which possess antifungal activities against phytopathogens. This research presents in vitro antifungal activity and analysis of a medicinally important herb Centaurium erythraea Rafn extracts against a highly problematic pathogen of tomato namely Fusarium oxysporum f. sp. lycopersici (FOL). In-vitro results prominently disclosed that the extracts showed good percentage growth inhibition (PGI) against FOL. Methanolic extract of C. erythraea at 200 mg mL-1 showed growth inhibition 93.3% while the synthetic fungicide benomyl showed highest growth inhibition of 90.2% at the same concentration. Phytochemical analysis indicated that methanolic extracts of this plant possess phytochemicals of all the major classes such as alkaloids, steroids, terpenoids, saponins etc. This study concludes that the extracts of C. erythraea are the best alternatives to fungicides to control Fusarium wilt pathogen of tomato.

Antifungal Volatilomes Mediated Defense Mechanism against Fusarium oxysporum f. sp. lycopersici, the Incitant of Tomato Wilt.

In this study, the volatilomes of naturally growing plant leaves were immobilized in a suitable substrate to enhance vapors’ diffusion in the soil to eradicate the Fusarium wilt pathogens in Tomato. Volatilomes produced by Mentha spicata leaves immobilized in vermiculite ball was found to be effective and exhibit 92.35 percent inhibition on the mycelial growth of Fusarium oxysporum f. sp. lycopersici (FOL). Moreover, the volatilomes of M. spicata immobilized vermiculite balls were tested based on the distance traveled by the diffused volatilomes from the ball and revealed that the volatilomes of M. spicata traveled up to 20 cm distance from the center of PVC (Polyvinly chloride) chamber showed maximum reduction in colony growth of FOL at 12th day after inoculation. Tomato plants inoculated with FOL revealed increased expressions of defense gene, pathogenesis related protein (PR1) with 2.63-fold after 72 h and the gene, transcription factor (WRKY) increased with 2.5-fold after 48 h on exposure to the volatilomes of M. spicata vermiculite balls. To the best of our knowledge, this is the first report on development of volatilomes based vermiculite ball formulations. This result indicated that the volatilomes of M. spicata are promising phyto-fumigants for management of Tomato Fusarial wilt.

In Vitro and In Vivo Biocontrol of Tomato Fusarium Wilt by Extracts from Brown, Red, and Green Macroalgae

Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (FOL) in tomatoes is globally recognized as one of the most significant tomato diseases, both in fields and in greenhouses. Macroalgae contain a diversity of bioactive complexes. This research was carried out to assess the value of the extracts from three macroalgae (Sargassum dentifolium belongs to Phaeophyta, Gracilaria compressa belongs to Rhodophyta, and Ulva lactuca belongs to Chlorophyta) against wilt disease in tomato plants. The fungal pathogen was isolated from diseased tomato plants growing in several parts of Saudi Arabia. Isolates of the pathogen were identified by morphological and molecular methods. Three organic solvents, in addition to water, were used for extraction to assess the effect of reducing FOL hyphal growth on potato dextrose agar (PDA). Radial reductions in pathogen hyphal growth were seen with all of the solvent and water extracts, but the three macroalgae methanol extracts that were tested showed the greatest reduction in pathogen hyphal growth. The total phenol content of the S. dentifolium extract was higher than that of the other two macroalgae. The phenolic compounds showed variability in all of the extracts that were identified and calculated by high-performance liquid chromatography (HPLC). Phloroglucinol (7.34 mg/g dry weight), vanillic acid (7.28 mg/g dry weight), and gallic acid (6.89 mg/g dry weight) were the phenolic compounds with the highest concentrations in the S. dentifolium, G. compressa, and U. lactuca extracts, respectively. The mycelium of FOL treated with a crude macroalgae extract of tested at 100 µg/mL was examined with a scanning electron microscope. The results showed an obvious difference between the extract-treated and untreated hyphae. The extract-treated hyphae collapsed and bruised, as well as; empty and dead. In the greenhouse experiment, S. dentifolium powder was used to evaluate its effect on disease decline. It led to a decrease in disease severity of 40.8%. The highest total yield (560.8 g) was obtained from the plants treated with S. dentifolium powder. We recommend the use of macroalgae extracts to combat fungal phytopathogens. Because chemical fungicides are extremely toxic to humans and the environment, macroalgae extracts are a good alternative that can be widely and safely used in the field.

In Vitro Screening of New Biological Limiters against Some of the Main Soil-Borne Phytopathogens

This study explored the role of Aphanocladium album (strain MX95), Pleurotus ostreatus (strain ALPO) and Pleurotus eryngii (strain AL142PE) as potential biological limiters. MX95, ALPO and AL142PE were screened under laboratory studies against Phytophthora nicotianae (PN), Fusarium oxysporum f. sp. radicis-lycopersici (FORL), Fusarium oxysporum f. sp. lycopersici (FOL), Fusarium solani (FS), Sclerotinia minor (SM), Sclerotinia sclerotiorum (SS), Athelia (Sclerotium) rolfsii (AR) and Verticillium dahliae (VD). The radial growth inhibition and the over-growth of potential antagonists on the target organisms were used to assess the interactions in the in vitro dual culture plate assay. The antagonistic ability of each challenge isolate was evaluated by calculating an index of the antagonism (AI) based on the interaction type in the dual cultures. MX95, reducing the growth of SS (20%) and FS (40%), displayed deadlock at mycelial contact against FOL and FORL, deadlock at distance versus VD and completely over-grew PN and SM. ALPO reduced (43 to 88%) the mycelial growth of tested pathogens except FORL and replaced PN and VD. AL142PE reducing (53 to 67%) SS, VD, FS and FOL mycelial growth and completely over-grew PN. AR showed combative ability against all the experienced biological limiters. Based on the results of the AI values, MX95 (AI = 16.5) was considered an active antagonist, while ALPO (AI = 11.5) and AL142PE (AI = 12.0) were moderately active antagonists. Strains MX95, ALPO and AL142PE were suitable as environment-friendly potential biocontrol agents to manage some of the main soil-borne agents of foot, root, soft rot and wilt diseases. These results are the first step in the assessment of the potential capacity of these organisms as biological limiters. Nevertheless, additional experiments should be performed for the translation to the field conditions in plant protection against soil-borne plant pathogens. In particular, the optimisation of dose and application time validation should be performed for a solid conclusion about the competitive ability of MX95, ALPO and AL142PE and the usefulness of potential biological limiters.

Alternative Control of Tomato Wilt Using the Aqueous Extract of Calotropis procera

Calotropis procera (Aiton) Dryand (commonly known as the apple of sodom, calotrope, and giant milkweed) is an evergreen, perennial shrub of the Apocynaceae family, and is mainly found in arid and semi-arid regions. Previous studies have established the toxic effects of Calotropis procera (C. procera) (Aiton). Its extract is used as one of the vital alternatives to pesticides due to its effective impacts on several pathogens and to combat insect pests that cause severe damage to several crops, but so far, its effects on combating Fusarium oxysporum f. sp. lycopersici (FOL) have not yet been evaluated. Therefore, the current study focuses on evaluating the effects of the aqueous extract of this plant on FOL by studying physicochemical indicators. In Saudi Arabia and many other countries, such disease is considered as one of the critical factors affecting tomato growth and production. For the control of Fusarium wilt disease (Fwd), many strategies have been developed, but are limited in their use. Ten isolates of the pathogens were obtained from diseased tomato plants. These isolates were able to exhibit symptoms of tomato wilt, and they varied in their virulence. Isolate No. 5 caused the highest severity of the disease (73%). According to these results, we used this isolate in the following experiment, which was identified by ITS sequences as F. oxysporum f. sp. lycopersici. Following intensive screening studies, we selected aqueous plant extract of C. procera to study its effectiveness against Fwd of tomato plants and their antifungal activity or induce systemic resistance in plants. All concentrations of C. procera extracts suppressed growth of the pathogen. The highest reduction of mycelia growth was obtained by aqueous extract at 15%, it reduced the pathogen growth to 70.2%, relative to the control. In greenhouse conditions, the aqueous C. procera extract at 5, 10, and 15% significantly reduced Fwd of the tomato compared to the infected control (52.01, 69.86, and 83.6%, respectively). The use of aqueous C. procera extract at 5, 10, and 15% significantly enhanced the fresh and dry weight of tomato plants (g plant−1) compared to inoculated plants (for fresh weight: 50, 66.6, and 86.6 and for dry weight: 60, 100, and 120%, respectively). Total phenols and flavonoids as well as antioxidant enzymes were increased in inoculated or non-inoculated tomato plants after being treated with aqueous extracts of C. procera.

Biocontrol Activity of Aspergillus terreus ANU-301 against Two Distinct Plant Diseases, Tomato Fusarium Wilt and Potato Soft Rot.

To screen antagonistic fungi against plant pathogens, dual culture assay (DCA) and culture filtrate assay (CFA) were performed with unknown soil-born fungi. Among the different fungi isolated and screened from the soil, fungal isolate ANU-301 successfully inhibited growth of different plant pathogenic fungi, Colletotrichum acutatum, Alternaria alternata, and Fusarium oxysporum, in DCA and CFA. Morphological characteristics and rDNA internal transcribed spacer sequence analysis identified ANU-301 as Aspergillus terreus. Inoculation of tomato plants with Fusarium oxysporum f. sp. lycopersici (FOL) induced severe wilting symptom; however, co-inoculation with ANU-301 significantly enhanced resistance of tomato plants against FOL. In addition, culture filtrate (CF) of ANU-301 not only showed bacterial growth inhibition activity against Dickeya chrysanthemi (Dc), but also demonstrated protective effect in potato tuber against soft rot disease. Gas chromatography-tandem mass spectrometry analysis of CF of ANU-301 identified 2,4-bis(1-methyl-1-phenylethyl)-phenol (MPP) as the most abundant compound. MPP inhibited growth of Dc, but not of FOL, in a dose-dependent manner, and protected potato tuber from the soft rot disease induced by Dc. In conclusion, Aspergillus terreus ANU-301 could be used and further tested as a potential biological control agent.

Effect of endophytic Bacillus and arbuscular mycorrhiza fungi (AMF) against Fusarium wilt of tomato caused by Fusarium oxysporum f. sp. lycopersici

BackgroundFusarium wilt of tomato caused by Fusarium oxysporum f. sp. lycopersici (FOL) is a serious disease that causes significant economic losses in tomato production. Seventeen endophytic Bacillus isolates from tomato roots of Meghalaya were tested for antagonistic and plant growth promotion activities. Dominating arbuscular mycorrhiza fungi (AMF) spores were isolated from the rhizosphere soils of tomato grown in Meghalaya. The effect of different combinations of AMF and endophytic Bacillus on Fusarium wilt severity and growth of tomato plant under pot and field conditions was studied.ResultsThe endophytic Bacillus isolates ERBS51 and ERBS10 showed a maximum inhibition against FOL, with 58.43 and 55.68%, respectively, in a dual culture experiment. ERBS51 and ERBS10 were identified as Bacillus velezensis and Bacillus sp., respectively, based on 16s rRNA sequencing. Both isolates were found positive for iturin A, surfactin, bacillomycin D, protease, cellulase, pectinase, alpha-amylase, siderophore, ammonia production and ZnCO3 solubilization. Funneliformis mosseae and Glomus fasciculatum were the dominating AMF species in tomato rhizosphere of Meghalaya. The result of pot and field experiments revealed that out of all the treatments, combination of Funneliformis mosseae + Glomus fasciculatum + Bacillus velezensis + Bacillus sp. was shown to be the best in reducing the severity of Fusarium wilt to 77.44 and 66.74%, respectively. F. mosseae + G. fasciculatum + B. velezensis + Bacillus sp. also recorded the highest in most growth attributes and yield.ConclusionsEndophytic Bacillus (B. velezensis and Bacillus sp.) and AMF (F. mosseae and G. fasciculatum) were safe and effective biocontrol agents against Fusarium wilt of tomato.

Biological control of Fusarium tomato-wilt disease by cyanobacteria Nostoc spp.

This study investigated the effect of foliar application of extract and culture of Nostoc calcicola and Nostoc linckia on the Fusarium oxysporum f. sp. lycopersici (FOL) that infects tomatoes (Solanum lycopersicum) plant in vitro and in vivo. Cyanobacterial isolates were isolated from saline soils at El-Hamoul and Seidy Salem locations Kafr Elsheikh, Egypt, and identified to be N. calcicola and N. linckia Bioactive compounds of extract were analyzed by Gas chromatography-mass spectrometry (GC-MS). Dry weight, carotene, chlorophyll content, and total phenolic compounds of isolates were measured. Plant height, dry weight, fruit number, and fruit weight of tomatoes were estimated. GC/MS analysis showed 49 and 35 bioactive compounds in extracts of N. calcicola and N. linckia, respectively. N. calcicola possesses the highest values of chlorophyll a, carotenoid, and total phenol contents in dry weight compared with N. linckia. After 100days of tomato growth, the results showed the highest yield of tomato fruits with the application of N. calcicola and N. linckia compared with the untreated plants and the plants which were infected with Fusarium, suggesting that N. calcicola and N. linckia can serve as a new bioagent for biological control of the soil fungus Fusarium oxysporum f. sp. lycopersici (FOL).

Management Fusarium Wilt Disease in Tomato by Combinations of Bacillus amyloliquefaciens and Peppermint Oil

The most important disease of tomato is Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (FOL). To control this disease, this study examined the combined use of bacterial bioagents and peppermint oil (PO). Seven bacterial isolates were collected from tomato plant rhizospheres and tested in vitro against FOL. The highest growth inhibition against FOL was shown by isolate No.3. This isolate was identified using 16S rRNA sequencing gene as Bacillus amyloliquefaciens (BA). Peppermint oil tested at different concentrations (1, 2, and 3%) against FOL mycelial growth in vitro showed the highest inhibition at 3%. The effects of BA, PO, and BA + PO in vitro on the seed germination and seedling vigor index of the tomato cv. ‘Tala F1’ was also tested. All “BA, PO, and BA + PO” treatments increased the percentage of germinated seeds and seedlings’ main shoots and root length compared to control treated seeds. The BA, PO, and BA + PO treatments were further tested under greenhouse and field conditions with pre-treated seedlings in FOL-contaminated soil. Under greenhouse conditions, each treatment decreased disease severity compared to untreated seedlings. Under field conditions, pre-treatment of tomato seedlings with BA and PO treatments reduced disease severity greater than BA + PO in combination and the mock-treated plants (66.6% for BA, 66.6% for PO and 55.3% for BA + PO, respectively). These findings support the use of BA or PO as bio-control agents against F. oxysporum in tomato. The interplay between peppermint oil, B. amyloliquefaciens, F. oxysporum, and the host plant requires further study to identify the causative mechanism for this increased disease resistance.

Genome mining and In‐silico determination of secondary metabolites of bacteria against Fusarium oxysporum f. sp. Lycopersici

AbstractFusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (FOL) is a devastating global plant fungal disease particularly in tomatoes leading to serious economic losses. The aim of this study was to determine an in silico effective antifungal metabolite against two important FOL proteins. An in silico ligand–protein interaction was carried out by genome mining and molecular docking of the best ligand‐producing strains of bacteria using AutoDock and antiSMASH tools. The secondary metabolites obtained from different bacteria selected for biocontrol agents (BCA) were docked against SIX and TOM proteins. The selected compounds were docked in the active site of both proteins while random starting positions, torsion angles were established for all ligands. Based on the protein–ligand interactions, the best inhibitor of SIX and TOM protein was xanthobaccine A from Lysobacter sp. strain SB‐K88. On the other hand, the best BCAs compound was heat‐stable antifungal factor obtained from L. enzymogenes, viginiafactin (Pseudomonas sp. QS1027), massetolide A (P. fluorescenss 5101), bicorlnutin A1 and A2 (Xenorhabdus budapestensis) which showed similarity scores viz., 1.25 (with domain NRP, Polyketide), 1.09 (NRP domain), 1.06(NRP domain), 1.00 (NRP domain). The results of our findings suggest Lysobacter sp. as a good biocontrol agent with active biosynthetic gene clusters and as a suitable substitute for agrochemicals. The output of this study will be useful in future management of F. oxysporum f. sp. lycopersici with other plant pathogen and help in crop improvement.

Effect of soil drenching with humic acid, L-methionine and phosphoric acid on Fusarium wilt and induction of enzymes related to oxidative stress and defense in tomato plants

The main objective of the present study was to evaluate the efficacy of humic acid, L-methionine and phosphoric acid as a soil application for controlling Fusarium wilt disease of tomato and their effect on gene expression alterations using protein and isozyme profiling. Two isolates from each of Fusarium oxysporum f. sp. lycopersici (FOL) and F. solani (FS) were obtained from diseased tomato plants. According to pathogenicity tests, all tested isolates were able to infect tomato cultivars; cv. Super Jackal and cv. 745 under greenhouse conditions. In in vitro studies, the addition of humic acid, L-methionine and phosphoric acid to the medium at different concentrations reduced the growth of the tested isolates of the pathogens. Under greenhouse conditions, the addition of humic acid at 2%, 2 g/L of L-methionine and 0.6% of phosphoric acid to infested soil after sowing significantly decreased percentage disease severity of Fusarium wilt at both seasons (2016/17 and 2017/18). Protein bands at molecular weight 47.2 KD, 38.2 KD, 16.3 KD and 15.6 KD appeared only in treated plants. New esterase, peroxidase, chitinase and superoxide dismutase isozyme bands were detected in all treatments while not appear in the control. This results revealed that these treatments were able to induced new protein which increases resistance in tomato plants to Fusarium wilt disease.