Fungal Dispersal Research Articles

Viability of Moniliophthora roreri on Cocoa Beans Under Microfermentation and Long-Term Survival on Carrier Materials.

The viability of Moniliophthora roreri inoculum was evaluated during the microfermentation process of diseased and healthy pulp-seed masses and on a range of carrier materials: aluminum, cloth, glass, paper, plastic, raffia, and rubber tire. Fungal survival was assessed before the microfermentation (0 h) and every 24 to 96 h by the growth of colonies in potato-dextrose-agar (PDA) and sporulation in seed shells. Colonies of M. roreri and sporulation on seed shells were observed from seeds not submitted to microfermentation. No growth was recovered from diseased cocoa beans after 48 h under the microfermentation. The viability of M. roreri spores recovered from carrier materials was evaluated at 7, 15, 30, 45, and 100 days after inoculation (DAI) by collecting spores and plating them on Sabouraud dextrose yeast extract agar amended with chloramphenicol (50 mg l1). The viability was determined by counting germinated and ungerminated spores under a light microscope (40×) after incubating in a moist chamber at 26 ± 2°C for 72 h. Spores maintained long-term viability on all tested carrier materials toward the end of the experiment (overall 26%) with significant differences (<0.05) among them. Maximum spore viability occurred at 7 and 15 DAI, with cloth and plastic carrier materials considered at high risk of acting as vehicles for the fungal spread. Mathematical models of spore viability over time were fit to the data using the Bayesian information criterion. Findings confirmed the importance of the fermentation process to hamper M. roreri growth and the potential of carrier materials for fungal dispersal.

Species composition of micromycetes at the Progress, Vechernyaya Gora, and Novolazorevskaya stations (East Antarctica)

The survival of fungi in Antarctica is a consequence of both ecological selection and evolutionary adaptation expressed at the physiological, metabolic, structural, and genetic levels. The study of the biological diversity of Antarctic micromycetes will help us to better understand the pathways of fungal dispersal in the biosphere, as well as to broaden our understanding of their role in extreme ecosystems. In addition, micromycetes of extreme habitats are the promising objects of biotechnology.The purpose of the work is to study the biological diversity of microscopic fungi on natural and anthropogenically introduced substrates in the East Antartica research areas of Progress, Novolazarevskaya, and Mount Vechernyaya stations.Traditional isolation methods were used to isolate micromycetes in culture. To determine the species composition, microbiological and molecular genetic methods were used. As a result of mycological analysis, 46 species of micromycetes from 22 genera and 3 phylum were identified. The taxonomic analysis was made and the dominant genera of micromycetes were identified: Thelebolus, Penicillium, Acremonium, Aspergillus, Cladosporium, Geomyces, Cadophora, Rhodotorula, Cryptococcus. The temperature-dependent growth features of micromycetes were analyzed: most of the isolated species were psychrotrophic. The greatest species diversity of micromycetes was noted in soils with plant and animal inclusions, the smallest – on stony substrates.

Presence of non-symbiotic yeasts in a symbiont-transferring organ of a stag beetle that lacks yeast symbionts found in other stag beetles

Dispersal from wood to wood is essential for wood-inhabiting fungi and wood-inhabiting insects play an important role in the dispersal success of such fungi. However, it is poorly understood whether wood-inhabiting insects which change the habitats from wood to non-wood environments can contribute to the fungal dispersal. Larvae of most stag beetles (Coleoptera: Lucanidae) are wood feeders, while adults are sap feeders. Female adults of lulcanids possess specialized organs (mycetangia) for transportation of fungal symbionts and harbor specific yeasts (e.g., Scheffersomyces spp.) within. Here, we report that the lucanid Aegus subnitidus harbors non-specific yeasts facultatively in mycetangia. We conducted yeast isolation from mycetangia and hindguts of female adults, in a larval gallery in wood-associated materials, and in female-visiting fermented tree sap using culture-dependent methods. Less than half of the females carried a total of 20 yeast species with small amounts using mycetangia and a female harbored up to five species, suggesting the absence of an intimate association with specific yeasts that are found in other lucanids. Yeast species compositions markedly differed between the larval gallery and sap. Most yeasts from the larval galley exhibited xylose-assimilation abilities, while few yeasts from sap did. Mycetangial yeasts comprised a combination from both sources. In hindguts, most yeasts were found in sap (> 70%) with no yeasts in the larval gallery. Sap-associated yeasts in each female mycetangium were also obtained from the female-visiting sap patch, while mycetangial, larval gallery-associated yeasts were absent from the patch, suggesting the survival success of larval gallery-associated yeasts in mycetangia through sap patches. Therefore, wood-inhabiting insects that possess mycetangia can potentially act as vectors of non-symbiotic wood-inhabiting yeasts dispersing from wood to wood via other environments.

Soil fungal diversity and assembly along a xeric stress gradient in the central Namib Desert

The Namib Desert of south-western Africa is one of the oldest deserts in the world and possesses unique geographical, biological and climatic features. While research through the last decade has generated a comprehensive survey of the prokaryotic communities in Namib Desert soils, little is yet known about the diversity and function of edaphic fungal communities, and even less of their responses to aridity. In this study, we have characterized soil fungal community diversity across the longitudinal xeric gradient across the Namib desert (for convenience, divided into the western fog zone, the central low-rainfall zone and the eastern high-rainfall zone), using internal transcribed sequence (ITS) metabarcoding. Ascomycota, Basidiomycota and Chytridiomycota consistently dominated the Namib Desert edaphic fungal communities and a core mycobiome composed of only 15 taxa, dominated by members of the class Dothideomycetes (Ascomycota), was identified. However, fungal community structures were significantly different in the fog, low-rainfall and high-rainfall zones. Furthermore, Namib Desert gravel plain fungal community assembly was driven by both deterministic and stochastic processes; the latter dominating in the all three xeric zones. We also present data that suggest that the inland limit of fog penetration represents an ecological barrier to fungal dispersal across the Namib Desert.

The Entomopathogenic Fungus Beauveria bassiana Employs Autophagy as a Persistence and Recovery Mechanism during Conidial Dormancy.

Many filamentous fungi develop a conidiation process as an essential mechanism for their dispersal and survival in natural ecosystems. However, the mechanisms underlying conidial persistence in environments are still not fully understood. Here, we report that autophagy is crucial for conidial lifespans (i.e., viability) and vitality (e.g., stress responses and virulence) in the filamentous mycopathogen Beauveria bassiana. Specifically, Atg11-mediated selective autophagy played an important, but not dominant, role in the total autophagic flux. Furthermore, the aspartyl aminopeptidase Ape4 was found to be involved in conidial vitality during dormancy. Notably, the vacuolar translocation of Ape4 was dependent on its physical interaction with autophagy-related protein 8 (Atg8) and associated with the autophagic role of Atg8, as determined through a truncation assay of a critical carboxyl-tripeptide. These observations revealed that autophagy acted as a subcellular mechanism for conidial recovery during dormancy in environments. In addition, a novel Atg8-dependent targeting route for vacuolar hydrolase was identified, which is essential for conidial exit from a long-term dormancy. These new insights improved our understanding of the roles of autophagy in the physiological ecology of filamentous fungi as well as the molecular mechanisms involved in selective autophagy. IMPORTANCE Conidial environmental persistence is essential for fungal dispersal in ecosystems while also serving as a determinant for the biocontrol efficacy of entomopathogenic fungi during integrated pest management. This study identified autophagy as a mechanism to safeguard conidial lifespans and vitality postmaturation. In this mechanism, the aspartyl aminopeptidase Ape4 translocates into vacuoles via its physical interaction with autophagy-related protein 8 (Atg8) and is involved in conidial vitality during survival. The study revealed that autophagy acted as a subcellular mechanism for maintaining conidial persistence during dormancy, while also documenting an Atg8-dependent targeting route for vacuolar hydrolase during conidial recovery from dormancy. Thus, these observations provided new insight into the roles of autophagy in the physiological ecology of filamentous fungi and documented novel molecular mechanisms involved in selective autophagy.

S7.3d Environmental surveillance of Aspergillus fumigatus in Dutch agricultural crops

S7.3 Emergent theories on pathogenic fungal dispersal around the globe, September 23, 2022, 10:30 AM - 12:00 PMObjectivesAzole-resistant Aspergillus fumigatus isolates from the environment hamper the treatment of patients suffering from Aspergillus diseases due to cross-resistance with agricultural azoles. Previous work has suggested A. fumigatus likely gains resistance through environmental azole exposure in so-called hotspots.MethodsWe investigated A. fumigatus resistance at multi-environmental sites including the compost, strawberry, and potatoes, where farmers used azole fungicides for crop protection.ResultsOn average 105 A. fumigatus CFU/g was recovered of which roughly half were itraconazole and tebuconazole resistant. Similar tandem repeat-mediated resistance mechanisms were found in colonies cultured from these environmental sites as reported in clinical azole-resistant isolates.ConclusionsOur results suggest that not only azole-containing plant-waste material but also other agricultural crops can be hotspots for resistance selection in A. fumigatus and underscores the need to further investigate transmission routes.

Bioturbation by echidna (

Bioturbation by digging animals is important for key forest ecosystem processes such as soil turnover, decomposition, nutrient cycling, water infiltration, seedling recruitment, and fungal dispersal. Despite their widespread geographic range, little is known about the role of the short-beaked echidna (Tachyglossus aculeatus) in forest ecosystems. We measured the density and size of echidna diggings in the Northern Jarrah Forest, south-western Australia, to quantify the contribution echidna make to soil turnover. We recorded an overall density of 298 echidna diggings per hectare, 21% of which were estimated to be less than 1 month old. The average size of digs was 50 ± 25 mm in depth and 160 ± 61 mm in length. After taking into account seasonal digging rates, we estimated that echidnas turn over 1.23 tonnes of soil ha−1 year−1 in this forest, representing an important role in ecosystem dynamics. Our work contributes to the growing body of evidence quantifying the role of these digging animals as critical ecosystem engineers. Given that the echidna is the only Australian digging mammal not severely impacted by population decline or range reduction, its functional contribution to health and resilience of forest ecosystems is increasingly important due to the functional loss of most Australian digging mammals.

Fungal Dispersal Across Spatial Scales

Fungi play key roles in ecosystems and human societies as decomposers, nutrient cyclers, mutualists, and pathogens. Estimates suggest that roughly 3–13 million fungal species exist worldwide, yet considerable knowledge gaps exist regarding the mechanisms and consequences, both ecological and social, of fungal dispersal from local to global scales. In this review, we summarize concepts underlying fungal dispersal, review recent research, and explore how fungi possess unique characteristics that can broaden our understanding of general dispersal ecology. We highlight emerging frontiers in fungal dispersal research that integrate technological advances with trait-based ecology, movement ecology, social–ecological systems, and work in unexplored environments. Outstanding research questions across these themes are presented to stimulate theoretical and empirical research in fungal dispersal ecology. Advances in fungal dispersal will improve our understanding of fungal community assembly and biogeography across a range of spatial scales, with implications for ecosystem functioning, global food security, and human health.

Wild herbivorous mammals (genus Neotoma) host a diverse but transient assemblage of fungi.

Fungi are often overlooked in microbiome research and, as a result, little is known about the mammalian mycobiome. Although frequently detected in vertebrate guts and known to contribute to digestion in some herbivores, whether these eukaryotes are a persistent part of the mammalian gut microbiome remains contentious. To address this question, we sampled fungi from wild woodrats (Neotoma spp.) collected from 25 populations across the southwestern United States. For each animal, we collected a fecal sample in the wild, and then re-sampled the same individual after a month in captivity on a controlled diet. We characterized and quantified fungi using three techniques: ITS metabarcoding, shotgun metagenomics and qPCR. Wild individuals contained diverse fungal assemblages dominated by plant pathogens, widespread molds, and coprophilous taxa primarily in Ascomycota and Mucoromycota. Fungal abundance, diversity and composition differed between individuals, and was primarily influenced by animal geographic origin. Fungal abundance and diversity significantly declined in captivity, indicating that most fungi in wild hosts came from diet and environmental exposure. While this suggests that these mammals lack a persistent gut mycobiome, natural fungal exposure may still impact fungal dispersal and animal health.

Changes in assembly processes of soil microbial communities in forest-to-cropland conversion in Changbai Mountains, northeastern China

In response to human-induced changes in the environment, it is crucial to assess the underlying factors of the impacts of forest conversion on ecosystem function. However, research is limited on bacteria and fungi diversity, functional properties, and community assembly mechanisms in response to forest-to-cropland conversion. We categorized soil bacterial and fungal communities from primary forest, secondary forest, and cropland in Changbai Mountains, China. We found that forest-to-cropland conversion altered the structure and composition of bacterial and fungal communities and might be associated with potential changes in function. The null models indicated that the conversion from forest to cropland enhanced the bacterial dispersal limitation process and weakened the fungal dispersal limitation processes. Furthermore, ecological drift dominates the ecological processes of cropland fungi. Both edaphic properties (the content of C: N ratio, available phosphorus, nitrate) significantly impacted on soil bacterial and fungal community structures. In addition, there were significant functional variations in the fungal community between forest-to-cropland. The ectomycorrhizal and saprotrophic fungi showed increased abundance in the forest microbial communities, whereas the endophytic and pathogenic fungal abundance was increased in cropland soil. Taken together, our data illustrate the differences in the response of bacteria and fungi to forest-to-cropland conversion in temperate forest areas and deepen our understanding of the effects of forest conversion on microbial functions and community assembly processes.

A general trait-based modelling framework for revealing patterns of airborne fungal dispersal threats to agriculture and native flora.

Fungal plant pathogens are of economic and ecological importance to global agriculture and natural ecosystems. Long-distance atmospheric dispersal of fungal spores (LAD) can pose threats to agricultural and native vegetation lands. An understanding of such patterns of fungal spore dispersal and invasion pathways can provide valuable insights into plant protection. Spore traits affect their dispersal abilities. We propose a general trait-based framework for modelling LAD to reveal dispersal patterns and pathways, and assess subsequent threats of arrival (TOA) quantitatively in the context of biosecurity. To illustrate the framework, we present a study of Australia and its surrounding land masses. The overall dispersal pattern covered almost the entire continent of Australia. Fungal spores in the size class of 10 and 20µm (aerodynamic diameter) posed the greatest TOA. Our study shows the effects of morphological traits on these potential TOA, and how they varied between source regions, size classes, and seasons. Our framework revealed spore dispersal patterns and pathways. It also facilitates comparisons of spatio-temporal dispersal dynamics among fungal classes, gaining insights into atmospheric long-distance dispersal of fungi as a whole, and provides a basis for assessing fungal pest threats in potential source regions based on easily measured spore characteristics.

Plant neighbours shape fungal assemblages associated with plant roots: A new understanding of niche‐partitioning in plant communities

Abstract Understanding the assembly rules of mycorrhizal fungi is crucial, given their tremendous importance in plant nutrition and health. Differentiation in plant‐associated arbuscular mycorrhizal fungi (AMF) is likely driven by a host‐preference effect. Coexisting plant species may then affect a focal plant microbiota through fungal dispersal among plants, and plant preferential recruitment of AMF. Both mechanisms are likely shaped by the plant's phylogenetic and functional strategies. We expected that (a) the structure of AMF assemblages associated with a focal plant depends on the identity of the neighbouring plant species; (b) this effect would be predicted by the phylogenetic and functional similarity between the focal and neighbouring plant species. These predictions were tested during the first stages of growth, by simulating the early development of plants within a community Using an experimental matrix‐focal plant species design testing 15 neighbouring plants from five taxonomic families, we demonstrated that the neighbouring plants provided different species pools for the focal plant, Medicago truncatula, and influenced AMF communities associated with focal plant, especially in terms of richness but not relative evenness. Medicago truncatula grown with Brassicaceae or other Poaceae species displayed respectively no or low AMF richness compared to those grown with Rosaceae and Asteraceae species. These effects were weakly dependent on the phylogenetic distance from the neighbouring plant but were predicted by the functional proximity. AMF assemblages were enriched and bore more resemblance to the neighbouring plants when the neighbouring plants were functionally dissimilar from the focal one. Functional dissimilarity was only a significant predictor when based on traits characterizing the nutrient use and uptake strategy rather than on a more integrated growing strategy of the plant. Microbiota composition was shown to be dependent on the identity of the neighbouring plant, particularly on its functional below‐ground niche. At the colonization stage, when the plant arrives in a community, plant mycobiota might be influenced by the spatial distribution of plants already present in the community. This work suggests a new view of the concept of niche partitioning in space for plants based on microorganism–plant interactions. A free Plain Language Summary can be found within the Supporting Information of this article.

Dispersión y transporte de propágulos micorrícicos en el bosque seco tropical

Los animales son un factor importante en la dispersión de propágulos de los hongos formadores de micorrizas en los ecosistemas de bosque seco tropical. En la presente revisión bibliográfica, se hace énfasis en las diferentes formas de dispersión que pueden realizar los animales por medio de la ingesta o adherencia a estructuras externas para dispersar los propágulos de micorrizas tanto horizontal como verticalmente. La mayoría de las publicaciones provienen de estudios realizados en diversos ecosistemas (tundra, selva, sabanas y praderas), sin embargo, en esta revisión se puso especial énfasis en los estudios que reportan aquellos grupos de organismos que se encuentran en el ecosistema de bosque seco tropical. En el caso de los invertebrados, se evidencia el potencial de dispersión de los hongos micorrícicos en los diferentes estadios de desarrollo de los animales, así como por su movilidad en actividades realizadas para su alimentación y construcción de madrigueras. La dispersión efectiva de hongos micorrícicos se efectúa especialmente por medio de colémbolos, ácaros, lombrices de tierra, nemátodos, hormigas, isópodos, diplópodos, crustáceos, dípteros, avispas, escarabajos y saltamontes. La dispersión fúngica también puede verse favorecida por diferentes grupos de vertebrados, como los mamíferos, aves, reptiles y anfibios. Destacándose principalmente los roedores y las aves, quienes dispersan hongos micorrícicos a largas distancias por el consumo de propágulos adheridos a sus alimentos y estructuras externas. La literatura evidencia la importancia de la fauna en la dispersión de hongos micorrícicos en los ecosistemas de bosque seco. La presente revisión promueve la disminución de las brechas de conocimientos en torno a la dispersión de estructuras fúngicas, dinámicas especializadas y funcionamiento espacial del ecosistema.

Ecology: Fungal Mimics Dupe Animals by Transforming Plants

Many fungi transform host tissues to benefit their own reproduction. A recent study investigates a fungus that converts its plant host's reproductive tissues into ornate flower mimics. These 'pseudoflowers' present complex cues that may enlist insects to facilitate fungal dispersal.

Dissemination of Isaria fumosorosea Spores by Steinernema feltiae and Heterorhabditis bacteriophora.

Entomopathogenic nematodes and fungi are globally distributed soil organisms that are frequently used as bioagents in biological control and integrated pest management. Many studies have demonstrated that the combination of biocontrol agents can increase their efficacy against target hosts. In our study, we focused on another potential benefit of the synergy of two species of nematodes, Steinernema feltiae and Heterorhabditis bacteriophora, and the fungus Isaria fumosorosea. According to our hypothesis, these nematodes may be able to disseminate this fungus into the environment. To test this hypothesis, we studied fungal dispersal by the nematodes in different arenas, including potato dextrose agar (PDA) plates, sand heaps, sand barriers, and glass tubes filled with soil. The results of our study showed, for the first time, that the spreading of both conidia and blastospores of I. fumosorosea is significantly enhanced by the presence of entomopathogenic nematodes, but the efficacy of dissemination is negatively influenced by the heterogeneity of the testing arena. We also found that H. bacteriophora spread fungi more effectively than S. feltiae. This phenomenon could be explained by the differences in the presence and persistence of second-stage cuticles or by different foraging behavior. Finally, we observed that blastospores are disseminated more effectively than conidia, which might be due to the different adherence of these spores (conidia are hydrophobic, while blastospores are hydrophilic). The obtained results showed that entomopathogenic nematodes (EPNs) can enhance the efficiency of fungal dispersal.

DNA metabarcoding of fungal diversity in air and snow of Livingston Island, South Shetland Islands, Antarctica

We assessed fungal diversity present in air and freshly deposited snow samples obtained from Livingston Island, Antarctica, using DNA metabarcoding through high throughput sequencing (HTS). A total of 740 m3 of air were pumped through a 0.22 µm membrane. Snow obtained shortly after deposition was kept at room temperature and yielded 3.760 L of water, which was filtered using Sterivex membranes of 0.22 µm mesh size. The total DNA present was extracted and sequenced. We detected 171 fungal amplicon sequence variants (ASVs), 70 from the air and 142 from the snow. They were dominated by the phyla Ascomycota, Basidiomycota, Mortierellomycota and Mucoromycota. Pseudogymnoascus, Cladosporium, Mortierella and Penicillium sp. were the most dominant ASVs detected in the air in rank order. In snow, Cladosporium, Pseudogymnoascus, Penicillium, Meyerozyma, Lecidea, Malassezia, Hanseniaspora, Austroplaca, Mortierella, Rhodotorula, Penicillium, Thelebolus, Aspergillus, Poaceicola, Glarea and Lecanora were the dominant ASVs present. In general, the two fungal assemblages displayed high diversity, richness, and dominance indices, with the assemblage found in snow having the highest diversity indices. Of the total fungal ASVs detected, 29 were only present in the air sample and 101 in the snow sample, with only 41 present in both samples; however, when only the dominant taxa from both samples were compared none occurred only in the air and, among the rare portion, 26 taxa occurred in both air and snow. Application of HTS revealed the presence of a more diverse fungal community in the air and snow of Livingston Island in comparison with studies using traditional isolation methods. The assemblages were dominated by cold-adapted and cosmopolitan fungal taxa, including members of the genera Pseudogymnoascus, Malassezia and Rhodotorula, which include some taxa reported as opportunistic. Our results support the hypothesis that the presence of microbiota in the airspora indicates the possibility of dispersal around Antarctica in the air column. However, further aeromycology studies are required to understand the dynamics of fungal dispersal within and beyond Antarctica.

Investigating the impact of the mycorrhizal inoculum on the resident fungal community and on plant growth

In the last few decades, microbial inoculants have been used as organic fertilizers worldwide. Among the most widely used commercial products are arbuscular mycorrhizal (AM) fungi, as these fungi can associate with a variety of crops. Despite the potential benefits for soil quality and crop yield associated with AM fungal colonization, experiments assessing the persistence of the fungi in the field have yielded inconsistent results. Additionally, it is not yet clear whether or not the introduction of commercial inoculants could lead to changes to the resident fungal community, and eventually to invasion of the commercial products with a possible displacement of resident species. Here we use a partial differential equation model to assess the potential biodiversity risks and productivity benefits deriving from inoculation. We study the impact of AM fungal inoculation on the resident fungal community and on plant growth at a landscape scale. We determine how inoculant persistence and spread are affected by its competition with resident fungal species, by its mutualist quality, and by fungal dispersal. Our findings suggest that the increase in fungal abundance due to inoculation always leads to a short-term increase in host productivity, regardless of inoculant identity. However, the use of strongly competing inoculants constitutes a biodiversity risk, and may result in the invasion of low quality mutualists.

Dispersal of Arbuscular Mycorrhizal Fungi: Evidence and Insights for Ecological Studies.

Dispersal is a critical ecological process that modulates gene flow and contributes to the maintenance of genetic and taxonomic diversity within ecosystems. Despite an increasing global understanding of the arbuscular mycorrhizal (AM) fungal diversity, distribution and prevalence in different biomes, we have largely ignored the main dispersal mechanisms of these organisms. To provide a geographical and scientific overview of the available data, we systematically searched for the direct evidence on the AM fungal dispersal agents (abiotic and biotic) and different propagule types (i.e. spores, extraradical hyphae or colonized root fragments). We show that the available data (37 articles) on AM fungal dispersal originates mostly from North America, from temperate ecosystems, from biotic dispersal agents (small mammals) and AM fungal spores as propagule type. Much lesser evidence exists from South American, Asian and African tropical systems and other dispersers such as large-bodied birds and mammals and non-spore propagule types. We did not find strong evidence that spore size varies across dispersal agents, but wind and large animals seem to be more efficient dispersers. However, the data is still too scarce to draw firm conclusions from this finding. We further discuss and propose critical research questions and potential approaches to advance the understanding of the ecology of AM fungi dispersal.

Double lives: transfer of fungal endophytes from leaves to woody substrates.

Fungal endophytes are a ubiquitous feature of plants, yet for many fungi the benefits of endophytism are still unknown. The Foraging Ascomycete (FA) hypothesis proposes that saprotrophic fungi can utilize leaves both as dispersal vehicles and as resource havens during times of scarcity. The presence of saprotrophs in leaf endophyte communities has been previously observed but their ability to transfer to non-foliar saprobic substrates has not been well investigated. To assess this ability, we conducted a culture study by placing surface-sterilized leaves from a single tropical angiosperm tree (Nectandra lineatifolia) directly onto sterile wood fragments and incubating them for 6 weeks. Fungi from the wood were subsequently isolated in culture and identified to the genus level by ITS sequences or morphology. Four-hundred and seventy-seven fungal isolates comprising 24 taxa were cultured from the wood. Of these, 70.8% of taxa (82.3% of isolates) belong to saprotrophic genera according to the FUNGuild database. Furthermore, 27% of OTUs (6% of isolates) were basidiomycetes, an unusually high proportion compared to typical endophyte communities. Xylaria flabelliformis, although absent in our original isolations, formed anamorphic fruiting structures on the woody substrates. We introduce the term viaphyte (literally, “by way of plant”) to refer to fungi that undergo an interim stage as leaf endophytes and, after leaf senescence, colonize other woody substrates via hyphal growth. Our results support the FA hypothesis and suggest that viaphytism may play a significant role in fungal dispersal.

An agent-based model of the foraging ascomycete hypothesis

Abstract Most trees host hundreds of species of fungi asymptomatically in their internal tissues, known collectively as fungal endophytes. The Foraging Ascomycete (FA) hypothesis proposed that some fungal endophytes inhabit the internal leaf tissue of forest trees in order to enhance dispersal to substrates on the forest floor, by using leaves as vectors and as refugia during periods of environmental stress. This dispersal strategy has recently been termed viaphytism and is now thought to apply to fungal groups beyond ascomycetes. Viaphytism implies that many fungi may be in continuous and cyclical flux between life stages as endophytes in the forest canopy and as wood-decomposing fungi on the forest floor. This cycle may represent a very common and previously-ignored process in the ecology of forests, with implications for forest health. The ecological consequences of the viaphyte lifestyle are complex, so we constructed an agent-based model to explore it. Our model is intended to serve as both an explicit conceptual explanation of viaphytism, and as an exploration of the conditions in which a strategy of endophytism accompanied by leaf dispersal may be advantageous for fungi. In a scenario of a viaphytic fungal species on a model forest landscape, without fungal competitors, viaphytism is predicted to be a plausible alternative to dispersal to substrates by spores alone, allowing the fungus to persist reliably in the landscape. In a scenario that allows competition from aggressively dispersed non-viaphytic fungi, the model predicts some competitive benefits to fungal dispersal via leaves. However, these benefits are conditional, requiring sufficient retention through time of endophyte infections by host trees, and sufficient host trees in the landscape. In the model, loss of these fungal populations can result from increased local disturbances of forest canopy, and deforestation.