The present study explores the effects of FMS functional movement training on aerobic athletes' body posture coordination, and explores the application of FMS functional movement training to the promotion of aerobic athletes' physical performance. In aerobic exercise, body posture control ability is an important criterion for the expression of technical movements, the display of form art aesthetics, and the evaluation of aerobic competition performance. Physical training is the most basic way to improve body posture control, and FMS functional movement training is an emerging physical training mode in recent years, which attaches more importance to functional training than traditional physical training, does not improve athletes' self-confidence in a purposeful way, and has a relatively good improvement effect on technical movements with relatively high movement requirements.40 college aerobic athletes were randomly divided into two groups: Traditional physical training Group (T, N=20) and FMS functional movement training Group (F, N=20). The control group adopts the traditional physical training method, and the functional training group adopts the training method based on the functional movement design of FMS. The results showed that compared with before training, after the traditional physical training group and the FMS functional movement training group intervened, the subjects' FMS test improved significantly in all six motility movements (P<0.05), but there was no significant difference in the straight bow squat and active orthogonal lifting test (P>0.05). The body posture coordination in the dynamic movement and static movement of aerobics was significantly improved only in the FMS functional movement training group (P<0.05).Conclusion: FMS functional training can relatively well promote aerobic athletes' body control ability and body posture coordination in the movement process, which is suitable for further application and dissemination in the physical fitness training of college aerobic athletes.After 12 weeks of training, the scores of various indicators of the experimental group were significantly higher than those of the control group before the experiment, and the results of the FMS test were significantly improved; the effect of the experimental group was better than that of the control group, reducing the incidence of exercise damage; the physical stability, flexibility and asymmetry of the experimental group athletes were improved, but the effect on active right angle rise and straight lunge squat was not obvious. In the body posture control ability test under the static movement plane change condition, the 8-step ventral bridge, 5-step lateral bridge and hexagonal bridge of the experimental group and the control group showed significant differences, and the experimental configuration results were better than the control group, and the before-and-after comparison of the experimental group was significant.It shows that FMS functional movement training can improve the body posture control ability of aerobic athletes in the static movement plane. In the test of aerobic athletes' body posture control ability under the condition of dynamic movement direction change, the results show that the improvement effect of the T-shaped, W-shaped and Y-shaped tests of aerobic combination steps of the experimental group before and after the experiment is better than that of the control group, and each indicator has a significant difference within the group, indicating that FMS functional movement training has improved the body posture control ability of aerobic athletes.