AbstractThirteen ostracod species including two new species, Clavofabellina fukujiensis n. sp. and Bythocypris wangi n. sp., are reported from the Middle Shale Member of the Fukuji Formation, Devonian of central Japan. The ostracods demonstrate species‐links with South China, indicating that the Hida‐Gaien Terrane of central Japan shared biogeographical affinities with the shallow marine faunas of the South China paleocontinent during the Early Devonian.