Anastrepha fraterculus (Wiedemann) (Diptera: Tephritidae) is one of the principal quarantine pests in Colombian fruit production. Studies have shown that the nominal species is a complex of cryptic species and that the more common biological entity that exists in Colombia, the “Andean morphotype,” is a species, different from others on the continent. The bioecological information available for this morphotype is scarce, yet it is essential for establishing integrated pest management programs and for defining the insect's quarantine status. Knowledge of the pest's population structure, whether biological, genetic or morphological, is a valuable tool in making management decisions. The goal of this study was to gain information on the phenotypic structure of the Colombian populations of this species complex through the morphometric study of the eggs, larvae, and adults. Populations of A. fraterculus s.l. from 2 fruit species widely known as hosts for this insect (coffee, Coffea arabica L. [Rubiaceae], at medium altitudes; feijoa, Acca sellowiana (O. Berg) [Myrtaceae]) at high altitudes) were collected at 9 Colombian localities from the south of the country (Narino) to the northeast (Santander). Adults were obtained from the collected fruits, which were then used to rear insects in feijoa fruits. Significant variables were selected using a discriminant analysis, and the differences between the populations were analyzed using a multivariate analysis of variance. The variability of each significant variable was studied with a Kruskal-Wallis nonparametric analysis. The morphological variables studied were 21 for adult females, 7 for adult males, 24 for third-instar larvae, and 2 for the eggs. Intraspecific variability was found in the Colombian populations of the A. fraterculus Andean morphotype. In populations from higher altitudes, the adults and larvae are larger, whereas the eggs are smaller, compared to populations from lower altitudes. Variability might have a genetic component and be due to the limited movement of the individuals, which may favor the application of management activities in selected areas.
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