Fracture stratigraphy study for a subsurface sedimentary rock sequence can be a challenging and demanding task. Typically, the data obtained from seismic and well-logs are heavily impacted by resolution issues and are difficult to interconnect. In this work, we document and extract fracture properties (orientation, density, intensity, etc.) from a layered carbonate sequence for fracture stratigraphy characterization. High-resolution subsurface Ground Penetrating Radar (GPR) data images, coupled with drone and previously documented well-log profiles, were analyzed to achieve the structural characterization task. The studied outcrop is localized in the Potiguar Basin (Brazil), where the Cretaceous Jandaíra Formation carbonates are exposed for hundreds of meters. The sequence is subdivided into an upper packstone/grainstone portion and a lower wackestone bed package. We documented the higher fracture intensity/density in the lower bed package portion, highlighting that depositional texture and intra-bed stylolites control the higher fracture distribution in the sequence. Finally, a 3D conceptual model describing the overall results is presented. This model summarizes and shows the innovative fracture stratigraphy method based on the GPR data analysis.