Fossil Rodent Research Articles

Atypical holocene ctenomyid rodent burrows related to eolian dune deposits from central Argentina

This contribution aims to interpret the producers and the paleoenvironmental context of Holocene rodent burrows (and associated ichnofossils) from the Late Pleistocene-Holocene Meaucó Formation, central La Pampa Province, Argentina. Fieldwork included a detailed sedimentary logging, a ground penetrating radar survey and documentation of the fossil burrow systems. The Meaucó Formation rest on erosive unconformity over the Upper Miocene-Lower Pliocene Cerro Azul Formation and display a vertical change from eolian dunes that become sparser up section (as imaged by ground penetrating radar) and were capped by a paleosol. The paleosol is covered by recent eolian dune and interdune deposits. The fossil rodent burrows occur up to 1.7 m below the paleosol and share several morphologic features with modern Ctenomyidae burrows, except the high slope of entrance and internal ramps, and the maximum depth of burrows. To explain these differences, it is proposed that the burrows were excavated by ctenomyids in ancient sloping surfaces of eolian dunes, which resulted in increased inclination and apparent maximum depth of the systems. This is an example of influence of environmental conditions on the architecture of rodent burrows, and can be of help when interpreting other similar fossil examples. The paleosol community associated with the fossil vertebrate burrows also included other organisms recorded by their trace fossils: horses (Hippipeda isp.), a scrubby vegetation (rhizoliths), coleoptera or spiders (Skolithos linearis), cicada nymphs (Feoichnus challa) and ants (Daimoniobarax isp.).

Reconstruction of the Environmental Conditions of the Ob and Irtysh Regions on the Basis of the Rodent Fossil Fauna

Reconstruction of the Environmental Conditions of the Ob and Irtysh Regions on the Basis of the Rodent Fossil Fauna

Reconstruction of the Environmental Conditions of the Ob and Irtysh Regions on the Basis of the Rodent Fossil Fauna

The paper compares different approaches to the reconstruction of environmental conditions from rodent fossil complexes, namely, the bioclimatic method and the method of reconstructing soil and plant conditions considering voles. For the reconstruction, data from ten localities in Western Siberia dated to the second half of the Middle Pleistocene were analyzed. The bioclimatic method allowed us to reconstruct the arid climatic zone in the south of Western Siberia (the Pre-Altai Plain and the Middle Irtysh) and the moderately cold and arctic climate for the localities situated northwards. The method of reconstruction of soil and vegetation conditions showed the predominance of xerophytic plant communities for the southern localities and mesophytic, mesohygrophytic, and hygrophytic for the northern ones. As additional indicators of environmental conditions, specialized species were proposed: subterranean animals (Siberian zokor and northern mole voles) and briophages (West Siberian lemming).

Precipitation variability, vegetation turnover, and anthropogenic disturbance over the last millennium in the Atacama highlands of northern Chile (19°S)

The Late-Holocene history of hydroclimatic variability in the Atacama Desert offers insights into the effects of precipitation and humans on ecosystems in one of the most extremely arid regions of the world. However, understanding the effects of regional precipitation variability in relation to local ecological stressors remains to be fully resolved. Here, we present a pollen-based qualitative precipitation reconstruction derived from fossil rodent middens recovered from two sites near Laguna Roja (LRO; n = 25) and Isluga (ISL; n = 15) in the Atacama highlands (19°S) of northern Chile. At LRO, the fossil pollen record shows multi-centennial hydroclimatic anomalies during the last millennium, with wetter than present phases at 1155–1130, 865–670, and 215–80 cal yrs BP, and similar to present conditions between 1005 and 880 cal yrs BP. In contrast, the ISL record shows a wet phase during 1115–840 cal yrs BP, suggesting that meso-ecological processes were as important in vegetation turnover as regional hydroclimate anomalies. Wetter conditions derived from LRO partially overlap with the Medieval Climate Anomaly (865–670 cal yrs BP) and with the latest part of the Little Ice Age (215–80 cal yrs BP). Furthermore, no strong anthropogenic signal was identified possibly related to the remote location of the records. Palynological diversity analyses evidence increasing diversification of plant communities during wet events at both sites. In correlation to existing regional hydroclimatic records from the Western Andes, our precipitation reconstruction verifies that centennial-scale changes in the strength of the South American Summer Monsoon (SASM) and partial influence of El Niño-like (ENSO) conditions drove vegetation turnover in the Atacama Desert during the last millennium.

First virtual endocast description of an early Miocene representative of Pan-Octodontoidea (Caviomorpha, Hystricognathi) and considerations on the early encephalic evolution in South American rodents

AbstractThe study of the cranial endocast provides valuable information to understand the behavior of an organism because it coordinates sensory information and motor functions. In this work, we describe for the first time the anatomy of the encephalon of an early Miocene pan-octodontoid caviomorph rodent (Prospaniomys priscus Ameghino, 1902) found in the Argentinean Patagonia, based on a virtual 3D endocast. This fossil rodent has an endocast morphology here considered ancestral for Pan-Octodontoidea and other South American caviomorph lineages, i.e., an encephalon with anteroposteriorly aligned elements, mesencephalon dorsally exposed, well-developed vermis of the cerebellum, and rhombic cerebral hemispheres with well-developed temporal lobes. Prospaniomys Ameghino, 1902 also has relatively small olfactory bulbs, large paraflocculi of the cerebellum, and low endocranial volume and degree of neocorticalization. Its encephalization quotient is low compared with Paleogene North American and European noncaviomorph rodents, but slightly higher than in several late early and late Miocene caviomorphs. Paleoneurological anatomical information supports the hypothesis that Prospaniomys was a generalist caviomorph rodent with terrestrial habits and enhanced low-frequency auditory specializations. The scarce paleoneurological information indicates that several endocast characters in caviomorph rodents could change with ecological pressures. This work sheds light on the anatomy and evolution of several paleoneurological aspects of this particular group of South American rodents.

New rodents shed light on the age and ecology of late Miocene ape locality of Tapar (Gujarat, India)

The Miocene ape (Sivapithecus) locality of Tapar in Kutch (Gujarat, India) has yielded a diverse rodent assemblage that includes: a new murine Progonomys prasadi sp. nov., a new gerbilline Myocricetodon gujaratensis sp. nov., a new rhizomyne Kanisamys kutchensis sp. nov. and a new sciurine Tamias gilaharee sp. nov., beside additional remains of Progonomys morganae, Dakkamys asiaticus, Prokanisamys sp., Sayimys sivalensis and Democricetodon fejfari. Morphometric and PAUP based phylogenetic analyses place Progonomys prasadi sp. nov. within the Progonomys lineage. The cladogram obtained for the Siwalik murines suggest that Progonomys was ancestral to all the modern and one extinct murine genera recovered from the Siwaliks. The advanced features of Myocricetodon gujaratensis sp. nov. indicate that it was an immigrant to the subcontinent in the late Miocene. The cladistic analysis performed on Kanisamys kutchensis sp. nov. shows that it shared several advanced characters with contemporaneous Kanisamys nagrii and Kanisamys sivalensis. Based on the biostratigraphical ranges of Siwalik rodents and the co-occurrence of advanced forms of new and already reported murines, a new gerbilline and a new sciurine, we propose an age of ∼10 Ma to the primate-bearing Tapar locality. Already reported stable isotope data on murines, and ecological preferences of modern counterparts of the fossil rodents and associated sharks and rays from Tapar locality, indicate that the Miocene ape Sivapithecus may have lived in a subtropical monsoonal forest close to the coast, very different from the present day arid conditions. http://zoobank.org/urn:lsid:zoobank.org:pub:12CE1B44-22A0-450F-9588-6C7F25242771

The oldest semi-aquatic beaver in the world and a new hypothesis for the evolution of locomotion in Castoridae.

The North American rodent fossil record includes hundreds of species representing both an incredible taxonomic diversity and great ecological disparity. Although it is during the Oligocene that taxonomic diversity first peaks, it is not until the Miocene, almost 10 Myr later, that many ecologies, particularly locomotory ecologies, are recorded. Here, I present a new Oligocene-aged species of beaver from Montana, Microtheriomys articulaquaticus sp. nov., which represents the oldest semi-aquatic rodent in North America and the oldest amphibious beaver in the world, pushing the advent of semi-aquatic ecology in beavers by 7 Myr. I also provide morphological data supporting a terrestrial ecology for the sister taxon to Castoridae. Together with existing data, these findings lead to a new hypothesis for the evolutionary ecology of castorids whereby swimming was exapted from burrowing during the Oligocene. This evolution of semi-aquatic locomotion may have taken place in North America instead of Eurasia. It started in small beavers with gigantism achieved only much later. Indeed, body size evolution in castoroids follows a directional drift. Beavers obey Cope's rule, a selection for larger size over time that appears associated with semi-aquatic ecology and may well explain their low modern diversity.

Incisor enamel microstructure places New and Old World Eomyidae outside Geomorpha (Rodentia, Mammalia)

AbstractThe lower incisor enamel microstructure of the fossil rodent family Eomyidae was believed to be three‐layered and highly derived but rather uniform throughout the clade. Here, we describe a new four‐layered schmelzmuster in Eomyidae consisting of a three‐fold portio interna with longitudinal oriented, uniserial Hunter‐Schreger bands and a one‐fold portio externa, accounting for a unique enamel microstructure character combination in Rodentia. This new schmelzmuster type has developed early in eomyid evolution and is detectable already in the late Eocene (Chadronian) of North America. In European eomyids, it first occurs in the early Miocene (MN 3), implying that this four‐layered schmelzmuster was not present in all members of the family but restricted to species included in Eomyini and some genera currently considered Eomyidae incertae sedis within Eomyidae. Additionally, our analysis recognizes three taxa with schmelzmuster divergent from all other eomyids. Incisor enamel microstructure does not advocate a close phylogenetic relationship of Eomyidae to either fossil or extant Heteromyidae and Geomyidae, nor to fossil Heliscomyidae and Florentiamyidae. Our results rather support the view that Eomyidae are placed outside Geomorpha.

Did Modern Precipitation Drivers Influence Centennial Trends in the Highlands of the Atacama Desert During the Most Recent Millennium?

AbstractAlthough present‐day precipitation variability in the southern Altiplano and adjacent Andean margins (15–25°S) is well understood, past drivers and mechanisms remain little‐explored. We analyzed the pollen assemblages of 31 fossil rodent middens to reconstruct precipitation change during the most recent millennium in the highlands of the Atacama Desert (22°S), on the western foothills of the Altiplano. Variations in low and high elevation pollen types reveal reduced (increased) precipitation between 930 and 550 BP (510 and 440 BP) (BP = before present; taken as Common Era 1950). Variable pollen assemblages prevailed from 390 to 90 BP, followed by a drying trend that persists until present times. Similarities with proxy records from the Altiplano, the tropical Andes and the equatorial Pacific suggest that centennial‐scale wet/dry phases in the Atacama highlands were associated with changes in the strength of the South American monsoon system, most likely influenced by changes akin to modern El Niño Southern Oscillation variability.

Ecological correlates of the morphology of the auditory bulla in rodents: Application to the fossil record.

For rodents, hearing is essential to survival. It enables predator evasion, prey detection, and conspecific recognition; it is also likely to be constrained by the physical environment. The resulting hypothetical link between tympanic bulla morphology and ecology has never been investigated across a broad array of rodent species before. Such link may enable the determination of the ecological affinities of many fossil species only known from partial skulls. In this study, we used geometric morphometrics to quantify the shape of the auditory bulla of 197specimens representing 91species from 17 families of extant rodents across four different locomotory modes. We used landmarks and semi-landmarks on the ventral and lateral views of the skull to capture morphological characteristics of the bulla and external auditory meatus (EAM). Our results demonstrate an association between bullar morphology and locomotion in rodents. Bullar shape enables the correct classification of 76% of the species in our training set. Fossorial taxa, in particular, show a characteristic morphology including an asymmetric bulla with a dorsally located and laterally expanded EAM that has a small opening diameter. A phylogenetically informed flexible discriminant analysis shows a weak phylogenetic effect on tympanic morphology. There is no evidence for differences in bullar hypertrophy across locomotory categories. The application of this approach to select fossil rodents from the Oligo-Miocene shows broad agreements with prior studies and yields new locomotory inferences for 14 fossil species, including the first proposed locomotion for members of the family Florentiamyidae. Such results call for the timing of burrowing diversification in rodents to be reevaluated.

Fossil rodents in Mylodon Cave as indicators of late Pleistocene–Holocene environmental evolution in southern Chile

AbstractWe conducted the first taphonomic and paleoenvironmental study based on late Pleistocene–Holocene small mammal remains recovered from the famous Mylodon Cave (Cerro Benítez area, Última Esperanza, Chile). Most of the analyzed material came from the extensive excavations made by Earl Saxon in 1976. We also studied late Holocene small mammal samples of the neighboring rock shelter Dos Herraduras 1. Analyzed remains were mostly produced by owls, probably living inside the caves. In Mylodon Cave, the higher values of girdle bones are consistent with a windblown litter. We recorded nine species of rodents, seven cricetids, and two caviomorphs; almost all the identified taxa integrate recent local communities. Late Pleistocene–Holocene assemblages are characterized by the chinchilla ratEuneomys, indicating unforested areas around the caves under cold and moist climatic conditions. Middle Holocene amelioration is reflected by incremental rodent species richness, including the first record of taxa clearly associated with forest (e.g.,Abrothrix lanosa). Late Holocene assemblages are markedly stable, indicating local conditions similar to the current (historical) environment. Quaternary rodents from Cerro Benítez area do not indicate abrupt environmental changes during middle–late Holocene, but a progressive trend towards forest increase.

Socio-environmental dynamics in the central Atacama desert (22°S) during the late Holocene

In the Central Atacama Desert (22°-24°S; henceforth CAD), around 3700 cal yrs BP, human economies begin to transition from relying mostly on hunting and gathering to increasingly incorporating horticulture and pastoralism became more intensive during the Late Intermediate Period (LIP; beginning at ca. 1050 cal yrs BP/900 AD). In this extreme environment, the well-being of past and present farming and herding communities is directly tied to water availability. The lack of proper paleoclimatic/environmental records in terms of their temporal/spatial resolution impeded evaluation whether sedentarization was synchronous, in some degree, with the amelioration of dry conditions recorded during the Late Holocene at millennial timescales. The present paper thus aims (1) to reconstruct the past environmental and climatic dynamics in the CAD (22°S) during the late Holocene at millennial to sub-centennial scales based on the pollen record of fossil rodent middens of Cuesta Chita site and; (2) to discuss their possible relationship to changes in cultivation and water management as seen at the archaeological sites of Topaín, Paniri and Turi, located in the Salado River basin. The CCH rodent midden pollen record reflects wetter (drier) than present phases around 4400, 3650, 3000, 2200–2100, 1600, 855–840, 520–450 and 100 cal yrs BP (980, 450-115 cal yrs BP). By the time that wetter-than-present conditions occurred in the CAD (Formative Period, 3500-1050 cal yrs BP), local communities had already developed small-scale horticultural practices, yet they did not develop extensive or intensive agricultural practices. Indeed, historical processes leading to economic transformations and the rapid adoption of intensive agriculture throughout the CAD after 1000 cal yrs BP occurred and were probably favored by wetter than present conditions, suggesting positive correlations between climatic and cultural change. However, these correlations are complex and non-deterministic. In fact, decreased moisture between 650 and 600 cal yrs BP in the Turi Basin was met by agropastoralists at Topaín with complex local strategies that included changing water management practices and significantly extending farmed lands. Similarly, the Topaín fields were abandoned during a period of much-wetter-than-present conditions. The chronologically fine-grained comparison of the CCH and archaeological records reveals that the relationship between climate and culture is complex, non-deterministic, and historically contingent, with examples of agricultural expansion during a time of water stress, and the abandonment of fields during a time of abundance.

Paleolithic Rodent fossils and Paleoenvironment : from Maedun cave site in Jeongseon, Korea

Paleolithic Rodent fossils and Paleoenvironment : from Maedun cave site in Jeongseon, Korea

Tempo and Mode: Evidence on a Protracted Split From a Dense Fossil Record

Fossil records generally inform paleobiologists about extinct taxa and rates of evolution measured at the scale of millions of years. Good records that are densely sampled through time can reveal species level details such as longevity in local sections. Yet fossil data normally do not address details of lineage microevolution because the density through time of lineage sampling is insufficient to perceive patterns at a precision finer than 106 years in most cases. This study concerns details of a splitting event in the evolution of murine rodents, an event for which multiple fossil samples dated to a precision of 105 years fortuitously document the tempo and mode of origin of sister species, the stems of two extant tribes of mice. Evolution of early Murinae in the northern part of the biogeographically restricted Indian subcontinent between 11.6 and 10.5 Ma involved cladogenesis of two crown taxa, the extant tribes Murini and Arvicanthini. Large samples of fossil rodent teeth document their divergence from a common morphological pool. Definitive basal Murini and Arvicanthini at 10.5 Ma are similar in size and differ by subtle features of the dentition. Those features occur sporadically in the common pool of older fossil teeth at 11.2, 11.4, and 11.6 Ma as inconsistent polymorphisms. Interpreted as a single lineage in the 11.6–11.2 Ma interval, variability of this abundant murine incorporated the roots of the two crown tribes. The pattern through time suggests morphological stasis for several hundred thousand years prior to splitting. This special case informs us on one example of evolution and shows that the tempo of splitting evolution in some cases may be measured in hundreds of thousands of years, followed by stasis once daughter species have differentiated morphologically.

Late Quaternary Voles from Persistence Cave, Black Hills, South Dakota

Excavations at Persistence Cave (Black Hills, SD), produced a large sample of Quaternary microfauna including a diverse assemblage of arvicoline rodents. Identifiable lower first molars (n = 367) include specimens referred to heather vole (Phenacomys sp.), muskrat (Ondatra sp.), southern bog lemming (Synaptomys cooperi), red-backed vole (Myodes sp.), sagebrush vole (Lemmiscus curtatus), prairie vole (Microtus ochrogaster), and a form of meadow vole (Microtus sp.). Direct radiocarbon dating of specimens of Lemmiscus curtatus is consistent with previous records from the Nelson–Wittenberg Site and indicates that sagebrush voles inhabited the southern Black Hills roughly 40,000 yr BP. Direct ages for Myodes sp. and Microtus ochrogaster taxa are consistent with previously published data from Don's Gooseberry Pit, supporting previous interpretations of faunal turnover in the late Pleistocene/early Holocene. Collectively, the radiocarbon record suggests that deposition of fossils of arvicoline rodents at Persistence Cave occurred over a restricted period of time beginning approximately 40,000 yr BP. This period of deposition was followed by a depositional hiatus that included the Last Glacial Maximum, and deposition was reinitiated near the terminal Pleistocene.

Evolution of arboreality and fossoriality in squirrels and aplodontid rodents: Insights from the semicircular canals of fossil rodents.

Reconstructing locomotor behaviour for fossil animals is typically done with postcranial elements. However, for species only known from cranial material, locomotor behaviour is difficult to reconstruct. The semicircular canals (SCCs) in the inner ear provide insight into an animal's locomotor agility. A relationship exists between the size of the SCCs relative to body mass and the jerkiness of an animal's locomotion. Additionally, studies have also demonstrated a relationship between SCC orthogonality and angular head velocity. Here, we employ two metrics for reconstructing locomotor agility, radius of curvature dimensions and SCC orthogonality, in a sample of twelve fossil rodents from the families Ischyromyidae, Sciuridae and Aplodontidae. The method utilizing radius of curvature dimensions provided a reconstruction of fossil rodent locomotor behaviour that is more consistent with previous studies assessing fossil rodent locomotor behaviour compared to the method based on SCC orthogonality. Previous work on ischyromyids suggests that this group displayed a variety of locomotor modes. Members of Paramyinae and Ischyromyinae have relatively smaller SCCs and are reconstructed to be relatively slower compared to members of Reithroparamyinae. Early members of the Sciuroidea clade including the sciurid Cedromus wilsoni and the aplodontid Prosciurus relictus are reconstructed to be more agile than ischyromyids, in the range of extant arboreal squirrels. This reconstruction supports previous inferences that arboreality was likely an ancestral trait for this group. Derived members of Sciuridae and Aplodontidae vary in agility scores. The fossil squirrel Protosciurus cf. rachelae is inferred from postcranial material as arboreal, which is in agreement with its high agility, in the range of extant arboreal squirrels. In contrast, the fossil aplodontid Mesogaulus paniensis has a relatively low agility score, similar to the fossorial Aplodontia rufa, the only living aplodontid rodent. This result is in agreement with its postcranial reconstruction as fossorial and with previous indications that early aplodontids were more arboreal than their burrowing descendants.

New material of fossil rodents (Mammalia) from the Eocene (Bridgerian-Uintan) Washakie Formation, southcentral Wyoming

Eight species of rodents are described based on previously unreported fossil material from the early Eocene Adobe Town Member of the Washakie Formation of Wyoming. Among these are two new species: the sciuravid Pauromys turnbulli and the cylindrodont Pareumys flynni. The overall rodent fauna consists of twelve species. The greatest change in the rodent fauna is between the lower and middle units of the Adobe Town Member; six species having their last occurrence in the lower unit and three species having their first occurrence in the middle unit. This coincides with the boundary of the Bridgerian and Uintan North American Land Mammal Ages.

Fossil micromammals of the early Pliocene locality of Almenara MB: biostratigraphical and palaeoecological implications

In this work, we have studied the fossil rodent, insectivore and chiropteran faunas, of a new locality from the AlmenaraCasablanca karstic complex, named ACB MB (Castellón, east Spain). We consider an early Ruscinian age for this site, close to the Miocene/Pliocene boundary, and infer warm and relatively humid conditions from the analysis of the micromammal assemblage. We remark the presence of two species of Eliomys in ACB MB, rare in localities of this age, and the lack of any gerbil remains, fossil markers of faunal interchanges between Africa and Europe in the context of the Messinian Salinity Crisis, recorded in the nearby late Miocene site of ACB M

Paleo-metagenomics of North American fossil packrat middens: Past biodiversity revealed by ancient DNA.

Fossil rodent middens are powerful tools in paleoecology. In arid parts of western North America, packrat (Neotoma spp.) middens preserve plant and animal remains for tens of thousands of years. Midden contents are so well preserved that fragments of endogenous ancient DNA (aDNA) can be extracted and analyzed across millennia. Here, we explore the use of shotgun metagenomics to study the aDNA obtained from packrat middens up to 32,000 C14 years old. Eleven Illumina HiSeq 2500 libraries were successfully sequenced, and between 0.11% and 6.7% of reads were classified using Centrifuge against the NCBI “nt” database. Eukaryotic taxa identified belonged primarily to vascular plants with smaller proportions mapping to ascomycete fungi, arthropods, chordates, and nematodes. Plant taxonomic diversity in the middens is shown to change through time and tracks changes in assemblages determined by morphological examination of the plant remains. Amplicon sequencing of ITS2 and rbcL provided minimal data for some middens, but failed at amplifying the highly fragmented DNA present in others. With repeated sampling and deep sequencing, analysis of packrat midden aDNA from well‐preserved midden material can provide highly detailed characterizations of past communities of plants, animals, bacteria, and fungi present as trace DNA fossils. The prospects for gaining more paleoecological insights from aDNA for rodent middens will continue to improve with optimization of laboratory methods, decreasing sequencing costs, and increasing computational power.

REVISION OF THE MIOCENE CAVIOMORPH RODENTS FROM THE RÍO SANTA CRUZ (ARGENTINEAN PATAGONIA)

Fossil rodents from the Río Santa Cruz (RSC) classic localities (Santa Cruz Formation, Early–Middle Miocene) are known by the works of F. Ameghino and W.B. Scott since the end of the 19th and beginning of the 20th centuries. These caviomorph rodents have not been comprehensively reviewed since then. In this contribution, we studied new fossil specimens from the cliffs of the RSC (Province of Santa Cruz, Argentina) collected with accurate stratigraphic and geographic data during fieldtrips in 2013 and 2014. An increase in the caviomorph taxonomic richness is observed, based upon our taxonomic study of caviomorphs previously recorded in the RSC. Also, these fieldworks recovered for the first time several taxa previously found in other Santacrucian and even older Patagonian localities (Colhuehuapian, Early Miocene). As a general evolutionary pattern, we note an increase of derived euhypsodont taxa (Prolagostomus, Pliolagostomus, Schistomys, and Eocardia) in Segundas Barrancas Blancas (16.47–15.3 Ma). In addition, a taxonomic replacement of Phanomys by Schistomys is noted between Barrancas Blancas (17.21–16.3 Ma) and Segundas Barrancas Blancas, as well as a notably increase in the abundance of the large Perimys onustus in the latter locality. The present study provides a revision of the caviomorph systematics, and intends to be the starting point to understand the diversity (in all its aspects) and the evolution of this group during the Santacrucian, a major event in the South American mammalian history.