The Eastern European lithosphere is a natural laboratory to study continental formation and evolution through time, comprising Archean continental remnants, Proterozoic rifts and belts, and younger accreted terranes. We investigate the seismic structure of the East European Craton (EEC) crust and uppermost mantle, and the transition from Precambrian to Phanerozoic Europe across the Trans European Suture Zone (TESZ) using probabilistic transdimensional ambient noise tomography. We cross-correlate noise recorded at broadband seismic stations from Eastern, Northern, and Central Europe, remove earthquake signals using continuous wavelet transform, and extract Rayleigh wave phase velocity dispersion curves. We invert these for the highest resolution shear wave velocity model of the Eastern European lithosphere to date, using Markov chain Monte Carlo Bayesian inversion. Our shear wave velocity model exhibits spatial correlation with major tectonic units and bears similarities with active seismic survey profiles in terms of seismic velocity patterns and main discontinuities. The crust thickens across the TESZ boundary and the mantle is seismically faster than beneath younger terranes, consistent with a less dense Precambrian lithosphere in the EEC. The crust and lithosphere beneath the Pannonian region is hyper-extended but the adjacent Transylvanian basin crust shows significant heterogeneity. The Precambrian building blocks of the EEC exhibit contrasting seismic fabrics. The Baltic orogens of Fennoscandia are underlain by uniform crust with a flat Moho, while Sarmatia shows alternating high and low velocity layers and a regional south-dipping crustal boundary from beneath the Ukrainian Shield towards the Crimean Peninsula. The last observation supports a geodynamic style driven by horizontal rather than vertical tectonics, with fundamental implications for the formation and evolution of early continents.