Potential Fate Research Articles

Construction of biopolymer-based hydrogel beads for encapsulation, retention, and colonic delivery of tributyrin: Development of functional beverages (fortified bubble tea)

Tributyrin (TB) can be hydrolyzed into short chain fatty acids (butyric acid) in the gastrointestinal tract, which are claimed to exhibit beneficial health effects in the colon. However, digestion of tributyrin in the stomach and small intestine may promote its absorption in the upper gastrointestinal tract, thereby reducing its potential colonic health benefits. In this study, we therefore developed a novel method of encapsulating emulsified tributyrin within biopolymer-based hydrogel beads (≈ 800 μm) that were then encapsulated inside the boba beads (≈ 8–10 mm) found in bubble tea. The hydrogel beads were designed to retain and protect the tributyrin under upper gastrointestinal tract (GIT) conditions, but then release it within the colon. The concentration of tributyrin within the boba beads was 33.3 mg/g, which is above the value reported to exhibit health benefits. The morphology, encapsulation properties, water holding capacity, stability, and swelling properties of the tributyrin-loaded boba beads were characterized. Tapioca-based beads exhibited a larger degree of swelling when incubated in water for 12h (>95 %), whereas agar-based beads did not (< 20 %). In addition, the potential gastrointestinal fate of both free and encapsulated tributyrin oil droplets was assessed using an in vitro digestion model. The free tributyrin oil droplets were almost completely hydrolyzed (103.2 %) by the end of the small intestine phase, whereas the tributyrin oil droplets encapsulated within the agar-based (29.4 %) or tapioca-based (40.3 %) boba beads were much more resistant to digestion. The tapioca-based beads were partially broken down as they passed through the simulated GIT, while the agar-based beads maintained their structural integrity. The tapioca-based beads were gradually broken down as they passed through the simulated GIT, while the agar-based ones maintained their structural integrity. Agar beads were also harder, more resilient, and chewier than the tapioca ones. Both types of boba beads tended to swell and disintegrate when heated to high temperatures (90 °C), with the effect being more pronounced for the agar beads. Overall, our results suggest that the agar-based boba beads had greater potential for the delivery of tributyrin to the colon than the tapioca-based ones. The recent popularity of bubble tea means that it may be a suitable vehicle for delivering bioactive food components, like functional lipids, vitamins, nutraceuticals, or probiotics.

Cell cycle expression heterogeneity predicts degree of differentiation.

Methods that predict fate potential or degree of differentiation from transcriptomic data have identified rare progenitor populations and uncovered developmental regulatory mechanisms. However, some state-of-the-art methods are too computationally burdensome for emerging large-scale data and all methods make inaccurate predictions in certain biological systems. We developed a method in R (stemFinder) that predicts single cell differentiation time based on heterogeneity in cell cycle gene expression. Our method is computationally tractable and is as good as or superior to competitors. As part of our benchmarking, we implemented four different performance metrics to assist potential users in selecting the tool that is most apt for their application. Finally, we explore the relationship between differentiation time and cell fate potential by analyzing a lineage tracing dataset with clonally labelled hematopoietic cells, revealing that metrics of differentiation time are correlated with the number of downstream lineages.

Reconstruction of single-cell lineage trajectories and identification of diversity in fates during the epithelial-to-mesenchymal transition

Exploring the complexity of the epithelial-to-mesenchymal transition (EMT) unveils a diversity of potential cell fates; however, the exact timing and mechanisms by which early cell states diverge into distinct EMT trajectories remain unclear. Studying these EMT trajectories through single-cell RNA sequencing is challenging due to the necessity of sacrificing cells for each measurement. In this study, we employed optimal-transport analysis to reconstruct the past trajectories of different cell fates during TGF-beta-induced EMT in the MCF10A cell line. Our analysis revealed three distinct trajectories leading to low EMT, partial EMT, and high EMT states. Cells along the partial EMT trajectory showed substantial variations in the EMT signature and exhibited pronounced stemness. Throughout this EMT trajectory, we observed a consistent downregulation of the EED and EZH2 genes. This finding was validated by recent inhibitor screens of EMT regulators and CRISPR screen studies. Moreover, we applied our analysis of early-phase differential gene expression to gene sets associated with stemness and proliferation, pinpointing ITGB4, LAMA3, and LAMB3 as genes differentially expressed in the initial stages of the partial versus high EMT trajectories. We also found that CENPF, CKS1B, and MKI67 showed significant upregulation in the high EMT trajectory. While the first group of genes aligns with findings from previous studies, our work uniquely pinpoints the precise timing of these upregulations. Finally, the identification of the latter group of genes sheds light on potential cell cycle targets for modulating EMT trajectories.

Cell cycle expression heterogeneity predicts degree of differentiation.

Methods that predict fate potential or degree of differentiation from transcriptomic data have identified rare progenitor populations and uncovered developmental regulatory mechanisms. However, some state-of-the-art methods are too computationally burdensome for emerging large-scale data and all methods make inaccurate predictions in certain biological systems. We developed a method in R (stemFinder) that predicts single cell differentiation time based on heterogeneity in cell cycle gene expression. Our method is computationally tractable and is as good as or superior to competitors. As part of our benchmarking, we implemented four different performance metrics to assist potential users in selecting the tool that is most apt for their application. Finally, we explore the relationship between differentiation time and cell fate potential by analyzing a lineage tracing dataset with clonally labelled hematopoietic cells, revealing that metrics of differentiation time are correlated with the number of downstream lineages.

TrajectoryGeometry suggests cell fate decisions can involve branches rather than bifurcations.

Differentiation of multipotential progenitor cells is a key process in the development of any multi-cellular organism and often continues throughout its life. It is often assumed that a bi-potential progenitor develops along a (relatively) straight trajectory until it reaches a decision point where the trajectory bifurcates. At this point one of two directions is chosen, each direction representing the unfolding of a new transcriptional programme. However, we have lacked quantitative means for testing this model. Accordingly, we have developed the R package TrajectoryGeometry. Applying this to published data we find several examples where, rather than bifurcate, developmental pathways branch. That is, the bipotential progenitor develops along a relatively straight trajectory leading to one of its potential fates. A second relatively straight trajectory branches off from this towards the other potential fate. In this sense only cells that branch off to follow the second trajectory make a 'decision'. Our methods give precise descriptions of the genes and cellular pathways involved in these trajectories. We speculate that branching may be the more common behaviour and may have advantages from a control-theoretic viewpoint.

Health and Environmental Impact of Xenobiotics in Water Quality Evaluation: A Review

Study’s Novelty/Excerpt This review presents a comprehensive categorization and impact analysis of xenobiotics on humans, animals, and the environment, providing a novel synthesis of current knowledge in this field. It details the diverse sources of xenobiotics, such as microplastics and pesticides, and their pervasive presence in various environmental compartments, highlighting the significant issue of surface runoff contributing to pesticide residue in surface waters. Additionally, the review innovatively integrates a discussion on advanced detection and removal techniques, including cutting-edge chromatographic methods and bioremediation strategies, offering a holistic approach to understanding and managing xenobiotic pollutants. Full Abstract Xenobiotics are compounds or chemicals to which an organism is exposed, usually in large concentrations that are inessential to the regular pattern of metabolism of that organism. This review emphasised the categorization and impact of xenobiotics on people, animals, and the environment. It also gave a general overview of the process of discharging and detecting xenobiotics and their potential environmental fates. A chart of xenobiotic categories was also provided, including industrial products, insecticides, pharmaceuticals, personal care items, and radioactive waste. Microplastics and pesticides were discussed as xenobiotic chemicals commonly found in freshwater bodies; similarly, the impact of creating substances such as personal care products, medicinal chemicals, and insecticides through technology was discussed as the source of xenobiotics. Additionally, a thorough description of how pesticide pollution affects common environmental compartments such as soils, streambed sediment, groundwater, and surface water is provided since surface runoff accounts for more than 10% of pesticide residue in surface rivers. Effective techniques, including Fourier Transform Infrared (FTIR), High-Performance Liquid Chromatography (HPLC), Ultra-Performance Liquid Chromatography (UPLC), Gas Chromatography-Mass Spectrometry GC/MS, and Atomic Absorption Spectroscopy (AAS) along with diverse chromatographic techniques were also discussed as techniques for the analysis of xenobiotics. These techniques are often paired with state-of-the-art detection techniques like high-resolution mass spectrometry (HRMS). Highlighted as well were techniques for the removal of xenobiotics using membrane processes, improved oxidation processes, engineered wetlands, photocatalytic degradation, biotransformation, bioremediation, photo-remediation, adsorption, and bioremediation to decrease the side effects.

Direct Observation of Magnetic Reconnection Resulting From Interaction Between Magnetic Flux Rope and Magnetic Hole in the Earth's Magnetosheath

AbstractWe report in situ observation of magnetic reconnection between magnetic flux rope (MFR) and magnetic hole (MH) in the magnetosheath by the Magnetospheric Multiscale mission. The MFR was rooted in the magnetopause and could be generated by magnetopause reconnection therein. A thin current sheet was generated due to the interaction between MFR and MH. The sub‐Alfvénic ion bulk flow and the Hall field were detected inside this thin current sheet, indicating an ongoing reconnection. An elongated electron diffusion region characterized by non‐frozen‐in electrons, magnetic‐to‐particle energy conversion, and crescent‐shaped electron distribution was detected in the reconnection exhaust. The observation provides a mechanism for the dissipation of MFRs and thus opens a new perspective on the evolution of MFRs at the magnetopause. Our work also reveals one potential fate of the MHs in the magnetosheath which could reconnect with the MFRs and further merge into the magnetopause.

MiR-137 confers robustness to the territorial restriction of the neural plate border.

The neural plate border (NPB) of vertebrate embryos is segregated from the neural plate (NP) and epidermal regions, and comprises an intermingled group of progenitors with multiple fate potential. Recent studies have shown that, during the gastrula stage, TFAP2A acts as a pioneer factor in remodeling the epigenetic landscape required to activate components of the NPB induction program. Here, we show that chick Tfap2a has two highly conserved binding sites for miR-137, and both display a reciprocal expression pattern at the NPB and NP, respectively. In addition, ectopic miR-137 expression reduced TFAP2A, whereas its functional inhibition expanded their territorial distribution overlapping with PAX7. Furthermore, we demonstrate that loss of the de novo DNA methyltransferase DNMT3A expanded miR-137 expression to the NPB. Bisulfite sequencing revealed a markedly elevated presence of non-canonical CpH methylation within the miR-137 promoter region when comparing NPB and NP samples. Our findings show that miR-137 contributes to the robustness of NPB territorial restriction in vertebrate development.

Measuring the Fate and Natural Attenuation Potential of a Viscous Marine Fuel on an Artificial Beach Mesocosm

Shoreline oiling poses a risk to coastal ecosystems and resources. Understanding the natural attenuation potential and impact of different sediment types is important for choosing appropriate intervention strategies and priority areas following a spill. Simulated IFO-40 oil spills on artificial beach mesocosms were carried out using different sediment types: sandy beach and sandy tidal flat, under low energy tidal cycles over a 5-day period. Chemical and biological analysis of leachate and sediment was conducted to understand the movement of oil through these mesocosms. Rapid oil movement from the oil slick to the surface sediment layer was observed in the sandy beach enclosures, while slower oil movement was observed in the sandy tidal flat enclosures. Increased hydrocarbon dissolution was observed in the sandy beach enclosures, marked by higher concentrations of low molecular weight n-Alkanes (C12 − 15) and naphthalenes (C0 − 3) in sandy beach leachate compared to sandy tidal flat samples. Despite the increase in hydrocarbons, there were no major shifts in microbial communities observed in the leachate and sediment compartments for either sediment type. Both prokaryote and microeukaryote communities differed between the two sediment types, with little overlap between dominant sequences. Our results indicate that limited oil penetration occurs within sandy tidal flat shorelines resulting in oil accumulation suggesting that sorbent or vacuuming could be used as emergency response to minimize the environmental and ecological impacts of spilled oil.

The fate and biostimulant potential of metal lactates in silt loam soil

AbstractConventional farming practices have negatively impacted micronutrient fertility and overall soil health. Metal lactates are an organic micronutrient amendment that provide both a labile carbon substrate as well as mineral nutrition for plant and microbial growth. To determine the ability of metal lactates to provide readily available micronutrients, Zn, Cu, Mn, Ni, and Co in lactate and chloride salt form were amended to soils and incubated for 28 days. Operationally defined speciation was determined using sequential extraction on samples incubated for 1, 5, or 28 days. The results show a comparable distribution of metals in chloride and lactate form; however, differences were detected in water‐soluble and exchangeable Ni and Zn at each timepoint. For example, in the water exchangeable fraction, there was 2.6%–2.9% less Ni and 0.2%–0.3% less Zn in the metal lactate‐treated soil compared to soil treated with metal chlorides. Furthermore, carbonate‐bound Ni averaged 4.1% and 4% less in metal lactate‐treated soils as compared to metal chloride‐treated soils on days 1 and 5, and Cu decreased 2.9%–3.3% during the treatment period for the lactate‐bound form. Additionally, microbial phospholipid fatty acid (PLFA) was performed and found a stimulatory effect of metal lactates on bacterial biomass with an increase of 12%–18% relative to the metal chloride treatment. Results from this study support the use of metal lactates as a sustainable alternative to conventional fertilizers by providing bioavailable micronutrients for plant nutrition in addition to a labile carbon source to support the growth of microbial populations.

Potential routes of plastics biotransformation involving novel plastizymes revealed by global multi-omic analysis of plastic associated microbes

Despite increasing efforts across various disciplines, the fate, transport, and impact of synthetic plastics on the environment and public health remain poorly understood. To better elucidate the microbial ecology of plastic waste and its potential for biotransformation, we conducted a large-scale analysis of all publicly available meta-omic studies investigating plastics (n = 27) in the environment. Notably, we observed low prevalence of known plastic degraders throughout most environments, except for substantial enrichment in riverine systems. This indicates rivers may be a highly promising environment for discovery of novel plastic bioremediation products. Ocean samples associated with degrading plastics showed clear differentiation from non-degrading polymers, showing enrichment of novel putative biodegrading taxa in the degraded samples. Regarding plastisphere pathogenicity, we observed significant enrichment of antimicrobial resistance genes on plastics but not of virulence factors. Additionally, we report a co-occurrence network analysis of 10 + million proteins associated with the plastisphere. This analysis revealed a localized sub-region enriched with known and putative plastizymes—these may be useful for deeper investigation of nature’s ability to biodegrade man-made plastics. Finally, the combined data from our meta-analysis was used to construct a publicly available database, the Plastics Meta-omic Database (PMDB)—accessible at plasticmdb.org. These data should aid in the integrated exploration of the microbial plastisphere and facilitate research efforts investigating the fate and bioremediation potential of environmental plastic waste.

Dimethylcyclosiloxanes in Mobile Smart Terminal Devices: Concentrations, Distributions, Profiles, and Environmental Emissions.

Dimethylcyclosiloxanes (DMCs) are utilized as vital monomers in the synthesis of organosilicon compounds, integral to the manufacture of mobile smart terminal devices. Toxicological studies have revealed potential endocrine-disrupting activity, reproductive toxicity, neurotoxicity, and other toxicities of the DMCs. This study investigated the concentrations and composition profiles of seven DMCs, including hexamethylcyclotrisiloxane (D3), octamethylcyclotetrasiloxane (D4), decamethylcyclopentasiloxane (D5), dodecamethylcyclohexasiloxane (D6), and tetradecamethylcycloheptasiloxane (D7), hexadecamethylcyclooctasiloxane (D8), and octadecamethylcyclononasiloxane (D9) in three types of mobile smart terminal device components (silicone rubber, adhesive, and plastics). Environmental emissions of DMCs from silicone rubber materials were also estimated to improve the recognition of their potential fate within the environment. D5-D9 were widely present in silicone rubber and adhesives with detection rates ranging from 91-95.5% and 50-100%, respectively, while D3 and D4 were more frequently detected in plastics, both showing a detection rate of 61.1%. Silicone rubber had the highest total DMCs (∑7DMCs) and a concentration of 802.2 mg/kg, which were dominated by D7, D8, and D9. DMCs detected in adhesives were dominated by D4, D5, and D6. The estimated emission of ∑DMCs released into the environment in China from silicone rubber used in mobile smart terminal devices exceeds 5000 tons per year. Further studies are needed on the presence of DMCs in various commodities and environmental media to assess their ecological and human health impacts, as well as the toxicological effects of D7-D9 for the appropriate regulation of these chemicals.

Spatiotemporal dynamics of dissolved organic matter in subtropical karst cave waters identified by optical properties

Natural dissolved organic matter (DOM) is ubiquitous in aquatic environments and is an essential component in the carbon cycle in karst areas. To improve understanding of the carbon cycle in karst caves with heterogeneous hydrological processes, we examined the spatiotemporal variability of DOM composition and further uncovered its source and fate. Results may also provide insights into the feedbacks of organic carbon to carbon sinks in karst regions. In this study, concentrations and compositions of DOM, partial pressure of aqueous carbon dioxide (pCO2), dissolved inorganic carbon, and other physicochemical parameters were investigated in a karst cave at Mahuang, Southwest China. Ultraviolet-visible absorption spectroscopy was coupled with multiple statistical analyses to identify the compositional variations and potential fates of DOM in cave waters. The results showed that DOM dynamics were regulated by both terrigenous and biogenic drivers under the control of meteorological conditions. With higher air temperature, precipitation, and microbial activity, fulvic fractions were consumed to generate CO2, leading to the accumulation of refractory DOM in cave waters and changing the hydrochemical features. When temperature and precipitation decreased, DOM was dominated by lignin fractions, which served as an indicator of terrestrial inputs and vascular plants, suggesting variation in the preferential fraction of biological consumption. In addition, different hydrological path patterns influenced DOM properties in cave waters due to differences in recharging, the leaching process, and subsurface reworking. Thus, hydrology could serve as an important constraint on the coupling between dissolved organic and inorganic carbon.

Role of particle size-dependent copper bioaccumulation-mediated oxidative stress on Glycine max (L.) yield parameters with soil-applied copper oxide nanoparticles

Increased impetus on the application of nano-fertilizers to improve sustainable food production warrants understanding of nanophytotoxicity and its underlying mechanisms before its application could be fully realized. In this study, we evaluated the potential particle size-dependent effects of soil-applied copper oxide nanoparticles (nCuO) on crop yield and quality attributes (photosynthetic pigments, seed yield and nutrient quality, seed protein, and seed oil), including root and seed Cu bioaccumulation and a suite of oxidative stress biomarkers, in soybean (Glycine max L.) grown in field environment. We synthesized three distinct sized (25 nm = S [small], 50 nm = M [medium], and 250 nm = L [large]) nCuO with same surface charge and compared with soluble Cu2+ ions (CuCl2) and water-only controls. Results showed particle size-dependent effects of nCuO on the photosynthetic pigments (Chla and Chlb), seed yield, potassium and phosphorus accumulation in seed, and protein and oil yields, with nCuO-S showing higher inhibitory effects. Further, increased root and seed Cu bioaccumulation led to concomitant increase in oxidative stress (H2O2, MDA), and as a response, several antioxidants (SOD, CAT, POX, and APX) increased proportionally, with nCuO treatments including Cu2+ ion treatment. These results are corroborated with TEM ultrastructure analysis showing altered seed oil bodies and protein storage vacuoles with nCuO-S treatment compared to control. Taken together, we propose particle size-dependent Cu bioaccumulation-mediated oxidative stress as a mechanism of nCuO toxicity. Future research investigating the potential fate of varied size nCuO, with a focus on speciation at the soil-root interface, within the root, and edible parts such as seed, will guide health risk assessment of nCuO.Graphical

Fatty Acid Release and Gastrointestinal Oxidation Status: Different Methods of Processing Flaxseed.

Flaxseed has been recognized as a superfood worldwide due to its abundance of diverse functional phytochemicals and nutrients. Various studies have shown that flaxseed consumption is beneficial to human health, though methods of processing flaxseed may significantly affect the absorption and metabolism of its bioactive components. Hence, flaxseed was subjected to various processing methods including microwaving treatment, microwave-coupled dry milling, microwave-coupled wet milling, and high-pressure homogenization. In vitro digestion experiments were conducted to assess the impact of these processing techniques on the potential gastrointestinal fate of flaxseed oil. Even though more lipids were released by the flaxseed at the beginning of digestion after it was microwaved and dry-milled, the full digestion of flaxseed oil was still restricted in the intestine. In contrast, oil droplets were more evenly distributed in wet-milled flaxseed milk, and there was a greater release of fatty acids during simulated digestion (7.33 ± 0.21 μmol/mL). Interestingly, wet-milled flaxseed milk showed higher oxidative stability compared with flaxseed powder during digestion despite the larger specific surface area of its oil droplets. This study might provide insight into the choice of flaxseed processing technology for better nutrient delivery efficiency.

Fates of Terrigenous Dissolved Organic Carbon in the Gulf of Maine.

A significant amount of organic carbon is transported in dissolved form from soils to coastal oceans via inland water systems, bridging land and ocean carbon reservoirs. However, it has been discovered that the presence of terrigenous dissolved organic carbon (tDOC) in oceans is relatively limited. Therefore, understanding the fates of tDOC in coastal oceans is essential to account for carbon sequestration through land ecosystems and ensure accurate regional carbon budgeting. In this study, we developed a state-of-the-art modeling approach by coupling a land-to-ocean tDOC flux simulation model and a coastal tDOC tracking model to determine the potential fates of tDOC exported from three primary drainage basins in the Gulf of Maine (GoM). According to our findings, over half a year in the GoM, 56.4% of tDOC was mineralized. Biomineralization was responsible for 90% of that amount, with the remainder attributed to photomineralization. Additionally, 37% of the tDOC remained suspended in the GoM, and 6.6% was buried in the marine sediment.

Compound extreme inundation risk of coastal wetlands caused by climate change and anthropogenic activities in the Yellow River Delta, China

The coastal wetlands of the Yellow River Delta (YRD) in China are crucial for their valuable resources, environmental significance, and economic contributions. However, these wetlands are also vulnerable to the dual threats of climate change and human disturbances. Despite substantial attention to the historical shifts in YRD's coastal wetlands, uncertainties remain regarding their future trajectory in the face of compound risks from climate change and anthropogenic activities. Based on a range of remote sensing data sources, this study undertakes a comprehensive investigation into the evolution of YRD's coastal wetlands between 2000 and 2020. Subsequently, the potential fate of coastal wetlands is thoroughly analyzed through the Land Use/Cover Change (LUCC) simulation using System Dynamic-Future Land Use Simulation (SD-FLUS) model and the extreme water levels projection integrated future sea-level rise, storm surge, and astronomical high tide in 2030, 2050, and 2100 under scenarios of SSP1-2.6, SSP2-4.5, and SSP5-8.5. Results revealed that YRD's coastal wetlands underwent a marked reduction, shrinking by 1688.72 km2 from 2000 to 2020. This decline was mostly attributed to the substantial expansion in the areas of artificial wetlands (increasing by 823.78 km2), construction land (increasing by 767.71 km2), and shallow water (increasing by 274.58 km2). Looking ahead to 2030–2100, the fate of coastal wetlands appears to diverge based on different scenarios. Under the SSP1-2.6 scenario, the area of coastal wetland is projected to experience considerable growth. In contrast, the SSP5-8.5 scenario anticipates a notable decrease in coastal wetlands. Relative to the inundated area suffered from the current extreme water levels, the study projects a decrease of 6.8%–10.6% in submerged coastal wetlands by 2030 and 9.4%–18.2% by 2050 across all scenarios. In 2100, these percentages are projected to decrease by 0.4 % (SSP2-4.5) and 27.1% (SSP5-8.5), but increase by 35.7% (SSP1-2.6). Results suggest that coastal wetlands in the YRD will face a serious compound risk from climate change and intensified human activities in the future, with climate change being the dominant factor. More efficient and forward-looking measures must be implemented to prioritize the conservation and management of coastal wetland ecosystems to address the challenges, especially those posed by climate change.

Cell fate decision in erythropoiesis: Insights from multiomics studies

Every second, the body produces 2 million red blood cells through a process called erythropoiesis. Erythropoiesis is hierarchical in that it results from a series of cell fate decisions whereby hematopoietic stem cells progress toward the erythroid lineage. Single-cell transcriptomic and proteomic approaches have revolutionized the way we understand erythropoiesis, revealing it to be a gradual process that underlies a progressive restriction of fate potential driven by quantitative changes in lineage-specifying transcription factors. Despite these major advances, we still know very little about what cell fate decision entails at the molecular level. Novel approaches that simultaneously measure additional properties in single cells, including chromatin accessibility, transcription factor binding, and/or cell surface proteins are being developed at a fast pace, providing the means to exciting new advances in the near future. In this review, we briefly summarize the main findings obtained from single-cell studies of erythropoiesis, highlight outstanding questions, and suggest recent technological advances to address them.

The end game(s) of photosynthetic carbon metabolism.

The year 2024 marks 70 years since the general outline of the carbon pathway in photosynthesis was published. Although several alternative pathways are now known, it is remarkable how many organisms use the reaction sequence described 70 yrs ago, which is now known as the Calvin-Benson cycle or variants such as the Calvin-Benson-Bassham cycle or Benson-Calvin cycle. However, once the carbon has entered the Calvin-Benson cycle and is converted to a 3-carbon sugar, it has many potential fates. This review will examine the last stages of photosynthetic metabolism in leaves. In land plants, this process mostly involves the production of sucrose provided by an endosymbiont (the chloroplast) to its host for use and transport to the rest of the plant. Photosynthetic metabolism also usually involves the synthesis of starch, which helps maintain respiration in the dark and enables the symbiont to supply sugars during both the day and night. Other end products made in the chloroplast are closely tied to photosynthetic CO2 assimilation. These include serine from photorespiration and various amino acids, fatty acids, isoprenoids, and shikimate pathway products. I also describe 2 pathways that can short circuit parts of the Calvin-Benson cycle. These final processes of photosynthetic metabolism play many important roles in plants.

Aggregation behavior of polystyrene nanoplastics: Role of surface functional groups and protein and electrolyte variation

Aggregation kinetics of plastics are affected by the surface functional groups and exposure orders (electrolyte and protein) with kinds of mechanisms in aquatic environment. This study investigates the aggregation of polystyrene nanoplastics (PSNPs) with varying surface functional groups in the presence of common electrolytes (NaCl, CaCl2, Na2SO4) and bovine serum albumin (BSA). It also examines the impact of different exposure orders, namely BSA + NaCl (adding them together), BSA → NaCl (adding BSA firstly and then NaCl), and NaCl → BSA (adding NaCl firstly and then BSA), on PSNPs aggregation. The presence of BSA decreased the critical coagulation concentration in NaCl (CCCNa+) of the non-modified PS-Bare from 222.17 to 142.81 mM (35.72%), but increased that of the carboxyl-modified PS-COOH from 157.34 to 160.03 mM (1.71%). This might be ascribed to the thicker absorbed layer of BSA onto the PS-Bare surface, known from Ohshima's soft particle theory. Their aggregation in CaCl2 was both increased because of Ca2+ bridging. Different from the monotonous effects of BSA on PS-Bare and PS-COOH, BSA initially facilitated PS-NH2 aggregation via patch-charge attraction, then inhibited it at higher salt levels through steric repulsion. Furthermore, exposure orders had no significant effect on PS-Bare and PS-COOH, but had a NaCl concentration-dependent impact on PS-NH2. At the low NaCl concentrations (10 and 100 mM), no obvious influence could be observed. While, at 300 mM NaCl, the high concentrations of BSA could not totally stabilize the salt-induced aggregates in NaCl → BSA, but could achieve it in the other two orders. These might be attributed to the electrical double layer compression by NaCl, “patch-charge” force and steric hindrance by BSA. These experimental findings shed light on the potential fate and transport of nanoparticles in aquatic environments.