Photosynthetic dinoflagellates are one of the major microalgal taxa, playing essential roles in biogeochemical cycles and food webs in aquatic environments. Some freshwater dinoflagellates are known to be sensitive to environmental conditions, like water quality and contaminants; however, their molecular toxicological responses are insufficiently discovered. In the present study, we evaluated the physiological and transcriptomic responses of the freshwater dinoflagellate Palatinus apiculatus exposed to cadmium (Cd), focusing on stress-responsive genes. The cell number of P. apiculatus decreased significantly at Cd concentrations above 0.25 mg/L after 72 h, with an estimated EC50 value of 1.35 mg/L. In addition, we constructed 87,207 transcriptomic contigs from the P. apiculatus cells exposed to the Cd. Differential expression gene analysis showed that 21.0 % of total contigs were statistically significant, including 8647 up-regulated and 4195 down-regulated genes. Gene Ontology enrichment results revealed that genes responsive to stress and external stimuli were highly expressed in Cd-treated cells. Moreover, Cd significantly induced reactive oxygen species (ROS) production in P. apiculatus cells, and their patterns were similar to the expressions of certain antioxidant genes. Among the selected genes, GR expression levels were down-regulated, which may lead to the failure of cell defense against heavy metals. These results showed molecular defense pathways of the freshwater dinoflagellate P. apiculatus against the heavy metal that could be served as potential sensitive biomarkers for evaluating molecular toxicity in freshwater ecosystems.
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