Mutualistic interactions are key to biodiversity generation and maintenance, being pollination and seed dispersal interactions essential for plant reproduction. However, anthropogenic habitat disturbance can alter these interactions. We studied the regional and local effects of habitat disturbance on two generalist mutualist animals of southern Chile temperate rainforests: the hummingbird Sephanoides sephaniodes and the marsupial Dromiciops gliroides, which perform key roles as pollinator and seed disperser, respectively. We sampled 12 sites corresponding to four disturbance conditions (mature native forest, secondary forest, native forest under selective logging, and exotic forest plantations) in which we estimated the number of S. sephaniodes and D. gliroides records (as a proxy of relative abundance) using camera traps. We measured seven habitat structure variables at each site, known to influence their occurrence. Specifically, we examined S. sephaniodes and D. gliroides abundance variation at (i) a regional scale (among disturbance conditions) and (ii) at a local scale (among sampling sites). Dromiciops gliroides abundance decreased as disturbance increased, but S. sephaniodes abundance was highly variable. At the local scale, S. sephaniodes and D. gliroides abundances were largely variable among sites, influenced by habitat structural features, such as bamboo and shrub cover and woody debris. Our results show that although habitat disturbance may influence mutualist abundances, they can tolerate disturbance if minimum structure and resource requirements are met, but respond idiosyncratically to local conditions. Examining local-scale variability may provide valuable information on ecological processes, which often goes unnoticed when local sites are considered as replicates in landscape-level studies.